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Report for CCDS13998.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13998.1 Public Homo sapiens 22 ENTHD1 24 110 108 CCDS HistoryNCBI Gene:150350Re-query CCDS DB by CCDS ID:13998.1Re-query CCDS DB by GeneID:150350See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13998.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325157.7 ENSP00000317431.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000325157.7Link to Ensembl Protein Viewer:ENSP00000317431.6Re-query CCDS DB by Nucleotide ID:ENST00000325157Re-query CCDS DB by Protein ID:ENSP00000317431
Original member Current member NCBI NM_152512.4 NP_689725.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152512.4Link to Protein Sequence:NP_689725.2Re-query CCDS DB by Nucleotide ID:NM_152512Re-query CCDS DB by Protein ID:NP_689725Link to BLAST:NP_689725.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689725.2 607 Q8IYW4 607 100% 0 0

Chromosomal Locations for CCDS 13998.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 39743679 39744283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39765223 39765609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39820993 39821113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39835840 39835958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39861765 39862007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 39887400 39887748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1824 nt):
ATGGCGTTCAGGAGACAAGTGAAAAACTTTGTGAAAAATTACTCAGATGCTGAAATAAAAGTCAGGGAAG
CAACTTCTAACGACCCTTGGGGTCCCTCTAGTTCTCTGATGTTAGATATCAGTGACTTGACTTTCAACAC
AATTTCTCTCTCAGAGATTATGAATATGCTGTGGCACAGACTCAATGACCATGGGAAGAACTGGCGCCAC
GTGTATAAATCCCTTACCCTAATGGATTATCTCATCAAGAATGGATCAAAGAAAGTTATTCAGCATTGCA
GAGAGGGGTTCTGTAACCTTCAAACACTAAAAGATTTTCAGCACATAGATGAAGCTGGAAAAGACCAAGG
TTATTATATCCGGGAAAAATCTAAGCAAGTCATCACATTGCTGATGGATGAACCATTGCTGTGTAAAGAG
AGGGAAGTGGCATGTCGGACTAGACAGCGTACCTCCCACTCTATATTGTTTTCTAAAAGACAACTTGGTT
CAAGTAACTCACTGACAGCGTGCACTTCTGCCCCCACACCGGATATTTCTGCTTCAGAGAAGAAGTATAA
GCTTCCTAAGTTTGGAAGGTTACATAATAAAAGAAATGTGTGCAAGGCAGGATTGAAACAAGAGCATTGC
CAAGATGTTCATTTGCCTACAGAAACTATGTTGTCCCAGGAAACACTTCCACTCAAGATTCATGGTTGGA
AATCAACAGAGGACCTGATGACATTTTTGGATGATGATCCAGAGCTGCCTTTACTAGCAACACCTCCTTC
CATTGTCTCTCCAATCACTTGCTTGTCAGAAGCAGAAGAAGTTTGTAATCTTTCGGGTGCAGATGCTGTG
CCTACTCTCTCAGAAAATAGTCCTTCTGGGCAGAGAGATGTGAGTTTGGACAAGAGATCAGATGGTATCT
TTACAAATACTGTCACAGAAAACCTCTTGGAAACACCTTTAGAAAAGCAATCAGCTGCAGAAGGTCTTAA
AACATTGACAATTTTACCAGCATGTTGGTCAAGTAAAGAGGAGTTTATCAGCCCCGACTTAAGGGTATCA
AAGTCAGATTCTACTTTCCATAACCAGGCCTCTGTAGAAACACTCTGTCTCTCTCCCTCATTCAAAATAT
TTGACCGAGTGAAGGAGATTGTAATCAACAAGGCCTACCAGAAACCAGCACAATCCAGCATTCAGATGGA
TGATAAAATCCTCAAGACAACCACACGGGTTTCAACTGCTTCTGAGGGAGCATCTTCCTTTTCTCCTTTA
TCCATGTCATCTCCTGATTTAGCCTCTCCAGAGAAGTCAGCTCATCTCTTATCACCAATTCTGGCCGGAC
CTTCCTTCTGGACTCTGTCCCATCAACAGTTGTCTTCTACCTCCTTTAAAGATGAAGATAAGACAGCCAA
GCTGCATCACTCCTTTGCTTCTAGGGGCCCAGTGTCTTCTGATGTAGAGGAAAATGATAGCCTCAATCTA
CTGGGAATTCTTCCAAATAACTCTGATTCTGCTAAAAAGAATATAAGTCACATTTCTAGTAGTCACTGGG
GGGAGTTTTCCACCCAAAATGTAGACCAGTTCATCCCTCTGTCCTGTTCTGGTTTTCAGTCAACCAAAGA
CTTCCCCCAGGAACCTGAAGCAAAGAATTCCATTAGTGTTCTTTTAAGGGAGGTAAAACGTGCGATCGCT
AGATTACATGAAGATCTGAGCACAGTGATCCAAGAACTTAATGTCATCAATAACATCTTGATGAGCATGA
GTCTGAATAGTTCACAAATAAGCCAGTCTTCCCAGGTCCCCCAGTCTTCTGAGGGGAGCTCAGATCAGAT
CTAA

Translation (607 aa):
MAFRRQVKNFVKNYSDAEIKVREATSNDPWGPSSSLMLDISDLTFNTISLSEIMNMLWHRLNDHGKNWRH
VYKSLTLMDYLIKNGSKKVIQHCREGFCNLQTLKDFQHIDEAGKDQGYYIREKSKQVITLLMDEPLLCKE
REVACRTRQRTSHSILFSKRQLGSSNSLTACTSAPTPDISASEKKYKLPKFGRLHNKRNVCKAGLKQEHC
QDVHLPTETMLSQETLPLKIHGWKSTEDLMTFLDDDPELPLLATPPSIVSPITCLSEAEEVCNLSGADAV
PTLSENSPSGQRDVSLDKRSDGIFTNTVTENLLETPLEKQSAAEGLKTLTILPACWSSKEEFISPDLRVS
KSDSTFHNQASVETLCLSPSFKIFDRVKEIVINKAYQKPAQSSIQMDDKILKTTTRVSTASEGASSFSPL
SMSSPDLASPEKSAHLLSPILAGPSFWTLSHQQLSSTSFKDEDKTAKLHHSFASRGPVSSDVEENDSLNL
LGILPNNSDSAKKNISHISSSHWGEFSTQNVDQFIPLSCSGFQSTKDFPQEPEAKNSISVLLREVKRAIA
RLHEDLSTVIQELNVINNILMSMSLNSSQISQSSQVPQSSEGSSDQI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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