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Report for CCDS51395.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51395.1 Public Mus musculus 4 A430005L14Rik 23 108 98 CCDS HistoryNCBI Gene:97159Re-query CCDS DB by CCDS ID:51395.1Re-query CCDS DB by GeneID:97159See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 51395.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105645.8 ENSMUSP00000101270.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105645.8Link to Ensembl Protein Viewer:ENSMUSP00000101270.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000105645Re-query CCDS DB by Protein ID:ENSMUSP00000101270
Original member Current member NCBI NM_001163019.1 NP_001156491.1 Accepted alive Link to Nucleotide Sequence:NM_001163019.1Link to Protein Sequence:NP_001156491.1Re-query CCDS DB by Nucleotide ID:NM_001163019Re-query CCDS DB by Protein ID:NP_001156491Link to BLAST:NP_001156491.1

Chromosomal Locations for CCDS 51395.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 153957308 153957322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153960531 153960992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 153961490 153961591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (579 nt):
ATGAGGAGCAGGAAGGCTTCCTCATCACACAAAGCTACGGACAGACGAACTTCCAAAAAGTTCAAGTATG
ACAAAGGTCACCTTGTGAAGGCAGAATTACAAAAACTTGACCCTAAGAGTGACATTTCTTCTTTGCCAAA
AGTGGCCCCCGTGGCTCCTTGTGAAAATAAGTTTGCGGAGGACAGTGCTGAGGCTGCTGTCTCTGTACCA
GAGAGCAGAGAGCCGCCTCAGGGCTGCTCCACGCCTGCGAGTGAGGAACCCTCAGTAAAGGCTGAGAATG
GCCTGTCCACAGAACCCAGCAGTGCCGCTGCAGCCCAGGAGCCCGATGACAGCTCTGCCGGACAGGCAGA
GCCTGTGCCCAGGACAGAGGAGGTGCGGGCATCCGTGCTTCAGATGGACAGCAGCATCTTTCTAGATGAT
GACAGCAACCAGCCCATGCCTGTGAGTCGCTTCTTCGGGAATGTCGAGCTTATGCAGGATCTGCCACCAG
CCTCTTCATCTTATCCTTCCATGAGCAGAAGAGAATTCAGAAAAATGCACTTCAGAGCCAAAGATGACGA
GGATGACGCTGAGGGGTAG

Translation (192 aa):
MRSRKASSSHKATDRRTSKKFKYDKGHLVKAELQKLDPKSDISSLPKVAPVAPCENKFAEDSAEAAVSVP
ESREPPQGCSTPASEEPSVKAENGLSTEPSSAAAAQEPDDSSAGQAEPVPRTEEVRASVLQMDSSIFLDD
DSNQPMPVSRFFGNVELMQDLPPASSSYPSMSRREFRKMHFRAKDDEDDAEG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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