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Report for CCDS31678.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31678.1 Public Homo sapiens 11 SDHD 12 104 71 CCDS HistoryNCBI Gene:6392Re-query CCDS DB by CCDS ID:31678.1Re-query CCDS DB by GeneID:6392

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Sequence IDs included in CCDS 31678.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENST00000375549 ENSP00000364699 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375549Link to Ensembl Protein Viewer:ENSP00000364699Re-query CCDS DB by Nucleotide ID:ENST00000375549Re-query CCDS DB by Protein ID:ENSP00000364699
Original member Current member EBI,WTSI OTTHUMT00000392351 OTTHUMP00000234720 Accepted alive Link to Vega Transcript Viewer:OTTHUMT00000392351Link to Vega Protein Viewer:OTTHUMP00000234720Re-query CCDS DB by Nucleotide ID:OTTHUMT00000392351Re-query CCDS DB by Protein ID:OTTHUMP00000234720
Original member NCBI NM_003002.2 NP_002993.1 Updated not alive Link to Nucleotide Sequence:NM_003002.2Link to Protein Sequence:NP_002993.1Re-query CCDS DB by Nucleotide ID:NM_003002Re-query CCDS DB by Protein ID:NP_002993
Current member NCBI NM_003002.3 NP_002993.1 Accepted alive Link to Nucleotide Sequence:NM_003002.3Link to Protein Sequence:NP_002993.1Re-query CCDS DB by Nucleotide ID:NM_003002Re-query CCDS DB by Protein ID:NP_002993Link to BLink:NP_002993.1

Chromosomal Locations for CCDS 31678.1

Assembly GRCh37.p10 (GCF_000001405.22)

On '+' strand of Chromosome 11 (NC_000011.9)
Genome Browser links: Link to NCBI NucleotideLink to NCBI Map Viewer on chromosome 11Link to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11Link to Vega Genome Browser on chromosome 11

Chromosome Start Stop Links
11 111957632 111957683 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11Link to Vega Genome Browser on chromosome 11
11 111958581 111958697 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11Link to Vega Genome Browser on chromosome 11
11 111959591 111959735 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11Link to Vega Genome Browser on chromosome 11
11 111965529 111965694 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11Link to Vega Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternate exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (480 nt):
ATGGCGGTTCTCTGGAGGCTGAGTGCCGTTTGCGGTGCCCTAGGAGGCCGAGCTCTGTTGCTTCGAACTC
CAGTGGTCAGACCTGCTCATATCTCAGCATTTCTTCAGGACCGACCTATCCCAGAATGGTGTGGAGTGCA
GCACATACACTTGTCACCGAGCCACCATTCTGGCTCCAAGGCTGCATCTCTCCACTGGACTAGCGAGAGG
GTTGTCAGTGTTTTGCTCCTGGGTCTGCTTCCGGCTGCTTATTTGAATCCTTGCTCTGCGATGGACTATT
CCCTGGCTGCAGCCCTCACTCTTCATGGTCACTGGGGCCTTGGACAAGTTGTTACTGACTATGTTCATGG
GGATGCCTTGCAGAAAGCTGCCAAGGCAGGGCTTTTGGCACTTTCAGCTTTAACCTTTGCTGGGCTTTGC
TATTTCAACTATCACGATGTGGGCATCTGCAAAGCTGTTGCCATGCTGTGGAAGCTCTGA

Translation (159 aa):
MAVLWRLSAVCGALGGRALLLRTPVVRPAHISAFLQDRPIPEWCGVQHIHLSPSHHSGSKAASLHWTSER
VVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYVHGDALQKAAKAGLLALSALTFAGLC
YFNYHDVGICKAVAMLWKL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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