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Report for CCDS8212.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8212.1 Public Homo sapiens 11 FOLR2 24 110 108 CCDS HistoryNCBI Gene:2350Re-query CCDS DB by CCDS ID:8212.1Re-query CCDS DB by GeneID:2350See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 8212.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000298223.11 ENSP00000298223.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000298223.11Link to Ensembl Protein Viewer:ENSP00000298223.6Re-query CCDS DB by Nucleotide ID:ENST00000298223Re-query CCDS DB by Protein ID:ENSP00000298223
Original member Current member NCBI NM_000803.5 NP_000794.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000803.5Link to Protein Sequence:NP_000794.3Re-query CCDS DB by Nucleotide ID:NM_000803Re-query CCDS DB by Protein ID:NP_000794Link to BLAST:NP_000794.3
Original member Current member NCBI NM_001113534.2 NP_001107006.1 Accepted alive Link to Nucleotide Sequence:NM_001113534.2Link to Protein Sequence:NP_001107006.1Re-query CCDS DB by Nucleotide ID:NM_001113534Re-query CCDS DB by Protein ID:NP_001107006Link to BLAST:NP_001107006.1
Original member Current member NCBI NM_001113535.2 NP_001107007.1 Accepted alive Link to Nucleotide Sequence:NM_001113535.2Link to Protein Sequence:NP_001107007.1Re-query CCDS DB by Nucleotide ID:NM_001113535Re-query CCDS DB by Protein ID:NP_001107007Link to BLAST:NP_001107007.1
Original member Current member NCBI NM_001113536.2 NP_001107008.1 Accepted alive Link to Nucleotide Sequence:NM_001113536.2Link to Protein Sequence:NP_001107008.1Re-query CCDS DB by Nucleotide ID:NM_001113536Re-query CCDS DB by Protein ID:NP_001107008Link to BLAST:NP_001107008.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000794.3 255 P14207 255 100% 0 0
NP_001107006.1 255 P14207 255 100% 0 0
NP_001107007.1 255 P14207 255 100% 0 0
NP_001107008.1 255 P14207 255 100% 0 0

Chromosomal Locations for CCDS 8212.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 72218585 72218734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72220870 72221058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72221176 72221311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72221470 72221762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (768 nt):
ATGGTCTGGAAATGGATGCCACTTCTGCTGCTTCTGGTCTGTGTAGCCACCATGTGCAGTGCCCAGGACA
GGACTGATCTCCTCAATGTCTGTATGGATGCCAAGCACCACAAGACAAAGCCAGGTCCTGAGGACAAGCT
GCATGACCAATGCAGTCCCTGGAAGAAGAATGCCTGCTGCACAGCCAGCACCAGCCAGGAGCTGCACAAG
GACACCTCCCGCCTGTACAACTTTAACTGGGACCACTGCGGCAAGATGGAGCCCGCCTGCAAGCGCCACT
TCATCCAGGACACCTGTCTCTATGAGTGCTCACCCAACCTGGGGCCCTGGATCCAGCAGGTGAATCAGAG
CTGGCGCAAAGAACGCTTCCTGGATGTGCCCTTATGCAAAGAGGACTGTCAGCGCTGGTGGGAGGATTGT
CACACCTCCCACACGTGCAAGAGCAACTGGCACAGAGGATGGGACTGGACCTCAGGAGTTAACAAGTGCC
CAGCTGGGGCTCTCTGCCGCACCTTTGAGTCCTACTTCCCCACTCCAGCTGCCCTTTGTGAAGGCCTCTG
GAGTCACTCATACAAGGTCAGCAACTACAGCCGAGGGAGCGGCCGCTGCATCCAGATGTGGTTTGATTCA
GCCCAGGGCAACCCCAACGAGGAAGTGGCGAGGTTCTATGCTGCAGCCATGCATGTGAATGCTGGTGAGA
TGCTTCATGGGACTGGGGGTCTCCTGCTCAGTCTGGCCCTGATGCTGCAACTCTGGCTCCTTGGCTGA

Translation (255 aa):
MVWKWMPLLLLLVCVATMCSAQDRTDLLNVCMDAKHHKTKPGPEDKLHDQCSPWKKNACCTASTSQELHK
DTSRLYNFNWDHCGKMEPACKRHFIQDTCLYECSPNLGPWIQQVNQSWRKERFLDVPLCKEDCQRWWEDC
HTSHTCKSNWHRGWDWTSGVNKCPAGALCRTFESYFPTPAALCEGLWSHSYKVSNYSRGSGRCIQMWFDS
AQGNPNEEVARFYAAAMHVNAGEMLHGTGGLLLSLALMLQLWLLG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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