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| env | gag | nef | pol | rev | tat | vif | vpr | vpu |
| Tat | acetylated by | CREB binding protein isoform a  |
| E1A binding protein p300 | ||
| GCN5 general control of amino-acid synthesis 5-like 2 | ||
| p300/CBP-associated factor | ||
| acetylates | nuclear factor kappa-B, subunit 1 | |
| v-rel reticuloendotheliosis viral oncogene homolog A, nuclear factor of kappa light polypeptide gene enhancer in B-cells 3, p65 | ||
| activated by | interleukin 2 precursor | |
| interleukin 6 (interferon, beta 2) | ||
| retinoblastoma 1 | ||
| suppressor of Ty 4 homolog 1 | ||
| tumor necrosis factor alpha | ||
| activates | 2',3'-cyclic nucleotide 3' phosphodiesterase | |
| AMP-activated protein kinase gamma2 subunit isoform a | ||
| AMP-activated protein kinase, noncatalytic gamma-1 subunit isoform 1 | ||
| c-src tyrosine kinase | ||
| cAMP responsive element binding protein 1 isoform A | ||
| cAMP responsive element modulator isoform v | ||
| cAMP-dependent protein kinase catalytic subunit alpha isoform 1 | ||
| cAMP-dependent protein kinase catalytic subunit beta isoform 1 | ||
| cAMP-dependent protein kinase, regulatory subunit alpha 1 | ||
| cAMP-dependent protein kinase, regulatory subunit alpha 2 | ||
| cAMP-dependent protein kinase, regulatory subunit beta 2 | ||
| cAMP-specific phosphodiesterase 4D | ||
| caspase 3 preproprotein | ||
| CCAAT/enhancer binding protein beta | ||
| chemokine (C-C motif) receptor 2 isoform B | ||
| CREB binding protein isoform a | ||
| cyclin E1 isoform 1 | ||
| cyclin-dependent kinase 2 isoform 1 | ||
| cyclin-dependent kinase 9 | ||
| cyclin-dependent kinase inhibitor 1A | ||
| cytoplasmic nuclear factor of activated T-cells 3 isoform 1 | ||
| cytoplasmic nuclear factor of activated T-cells 4 | ||
| DNA directed RNA polymerase II polypeptide K | ||
| DNA directed RNA polymerase II polypeptide L | ||
| DNA directed RNA polymerase III polypeptide K | ||
| DNA-directed RNA polymerase III 39 kDa polypeptide F | ||
| E1A binding protein p300 | ||
| endonuclease G precursor | ||
| eukaryotic translation initiation factor 2-alpha kinase 2 | ||
| fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) | ||
| general transcription factor IIIC, polypeptide 1, alpha 220kDa | ||
| general transcription factor IIIC, polypeptide 2, beta 110kDa | ||
| general transcription factor IIIC, polypeptide 3, 102kDa | ||
| general transcription factor IIIC, polypeptide 4, 90kDa | ||
| general transcription factor IIIC, polypeptide 5, 63kDa | ||
| glucose-6-phosphate dehydrogenase isoform a | ||
| glutamate receptor, ionotropic, N-methyl-D-aspartate 3A | ||
| glutamate receptor, ionotropic, N-methyl-D-aspartate 3B | ||
| glutamate receptor, metabotropic 1 | ||
| glycogen synthase kinase 3 beta | ||
| integrin alpha 3 isoform a precursor | ||
| integrin alpha 5 precursor | ||
| jun oncogene | ||
| kinase insert domain receptor (a type III receptor tyrosine kinase) | ||
| lymphocyte-specific protein tyrosine kinase precursor | ||
| matrix metalloproteinase 1 preproprotein | ||
| mitogen-activated protein kinase 1 | ||
| mitogen-activated protein kinase 3 isoform 1 | ||
| mitogen-activated protein kinase 8 isoform JNK1 alpha2 | ||
| mitogen-activated protein kinase kinase 1 | ||
| mitogen-activated protein kinase kinase 2 | ||
| N-methyl-D-aspartate receptor subunit 2A precursor | ||
| N-methyl-D-aspartate receptor subunit 2B precursor | ||
| N-methyl-D-aspartate receptor subunit 2C precursor | ||
| N-methyl-D-aspartate receptor subunit 2D precursor | ||
| NMDA receptor 1 isoform NR1-1 precursor | ||
| nuclear factor kappa-B, subunit 1 | ||
| nuclear factor of activated T-cells, cytosolic component 1 isoform A | ||
| nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 isoform b | ||
| pancreas-enriched phospholipase C | ||
| phosphodiesterase 10A | ||
| phosphodiesterase 11A isoform 4 | ||
| phosphodiesterase 1A, calmodulin-dependent isoform 1 | ||
| phosphodiesterase 1B, calmodulin-dependent | ||
| phosphodiesterase 1C, calmodulin-dependent 70kDa | ||
| phosphodiesterase 2A, cGMP-stimulated | ||
| phosphodiesterase 3A, cGMP-inhibited | ||
| phosphodiesterase 3B, cGMP-inhibited | ||
| phosphodiesterase 4A, cAMP-specific (phosphodiesterase E2 dunce homolog, Drosophila) | ||
| phosphodiesterase 4B, cAMP-specific isoform 1 | ||
| phosphodiesterase 4C, cAMP-specific (phosphodiesterase E1 dunce homolog, Drosophila) | ||
| phosphodiesterase 7A isoform a | ||
| phosphodiesterase 8A isoform 1 | ||
| phosphoinositide-3-kinase, catalytic, alpha polypeptide | ||
| phosphoinositide-3-kinase, catalytic, beta polypeptide | ||
| phosphoinositide-3-kinase, catalytic, delta polypeptide | ||
| phosphoinositide-3-kinase, catalytic, gamma polypeptide | ||
| phosphoinositide-3-kinase, class 2, alpha polypeptide | ||
| phosphoinositide-3-kinase, class 2, beta polypeptide | ||
| phosphoinositide-3-kinase, class 2, gamma polypeptide | ||
| phosphoinositide-3-kinase, class 3 | ||
| phosphoinositide-3-kinase, regulatory subunit 2 (p85 beta) | ||
| phosphoinositide-3-kinase, regulatory subunit, polypeptide 1 isoform 1 | ||
| phosphoinositide-specific phospholipase C beta 1 isoform a | ||
| phospholipase C beta 4 isoform a | ||
| phospholipase C delta 3 | ||
| phospholipase C gamma 1 isoform a | ||
| phospholipase C, beta 2 | ||
| phospholipase C, beta 3 (phosphatidylinositol-specific) | ||
| phospholipase C, delta 1 | ||
| phospholipase C, delta 4 | ||
| phospholipase C, gamma 2 | ||
| polymerase (RNA) III (DNA directed) polypeptide A, 155kDa | ||
| polymerase (RNA) III (DNA directed) polypeptide B | ||
| polymerase (RNA) III (DNA directed) polypeptide C (62kD) | ||
| polymerase (RNA) III (DNA directed) polypeptide D | ||
| polymerase (RNA) III (DNA directed) polypeptide E | ||
| polymerase (RNA) III (DNA directed) polypeptide G (32kD) | ||
| polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) isoform a | ||
| protein kinase C, alpha | ||
| protein kinase C, beta isoform 2 | ||
| protein kinase C, delta | ||
| protein kinase C, epsilon | ||
| protein kinase C, eta | ||
| protein kinase C, gamma | ||
| protein kinase C, iota | ||
| protein kinase C, theta | ||
| protein kinase C, zeta isoform 1 | ||
| protein kinase D1 | ||
| protein kinase D3 | ||
| protein kinase, cAMP-dependent, catalytic, gamma | ||
| protein kinase, cAMP-dependent, regulatory, type I, beta | ||
| protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform (calcineurin A alpha) | ||
| protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta) | ||
| protein phosphatase 3 (formerly 2B), catalytic subunit, gamma isoform (calcineurin A gamma) | ||
| protein phosphatase 3 regulatory subunit B, beta isoform | ||
| protein phosphatase 3, regulatory subunit B, alpha isoform 1 | ||
| proto-oncogene tyrosine-protein kinase SRC | ||
| PTK2 protein tyrosine kinase 2 isoform a | ||
| ras homolog gene family, member A | ||
| ras-related C3 botulinum toxin substrate 1 isoform Rac1 | ||
| ras-related C3 botulinum toxin substrate 2 | ||
| reticuloendotheliosis viral oncogene homolog B | ||
| RNA polymerase II, polypeptide H | ||
| signal transducer and activator of transcription 3 isoform 2 | ||
| small GTPase protein E-Ras | ||
| small inducible cytokine A2 precursor | ||
| Sp1 transcription factor | ||
| v-akt murine thymoma viral oncogene homolog 1 | ||
| v-akt murine thymoma viral oncogene homolog 2 | ||
| v-akt murine thymoma viral oncogene homolog 3 isoform 1 | ||
| v-fos FBJ murine osteosarcoma viral oncogene homolog | ||
| v-Ha-ras Harvey rat sarcoma viral oncogene homolog isofrom 1 | ||
| v-rel reticuloendotheliosis viral oncogene homolog A, nuclear factor of kappa light polypeptide gene enhancer in B-cells 3, p65 | ||
| associates with | cofactor of BRCA1 | |
| nasal embryonic LHRH factor | ||
| RD RNA-binding protein | ||
| SKI-interacting protein | ||
| TH1-like protein | ||
| transcription elongation regulator 1 isoform 1 | ||
| Wolf-Hirschhorn syndrome candidate 2 protein | ||
| binds | activated RNA polymerase II transcription cofactor 4 | |
| B-cell CLL/lymphoma 11B isoform 1 | ||
| beta tubulin 1, class VI | ||
| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa | ||
| CC chemokine receptor 3 | ||
| CCAAT/enhancer binding protein beta | ||
| chemokine (C-C motif) receptor 2 isoform B | ||
| chemokine (C-X-C motif) receptor 4 isoform b | ||
| complement component 1, q subcomponent binding protein precursor | ||
| core histone macroH2A2.2 | ||
| CREB binding protein isoform a | ||
| CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 isoform FCP1a | ||
| cyclin E1 isoform 1 | ||
| cyclin H | ||
| cyclin T1 | ||
| cyclin T2 isoform a | ||
| cyclin-dependent kinase 2 isoform 1 | ||
| cyclin-dependent kinase 7 | ||
| cyclin-dependent kinase 9 | ||
| dipeptidylpeptidase IV | ||
| E1A binding protein p300 | ||
| early growth response 1 | ||
| eukaryotic translation initiation factor 2-alpha kinase 2 | ||
| excision repair cross-complementing rodent repair deficiency, complementation group 2 protein | ||
| excision repair cross-complementing rodent repair deficiency, complementation group 3 | ||
| fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) | ||
| GCN5 general control of amino-acid synthesis 5-like 2 | ||
| general transcription factor IIB | ||
| general transcription factor IIH, polypeptide 1 (62kD subunit) | ||
| general transcription factor IIH, polypeptide 2, 44kD subunit | ||
| general transcription factor IIH, polypeptide 3, 34kDa | ||
| general transcription factor IIH, polypeptide 4, 52kDa | ||
| granulin precursor | ||
| H2A histone family member | ||
| H2A histone family, member A | ||
| H2A histone family, member B3 | ||
| H2A histone family, member C | ||
| H2A histone family, member D | ||
| H2A histone family, member E | ||
| H2A histone family, member I | ||
| H2A histone family, member J isoform 1 | ||
| H2A histone family, member L | ||
| H2A histone family, member M | ||
| H2A histone family, member N | ||