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GeneRIF Statistics

As of July 14, 2008

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Totals

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333254 GeneRIFs  
210750 Distinct publications  
42502 Genes carrying GeneRIFs  
671 Taxa with GeneRIFs  

(What's being counted?)

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History

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Graph of number of GeneRIFs over time Graph of number of Publications over time Graph of number of Genes over time Graph of number of Taxa over time
GeneRIFs Publications Genes Taxa
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Counts by Source

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Source GeneRIFs Distinct
Publications
Genes Taxa
NLM Index Section 271427 186485 40984 661
NIAID HIV project 35 65 21 2
EcoGene 874 778 874 1
HuGENet 57156 34819 3695 1
General public 3762 2780 2794 87
Totals 333254 210750 42502 671
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Counts by Organism

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Organism GeneRIFs Distinct
Publications
Genes
Abelson murine leukemia virus 2 2 1
Acidithiobacillus ferrooxidans 1 1 1
Acinetobacter sp. ADP1 1 1 1
Adeno-associated virus - 1 1 1 1
Adeno-associated virus - 2 14 7 9
Aedes aegypti (yellow fever mosquito) 1 1 1
Aeromonas phage Aeh1 2 1 2
Aeromonas salmonicida subsp. salmonicida 1 1 1
Aeropyrum pernix K1 13 12 12
African horsesickness virus 1 1 1
African swine fever virus 8 8 6
Agrobacterium rhizogenes 1 1 1
Agrobacterium tumefaciens 16 13 11
Agrobacterium tumefaciens str. C58 43 33 39
Alcelaphine herpesvirus 1 (wildebeest herpesvirus) 1 1 1
Alfalfa mosaic virus 1 1 1
Anabaena variabilis ATCC 29413 1 1 1
Anopheles gambiae str. PEST 27 21 23
Apis mellifera (honey bee) 38 34 29
Apple latent spherical virus 1 1 1
Aquifex aeolicus VF5 14 14 11
Arabidopsis thaliana (thale cress) 3115 2316 1955
Archaeoglobus fulgidus DSM 4304 19 18 18
Ashbya gossypii ATCC 10895 3 3 3
Aspergillus clavatus NRRL 1 1 1 1
Aspergillus fumigatus Af293 25 23 23
Aspergillus nidulans FGSC A4 16 14 15
Aspergillus oryzae RIB40 1 1 1
Autographa californica nucleopolyhedrovirus 10 10 7
Avian metapneumovirus 1 1 1
Azoarcus sp. BH72 1 1 1
BK polyomavirus 1 1 1
Bacillus amyloliquefaciens FZB42 1 1 1
Bacillus anthracis str. 'Ames Ancestor' 22 20 11
Bacillus anthracis str. A2012 2 2 2
Bacillus anthracis str. Ames 9 5 8
Bacillus anthracis str. Sterne 3 2 3
Bacillus cereus ATCC 10987 3 3 2
Bacillus cereus ATCC 14579 13 13 11
Bacillus cereus E33L 7 7 7
Bacillus cereus subsp. cytotoxis NVH 391-98 1 1 1
Bacillus halodurans C-125 6 6 6
Bacillus licheniformis ATCC 14580 5 5 4
Bacillus phage GA-1 1 1 1
Bacillus phage SPP1 1 1 1
Bacillus phage phi29 7 6 6
Bacillus subtilis subsp. subtilis str. 168 414 304 300
Bacillus thuringiensis 1 1 1
Bacillus thuringiensis serovar israelensis 4 3 3
Bacillus thuringiensis serovar konkukian str. 97-27 3 2 3
Bacteroides fragilis NCTC 9343 3 3 3
Bacteroides thetaiotaomicron VPI-5482 2 2 2
Bamboo mosaic virus 1 1 1
Banna virus 1 1 1
Barley stripe mosaic virus 1 1 1
Bartonella quintana str. Toulouse 3 1 3
Beet curly top virus 1 1 1
Beet necrotic yellow vein virus 1 1 1
Beet yellows virus 2 2 1
Bhendi yellow vein mosaic virus 1 1 1
Bhendi yellow vein mosaic virus satellite DNA beta 1 1 1
Bifidobacterium longum NCC2705 2 2 2
Bluetongue virus 5 5 5
Bombyx mori (domestic silkworm) 48 37 41
Bombyx mori NPV 6 6 5
Bordetella bronchiseptica RB50 10 7 9
Bordetella parapertussis 12822 2 1 2
Bordetella pertussis Tohama I 15 13 7
Borna disease virus 6 6 4
Borrelia afzelii PKo 2 2 2
Borrelia burgdorferi B31 51 36 29
Borrelia garinii PBi 1 1 1
Bos indicus (zebu) 2 2 2
Bos taurus (cattle) 1945 1540 893
Bovine coronavirus 3 1 3
Bovine herpesvirus 1 13 11 7
Bovine herpesvirus 5 1 1 1
Bovine immunodeficiency virus 3 3 2
Bovine papillomavirus - 1 15 13 5
Bovine papular stomatitis virus 1 1 1
Bovine respiratory syncytial virus 1 1 1
Bovine viral diarrhea virus 1 3 3 1
Bradyrhizobium japonicum USDA 110 30 23 25
Brome mosaic virus 3 2 2
Brucella abortus bv. 1 str. 9-941 4 3 4
Brucella melitensis 16M 2 2 2
Brucella melitensis biovar Abortus 2308 4 2 4
Brucella suis 1330 8 6 7
Bunyamwera virus 1 1 1
Burkholderia cenocepacia AU 1054 2 2 2
Burkholderia mallei ATCC 23344 1 1 1
Burkholderia pseudomallei K96243 8 7 5
Burkholderia xenovorans LB400 3 3 2
Caenorhabditis elegans (nematode) 1579 1111 948
Campylobacter coli 1 1 1
Campylobacter jejuni RM1221 1 1 1
Campylobacter jejuni subsp. jejuni 81-176 2 2 2
Campylobacter jejuni subsp. jejuni 81116 1 1 1
Campylobacter jejuni subsp. jejuni NCTC 11168 30 23 29
Candida albicans SC5314 55 47 47
Candida glabrata CBS 138 7 4 7
Candidatus Pelagibacter ubique HTCC1062 1 1 1
Canine distemper virus 3 3 2
Canine parvovirus 1 1 1
Canis lupus familiaris (dog) 623 475 429
Carboxydothermus hydrogenoformans Z-2901 1 1 1
Caulobacter crescentus CB15 39 24 32
Cercopithecine herpesvirus 15 (Rhesus lymphocryptovirus) 1 1 1
Cercopithecine herpesvirus 8 (Rhesus cytomegalovirus) 1 1 1
Cercopithecine herpesvirus 9 (Simian varicella virus) 1 1 1
Cereal yellow dwarf virus - RPS 1 1 1
Chicken anemia virus 8 8 1
Chlamydia muridarum Nigg 2 2 2
Chlamydia trachomatis A/HAR-13 2 2 2
Chlamydia trachomatis D/UW-3/CX 9 8 7
Chlamydia trachomatis L2b/UCH-1/proctitis 1 1 1
Chlamydomonas reinhardtii 18 17 16
Chlamydophila abortus S26/3 1 1 1
Chlamydophila pneumoniae AR39 5 5 5
Chlamydophila pneumoniae CWL029 2 2 2
Chlamydophila pneumoniae TW-183 2 2 2
Chlorobium tepidum TLS 18 11 16
Chromobacterium violaceum ATCC 12472 3 1 3
Ciona intestinalis 31 22 27
Citrus tristeza virus 1 1 1
Classical swine fever virus 8 8 1
Clostridium acetobutylicum ATCC 824 8 6 8
Clostridium botulinum A str. ATCC 3502 2 2 2
Clostridium botulinum F str. Langeland 1 1 1
Clostridium difficile 630 2 2 2
Clostridium kluyveri DSM 555 1 1 1
Clostridium perfringens 1 1 1
Clostridium perfringens ATCC 13124 1 1 1
Clostridium perfringens SM101 2 2 2
Clostridium perfringens str. 13 12 11 7
Clostridium tetani E88 2 2 2
Clostridium thermocellum ATCC 27405 2 1 2
Colwellia psychrerythraea 34H 1 1 1
Corynebacterium diphtheriae NCTC 13129 10 8 7
Corynebacterium glutamicum ATCC 13032 45 35 43
Corynebacterium glutamicum R 1 1 1
Corynebacterium jeikeium 1 1 1
Cottontail rabbit papillomavirus 1 1 1
Cowpea chlorotic mottle virus 1 1 1
Cowpox virus 1 1 1
Cryptococcus neoformans var. neoformans JEC21 13 11 9
Cryptosporidium hominis TU502 1 1 1
Cryptosporidium parvum Iowa II 2 2 2
Cucumber mosaic virus (cucumber mosaic cucumovirus) 4 3 3
Cucumber necrosis virus 1 1 1
Cymbidium mosaic virus 1 1 1
Cypovirus 1 1 1 1
Danio rerio (zebrafish) 1846 1333 1165
Debaryomyces hansenii CBS767 1 1 1
Deinococcus geothermalis DSM 11300 1 1 1
Deinococcus radiodurans R1 29 27 25
Dengue virus 1 1 1 1
Dengue virus 2 12 12 1
Desulfovibrio desulfuricans subsp. desulfuricans str. G20 1 1 1
Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough 12 9 12
Dichelobacter nodosus VCS1703A 2 1 2
Dictyostelium discoideum AX4 59 48 50
Drosophila melanogaster (fruit fly) 5856 4083 2081
Ectocarpus siliculosus virus 1 1 1 1
Ectromelia virus 3 2 3
Ehrlichia ruminantium str. Welgevonden 1 1 1
Emiliania huxleyi virus 86 1 1 1
Encephalitozoon cuniculi GB-M1 4 4 3
Encephalomyocarditis virus 1 1 1
Entamoeba histolytica HM-1:IMSS 6 6 5
Enterobacteria phage 933W 2 2 2
Enterobacteria phage M13 2 2 2
Enterobacteria phage Mu 1 1 1
Enterobacteria phage N15 4 4 4
Enterobacteria phage N4 1 1 1
Enterobacteria phage P1 3 3 3
Enterobacteria phage P2 1 1 1
Enterobacteria phage P22 6 6 4
Enterobacteria phage P4 2 1 2
Enterobacteria phage RB69 4 4 1
Enterobacteria phage T3 1 1 1
Enterobacteria phage T4 53 43 37
Enterobacteria phage T5 1 1 1
Enterobacteria phage T7 15 14 5
Enterobacteria phage lambda 11 9 7
Enterobacterio phage MS2 1 1 1
Enterococcus faecalis 5 5 3
Enterococcus faecalis V583 12 8 12
Epiphyas postvittana NPV 1 1 1
Equid herpesvirus 1 (Equine herpesvirus 1) 2 2 2
Equine arteritis virus 3 3 1
Equine infectious anemia virus 2 2 1
Equus caballus (horse) 42 29 36
Erythrobacter litoralis HTCC2594 1 1 1
Escherichia coli 48 43 40
Escherichia coli 536 1 1 1
Escherichia coli APEC O1 10 9 10
Escherichia coli CFT073 73 68 66
Escherichia coli E24377A 5 5 5
Escherichia coli HS 8 7 8
Escherichia coli O157:H7 EDL933 40 36 36
Escherichia coli O157:H7 str. Sakai 34 29 27
Escherichia coli SMS-3-5 1 1 1
Escherichia coli UTI89 15 15 14
Escherichia coli str. K12 substr. DH10B 18 15 18
Escherichia coli str. K12 substr. MG1655 3367 2650 1454
Feline foamy virus 1 1 1
Feline immunodeficiency virus 5 5 2
Feline leukemia virus 1 1 1
Felis catus (domestic cat) 63 52 46
Foot-and-mouth disease virus - type O 1 1 1
Fowlpox virus 1 1 1
Francisella tularensis subsp. holarctica 2 1 2
Francisella tularensis subsp. novicida U112 4 3 4
Francisella tularensis subsp. tularensis SCHU S4 2 2 2
Gallid herpesvirus 1 5 3 5
Gallid herpesvirus 2 (Marek's disease virus type 1) 6 6 5
Gallid herpesvirus 3 (Marek's disease virus type 2) 2 1 2