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Report for CCDS31028.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31028.1 Public Homo sapiens 1 RAB3GAP2 24 110 108 CCDS HistoryNCBI Gene:25782Re-query CCDS DB by CCDS ID:31028.1Re-query CCDS DB by GeneID:25782See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31028.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358951.7 ENSP00000351832.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358951.7Link to Ensembl Protein Viewer:ENSP00000351832.2Re-query CCDS DB by Nucleotide ID:ENST00000358951Re-query CCDS DB by Protein ID:ENSP00000351832
Original member Current member NCBI NM_012414.4 NP_036546.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012414.4Link to Protein Sequence:NP_036546.2Re-query CCDS DB by Nucleotide ID:NM_012414Re-query CCDS DB by Protein ID:NP_036546Link to BLAST:NP_036546.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036546.2 1393 Q9H2M9-1 1393 100% 0 0

Chromosomal Locations for CCDS 31028.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 220151251 220151406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220151606 220151764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220153185 220153406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220153968 220154057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220157270 220157488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220157802 220157876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220159386 220159421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220162198 220162268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220164733 220164799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220167293 220167399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220167502 220167675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220170892 220171120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220171889 220172049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220172637 220172742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220182257 220182354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220182718 220182931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220184036 220184163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220185651 220185741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220189703 220189767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220190064 220190146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220190377 220190520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220191068 220191284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220193240 220193379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220195078 220195167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220195298 220195377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220196250 220196398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220202276 220202374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220205907 220206006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220210388 220210489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220210801 220210876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220210955 220211002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220212887 220212968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220213856 220213979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220232799 220232863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220272223 220272337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4182 nt):
ATGGCCTGCTCCATTGTCCAGTTCTGCTACTTCCAGGACCTCCAGGCCGCCCGGGACTTCCTCTTTCCTC
ACCTGCGGGAGGAGATCCTCAGCGGCGCCTTGCGGAGGGACCCCAGTAAATCAACAGACTGGGAAGATGA
TGGTTGGGGAGCATGGGAAGAAAATGAACCACAAGAACCTGAAGAAGAAGGAAATACTTGCAAAACACAA
AAAACTTCCTGGCTCCAAGATTGTGTTTTATCCTTATCTCCAACCAATGATCTTATGGTGATAGCTCGAG
AGCAAAAAGCTGTATTTCTAGTGCCAAAATGGAAATATAGTGATAAAGGAAAGGAAGAAATGCAATTTGC
TGTTGGCTGGAGTGGTTCCTTAAATGTCGAAGAAGGGGAATGTGTAACCAGTGCTCTATGTATCCCACTA
GCAAGCCAAAAGAGGAGTTCCACTGGGCGTCCTGACTGGACCTGCATTGTGGTGGGTTTTACTTCAGGTT
ATGTACGCTTCTACACTGAGAATGGTGTGCTCTTGCTTGCACAGCTTTTGAATGAGGACCCAGTACTTCA
ACTTAAATGCAGAACCTATGAAATACCACGACATCCCGGCGTGACTGAGCAGAATGAAGAGTTGAGTATC
TTATATCCAGCTGCCATTGTGACTATTGATGGATTTAGCCTTTTTCAATCTCTTCGTGCTTGTCGAAATC
AGGTAGCAAAAGCTGCAGCATCAGGCAATGAGAACATACAACCACCACCATTAGCTTATAAGAAATGGGG
TCTACAAGATATTGACACTATTATTGATCATGCTAGTGTTGGTATTATGACTCTGTCCCCCTTTGATCAA
ATGAAGACTGCCTCCAATATAGGTGGATTTAATGCAGCAATTAAAAATAGTCCACCTGCCATGTCTCAGT
ATATCACTGTAGGGTCCAATCCATTTACTGGCTTCTTCTATGCTTTAGAGGGAAGCACACAACCATTATT
ATCCCATGTTGCACTAGCAGTTGCAAGTAAACTCACTTCTGCTTTATTTAATGCTGCCAGTGGTTGGCTT
GGTTGGAAAAGTAAGCACGAAGAAGAAGCTGTCCAAAAGCAAAAGCCGAAGGTTGAGCCAGCTACCCCAT
TAGCTGTAAGATTTGGACTTCCAGATTCTAGACGCCATGGTGAAAGCATATGTCTGTCTCCATGTAACAC
ACTGGCAGCAGTAACAGATGATTTCGGCAGAGTTATTTTATTGGATGTAGCTAGAGGAATTGCAATACGC
ATGTGGAAAGGGTACCGCGACGCACAAATTGGATGGATTCAAACTGTAGAGGACCTCCATGAAAGAGTGC
CAGAAAAGGCAGATTTTTCCCCCTTTGGAAATTCTCAGGGTCCAAGTCGAGTAGCTCAATTCCTTGTGAT
CTATGCGCCAAGAAGGGGAATTTTAGAAGTGTGGAGCACACAGCAGGGACCTAGAGTAGGAGCTTTCAAT
GTGGGGAAGCACTGCAGGCTGCTGTATCCTGGCTATAAAATAATGGGTTTAAATAATGTTACCAGTCAGA
GTTGGCAGCCACAGACTTATCAGATCTGTCTGGTTGATCCAGTGTCTGGAAGTGTGAAAACAGTGAACGT
TCCCTTCCATTTAGCACTGAGTGATAAGAAGAGTGAACGAGCCAAGGATATGCACCTAGTGAAGAAACTA
GCAGCCTTACTGAAAACAAAATCTCCCAATCTTGATTTGGTTGAAACAGAAATAAAGGAATTAATTCTTG
ATATTAAATACCCTGCAACCAAAAAACAAGCTTTGGAAAGCATTTTGGCAAGTGAACGTTTACCATTTTC
TTGCCTTAGAAACATCACTCAGACTTTAATGGACACTTTAAAAAGTCAAGAACTTGAGTCTGTTGATGAA
GGATTGCTACAGTTTTGTGCCAATAAACTAAAACTGCTGCAACTCTATGAGTCTGTCAGTCAATTAAATT
CCCTTGATTTTCATTTAGACACACCATTCTCTGATAATGACTTGGCTCTGTTACTAAGGCTTGATGAAAA
AGAACTGCTTAAGCTCCAGGCATTACTAGAGAAATATAAGCAAGAGAACACCAGGACAAATGTTCGATTT
TCTGATGATAAAGATGGTGTGTTGCCTGTAAAAACATTCTTGGAATATTTAGAATATGAAAAGGATGTGC
TCAACATAAAGAAAATAAGTGAAGAGGAATATGTGGCTTTAGGTAGTTTCTTTTTTTGGAAGTGTTTGCA
TGGAGAAAGCTCCACTGAGGATATGTGTCACACTTTGGAGTCGGCTGGTCTTAGCCCTCAGCTGTTGTTG
TCTCTGCTCCTGAGTGTTTGGCTTTCAAAGGAAAAGGATATTTTGGATAAACCACAGTCAATCTGCTGTC
TTCATACCATGCTGTCCCTCCTGAGCAAGATGAAAGTGGCCATCGATGAGACCTGGGATTCTCAGTCTGT
GTCCCCATGGTGGCAGCAGATGCGCACAGCCTGTATTCAGTCTGAGAACAATGGAGCCGCTCTGTTGTCT
GCGCATGTTGGGCATTCTGTTGCTGCACAGATATCAAACAACATGACAGAGAAAAAATTTTCCCAAACAG
TTTTGGGTGCTGATTCAGAGGCCCTCACTGATTCCTGGGAGGCACTTTCTCTTGACACTGAGTACTGGAA
ACTCCTTCTGAAACAGCTGGAGGATTGTCTCATACTTCAGACTCTGCTTCACAGCAAAGGGAACACTCAG
ACCTCCAAAGTGTCATCACTGCAGGCTGAGCCACTTCCAAGGCTTTCTGTTAAAAAGTTATTAGAAGGAG
GAAAAGGTGGCATTGCAGACAGTGTAGCCAAGTGGATATTTAAACAGGACTTCAGCCCTGAAGTATTAAA
ACTGGCTAATGAAGAAAGAGATGCAGAAAACCCAGATGAACCCAAAGAAGGTGTTAACAGAAGTTTCCTT
GAGGTATCAGAGATGGAGATGGACTTAGGAGCCATACCAGACTTACTGCATTTAGCCTATGAGCAGTTTC
CTTGTAGCCTTGAGCTCGATGTCTTGCATGCACATTGCTGCTGGGAGTACGTTGTTCAGTGGAATAAAGA
TCCAGAGGAAGCACGTTTTTTTGTTAGGTCAATAGAACACTTGAAGCAAATATTTAATGCACATGTTCAA
AATGGCATTGCACTGATGATGTGGAATACGTTCTTAGTTAAAAGATTTTCTGCTGCTACATACTTAATGG
ATAAGGTTGGAAAATCACCAAAAGATAGGTTATGCCGAAGGGATGTGGGAATGAGTGACACAGCAATGAC
ATCTTTCCTCGGCTCCTGTTTGGATCTTCTTCAGATCTTAATGGAGGCAGATGTTAGCAGGGATGAAATA
CAGGTGCCTGTGCTGGATACTGAGGATGCGTGGCTCTCCGTGGAAGGACCAATCTCCATAGTGGAACTGG
CCCTTGAACAGAAGCACATCCACTACCCACTGGTGGAGCACCACTCCATCCTGTGCTCCATCTTGTATGC
AGTCATGAGGTTTTCTCTGAAGACCGTGAAGCCACTTTCACTTTTTGACAGTAAGGGAAAAAATGCATTT
TTCAAAGACCTAACTTCAATTCAGTTATTACCTAGTGGGGAAATGGATCCAAATTTTATTTCTGTACGAC
AACAGTTCTTATTGAAAGTTGTCAGTGCAGCTGTCCAGGCCCAACATTCAGCCACAAAGGTCAAAGATCC
CACAGAAGAGGCCACACCCACTCCTTTTGGGAAAGACCAAGATTGGCCAGCTCTAGCTGTGGATTTAGCC
CATCACCTTCAAGTTAGTGAAGATGTTGTTAGAAGGCATTATGTGGGGGAACTATACAACTATGGAGTTG
ACCACTTAGGAGAAGAGGCCATTCTACAGGTTCATGACAAAGAGGTCCTTGCCTCTCAGCTGCTGGTGCT
CACGGGGCAAAGGCTGGCTCATGCGCTTCTCCACACCCAGACAAAAGAAGGAATGGAGCTGCTTGCCAGA
CTTCCACCCACACTGTGTACTTGGCTGAAAGCAATGGACCCCCAGGACCTTCAAAACACTGAAGTGCCAA
TTGCAACAACAGCTAAACTAGTAAATAAAGTAATTGAGCTTTTACCAGAAAAACATGGGCAATATGGTCT
AGCCTTACACCTCATTGAAGCTGTGGAAGCCATATCTCTTCCTTCTTTATGA

Translation (1393 aa):
MACSIVQFCYFQDLQAARDFLFPHLREEILSGALRRDPSKSTDWEDDGWGAWEENEPQEPEEEGNTCKTQ
KTSWLQDCVLSLSPTNDLMVIAREQKAVFLVPKWKYSDKGKEEMQFAVGWSGSLNVEEGECVTSALCIPL
ASQKRSSTGRPDWTCIVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSI
LYPAAIVTIDGFSLFQSLRACRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDHASVGIMTLSPFDQ
MKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLLSHVALAVASKLTSALFNAASGWL
GWKSKHEEEAVQKQKPKVEPATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIR
MWKGYRDAQIGWIQTVEDLHERVPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILEVWSTQQGPRVGAFN
VGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVNVPFHLALSDKKSERAKDMHLVKKL
AALLKTKSPNLDLVETEIKELILDIKYPATKKQALESILASERLPFSCLRNITQTLMDTLKSQELESVDE
GLLQFCANKLKLLQLYESVSQLNSLDFHLDTPFSDNDLALLLRLDEKELLKLQALLEKYKQENTRTNVRF
SDDKDGVLPVKTFLEYLEYEKDVLNIKKISEEEYVALGSFFFWKCLHGESSTEDMCHTLESAGLSPQLLL
SLLLSVWLSKEKDILDKPQSICCLHTMLSLLSKMKVAIDETWDSQSVSPWWQQMRTACIQSENNGAALLS
AHVGHSVAAQISNNMTEKKFSQTVLGADSEALTDSWEALSLDTEYWKLLLKQLEDCLILQTLLHSKGNTQ
TSKVSSLQAEPLPRLSVKKLLEGGKGGIADSVAKWIFKQDFSPEVLKLANEERDAENPDEPKEGVNRSFL
EVSEMEMDLGAIPDLLHLAYEQFPCSLELDVLHAHCCWEYVVQWNKDPEEARFFVRSIEHLKQIFNAHVQ
NGIALMMWNTFLVKRFSAATYLMDKVGKSPKDRLCRRDVGMSDTAMTSFLGSCLDLLQILMEADVSRDEI
QVPVLDTEDAWLSVEGPISIVELALEQKHIHYPLVEHHSILCSILYAVMRFSLKTVKPLSLFDSKGKNAF
FKDLTSIQLLPSGEMDPNFISVRQQFLLKVVSAAVQAQHSATKVKDPTEEATPTPFGKDQDWPALAVDLA
HHLQVSEDVVRRHYVGELYNYGVDHLGEEAILQVHDKEVLASQLLVLTGQRLAHALLHTQTKEGMELLAR
LPPTLCTWLKAMDPQDLQNTEVPIATTAKLVNKVIELLPEKHGQYGLALHLIEAVEAISLPSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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