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Report for CCDS45695.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45695.1 Public Homo sapiens 17 CFAP97D1 24 110 108 CCDS HistoryNCBI Gene:284067Re-query CCDS DB by CCDS ID:45695.1Re-query CCDS DB by GeneID:284067See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45695.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000449302.8 ENSP00000415662.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000449302.8Link to Ensembl Protein Viewer:ENSP00000415662.2Re-query CCDS DB by Nucleotide ID:ENST00000449302Re-query CCDS DB by Protein ID:ENSP00000415662
Original member Current member NCBI NM_001136483.3 NP_001129955.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001136483.3Link to Protein Sequence:NP_001129955.1Re-query CCDS DB by Nucleotide ID:NM_001136483Re-query CCDS DB by Protein ID:NP_001129955Link to BLAST:NP_001129955.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129955.1 164 B2RV13 164 100% 0 0

Chromosomal Locations for CCDS 45695.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 43780463 43780586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43781119 43781189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43781774 43781892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43783180 43783303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 43783837 43783893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (495 nt):
ATGAACAATTCCCTGGATTATCTGGCCTACCCTGTTATCGTCTCTAATCACAGGCAAAGCACAACCTTCA
GA
AAGAAACTGGACTTTGGCCACTACGTATCTCACAAGAATAGAATACAAATAGCGAAGCCTACTGTTGA
T
ACCAAACCTCCAGTGGCGCACACAAATCACATTTTAAAATTGAGCAAACTACAGGGTGAACAAAAGAAA
ATC
AACAAAATCGAGTATGAAAACAAGCAACTGTGTCAGAAAATCGCAAATGCCCATCGCGGCCCTGCCA
AG
GTGGATTGCTGGAATGAATATTTTTCCAAGAGCTTAAACAGAGAAACAAGGAACCGCGAGCTAGTGAG
A
ATCACCATGGAAAACCAGGGCATTCTGAAGAGGCTTGTTGATCGCAAACCCCACTATGACCGCAGGGCA
TCT
GAGATAGACTGGCAGAATTCAAGGCGCTATATCAGAAATACCACGAGATATCTTCTCTCCCAAAATG
AA
TAG


Translation (164 aa):
MNNSLDYLAYPVIVSNHRQSTTFRKKLDFGHYVSHKNRIQIAKPTVDTKPPVAHTNHILKLSKLQGEQKK
I
NKIEYENKQLCQKIANAHRGPAKVDCWNEYFSK
SLNRETRNRELVRITMENQGILKRLVDRKPHYDRRA
S
EIDWQ
NSRRYIRNTTRYLLSQNE



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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