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dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
To display 3D structure, download Cn3D
67 variations mapped to protein NP_003233
PDB Blast Result: View Alignment
Protein:
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Structure Neighbor:
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dbSNP

SnpID Position
protein
Amino
Acid
Amino
Acid
Amino
Acid

Position
neighbor
Cn3D
rs18429715025840
rs13907898426848
rs20067976427652
rs37470813328460
rs14603010430581
rs2893456830884
rs20216873530985
rs5575131531389
rs20036138731389
rs3483381231591
rs320974231692
rs193922666328104
rs148665451329105
rs376752333329105
rs2229102333109
rs17854016335111
rs104893812336112
rs144701411348124
rs369450067348124
rs113194608354130
rs104893813355131
rs199660234356132
rs104893814357133
rs370995723357133
rs189119533360136
rs149195553364140
rs375165766367143
rs35719192373149
rs193922660384161
rs193922661384161
rs111319732385162
rs137908708385162
rs35766612387164
rs35766612387164
rs193922662388165
rs2228048389166
rs193922663395172
rs187049329402179
rs143095746403180
rs369151798413190
rs2228047422197
rs104893817425200
rs104893818427202
rs1050833439214
rs104893807449223
rs104893811460234
rs104893816460234
rs201484143463237
rs144766594465240
rs185502982484259
rs139881155486261
rs141113059490265
rs104893819495270
rs200958264497272
rs121918715508283
rs193922664514289
rs140662877516291
rs149847376516291
rs370708687516291
rs121918714526301
rs104893810528303
rs104893815528303
rs201601508529304
rs140818646534309
rs104893809537312
rs369806947540315
rs375226321542317

Cn3D: Synonymous Nonsynonymous
Additional Links:  MMDB Database CDD Database DART Database
67 variations mapped to protein NP_001020018
PDB Blast Result: View Alignment
Protein:
||
Structure Neighbor:
||


dbSNP

SnpID Position
protein
Amino
Acid
Amino
Acid
Amino
Acid

Position
neighbor
Cn3D
rs18429715028340
rs13907898429348
rs20067976430152
rs37470813330960
rs14603010433081
rs2893456833384
rs20216873533485
rs5575131533889
rs20036138733889
rs3483381234091
rs320974234192
rs193922666353104
rs148665451354105
rs376752333354105
rs2229102358109
rs17854016360111
rs104893812361112
rs144701411373124
rs369450067373124
rs113194608379130
rs104893813380131
rs199660234381132
rs104893814382133
rs370995723382133
rs189119533385136
rs149195553389140
rs375165766392143
rs35719192398149
rs193922660409161
rs193922661409161
rs111319732410162
rs137908708410162
rs35766612412164
rs35766612412164
rs193922662413165
rs2228048414166
rs193922663420172
rs187049329427179
rs143095746428180
rs369151798438190
rs2228047447197
rs104893817450200
rs104893818452202
rs1050833464214
rs104893807474223
rs104893811485234
rs104893816485234
rs201484143488237
rs144766594490240
rs185502982509259
rs139881155511261
rs141113059515265
rs104893819520270
rs200958264522272
rs121918715533283
rs193922664539289
rs140662877541291
rs149847376541291
rs370708687541291
rs121918714551301
rs104893810553303
rs104893815553303
rs201601508554304
rs140818646559309
rs104893809562312
rs369806947565315
rs375226321567317

Cn3D: Synonymous Nonsynonymous
Additional Links:  MMDB Database CDD Database DART Database

Position protein
Contig reference residue from the translated XP_ protein. Position is given on the protein sequence.
Amino Acid
Residue on the contig reference, variant residue specified by one or more alleles for a variation record in dbSNP (synonymous or nonsynonymous), or the corresponding residue on the neighbored protein with structure information, respectively.
Position neighbor
Position of the variant amino acid on the protein sequence with structure information. The alignment between the contig protein and its neighbor structure can be viewed in Cn3D or by selecting the 'view alignment' button above.
Cn3D
Check box to include the selected variation in the set of highlighted positions in the Cn3D export file.

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