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Report for CCDS49737.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49737.1 Public Mus musculus 15 Eif4b 23 108 98 CCDS HistoryNCBI Gene:75705Re-query CCDS DB by CCDS ID:49737.1Re-query CCDS DB by GeneID:75705See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49737.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000169681.2 ENSMUSP00000127774.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000169681.2Link to Ensembl Protein Viewer:ENSMUSP00000127774.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000169681Re-query CCDS DB by Protein ID:ENSMUSP00000127774
Original member Current member NCBI NM_145625.3 NP_663600.2 Accepted alive Link to Nucleotide Sequence:NM_145625.3Link to Protein Sequence:NP_663600.2Re-query CCDS DB by Nucleotide ID:NM_145625Re-query CCDS DB by Protein ID:NP_663600Link to BLAST:NP_663600.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663600.2 611 Q8BGD9 611 100% 0 0

Chromosomal Locations for CCDS 49737.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 102073951 102073963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102081976 102082113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102084161 102084369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102084679 102084795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102086003 102086057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102086505 102086639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102088616 102088753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102088857 102089030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102089866 102090094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102091397 102091494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102092986 102093199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102093658 102093713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102094672 102094777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102094977 102095049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102095253 102095333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1836 nt):
ATGGCGGCCTCAGCAAAAAAGAAGAATAAGAAGGGGAAGACCATCTCCCTAACGGACTTTCTAGCTGAGG
AT
GGAGGAACTGGTGGAGGAAGCACCTATGTCCCCAAACCAGTCAGCTGGGCTGATGAAACAGACGATCT
G
GAAGGAGATGTGTCAACAACTTGGCATAGTAACGATGATGACGTGTACAGGGCGCCTCCAATTGACCGT
TCC
ATCCTTCCCACTGCTCCACGGGCTGCTCGGGAACCCAATATTGACCGGAGCCGTCTTCCCAAGTCGC
CA
CCCTACACTGCTTTCCTAGGGAATCTGCCCTATGATGTGACAGAAGACTCCATTAAGGATTTCTTTAG
A
GGATTAAATATCAGCGCTGTACGCTTACCACGGGAACCCAGCAATCCAGACAGGTTGAAAGGTTTCGGC
TAC
GCAGAATTTGAGGACCTGGATTCTCTGCTCAGTGCTCTGAGTCTCAATGAAGAGTCTCTAGGTAACA
GG
AGAATTCGTGTGGATGTTGCTGATCAAGCACAGGATAAAGACAGGGATGACCGTTCTTTTGGTCGAGA
T
AGAAATCGGGATTCTGACAAAACAGACACAGACTGGAGGGCCCGTCCCACCACAGACAGTTTTGATGAC
TAC
CCACCTAGAAGAGGCGATGATAGCTTTGGAGACAAGTATCGAGATCGTTACGATTCAGACCGGTATC
GG
GATGGGTATAGGGACGGATATCGGGACGGCCCACGCAGAGACATGGACCGCTATGGGGGCCGGGATCG
C
TATGATGACCGAGGCAGCAGAGACTATGACCGAGGCTATGACTCCAGGATAGGCAGTGGCAGAAGGGCA
TTT
GGAAGTGGGTACCGGAGAGATGATGACTACAGAGGAGGTGGGGACCGCTATGAAGACCGCTATGACA
GA
CGGGATGATCGGTCGTGGAGCTCCAGGGATGACTACTCTCGGGATGATTATAGGCGTGATGACAGAGG
T
CCCCCCCAGAGACCCAGACTGAACCTCAAGCCTCGAAGCGCTCCTAAGGAGGATGACGCCTCCGCCAGC
ACC
TCCCAGTCCAGCCGGGCAGCCTCCATCTTTGGAGGGGCGAAGCCTGTTGACACAGCTGCTAGGGAAA
GA
GAAGTAGAGGAGCGGCTACAGAAGGAGCAGGAGAAGCTGCAGCGTCAGCTGGATGAGCCAAAACTAGA
C
CGCCGGCCCCGGGAGAGACACCCAAGCTGGCGAAGTGAAGAAACTCAGGAAAGAGAACGGTCAAGGACA
GGA
AGTGAGTCATCGCAGACTGGGGCCTCAGCCACATCTGGCAGAAATACACGAAGGAGAGAGAGTGAGA
AG
TCTCTAGAAAATGAAACCCTCAATAAAGAAGAAGACTGTCACTCTCCAACCTCTAAGCCTCCTAAACC
T
GACCAGCCTCTAAAGGTAATGCCAGCCCCTCCACCAAAGGAGAATGCGTGGGTGAAGCGAAGCTCTAAC
CCT
CCTGCCCGATCTCAGAGCTCAGACACAGAGCAGCCGTCCCCTACAAGTGGTGGAGGGAAAGTAGCTG
CA
GTCCAGCCCCCTGAGGAAGGACCATCAAGAAAAGATGGAAATAAAGTGGATGTGGTGGGTGCCACACA
A
GGCCAAGCTGGAAGCTGCAGCCGTGGTCCCGGGGATGGAGGGAGCAGAGACCACTGGAAGGACTTGGAT
AG
G
AAGGATGGCAAAAAAGATCAAGACTCCAGATCTGCGCCTGAGCCAAAGAAACCTGAGGAGAACCCAG
CC
TCTAAGTTCAGCTCTGCAAGCAAGTACGCTGCTCTGTCTGTGGATGGCGAGGATGAGGATGAGGGCGA
C
GACTGCACTGAGTAG


Translation (611 aa):
MAASAKKKNKKGKTISLTDFLAEDGGTGGGSTYVPKPVSWADETDDLEGDVSTTWHSNDDDVYRAPPIDR
S
ILPTAPRAAREPNIDRSRLPKSPPYTAFLGNLPYDVTEDSIKDFFRGLN
ISAVRLPREPSNPDRLKGFG
Y
AEFEDLDSLLSALSLNEE
SLGNRRIRVDVADQAQDKDRDDRSFGRDRNRDSDKTDTDWRARPTTDSFDD
Y
PPRRGDDSFGD
KYRDRYDSDRYRDGYRDGYRDGPRRDMDRYGGRDRYDDRGSRDYDRGYDSRIGSGRRA
F
GSGYRRDDDYRGGGDRYEDRYDRRDDRSWSSRDDYSRDDYRRDDR
GPPQRPRLNLKPRSAPKEDDASAS
T
SQSSRAASIFGGAKPVDTAAREREVEERLQKEQEKLQRQLDEPKLDRRPRE
RHPSWRSEETQERERSRT
G
SESSQTGASATSGR
NTRRRESEKSLENETLNKEEDCHSPTSKPPKPDQPLKVMPAPPPKENAWVKRSSN
P
PARSQSSDTEQPSPT
SGGGKVAAVQPPEEGPSRKDGNKVDVVGATQGQAGSCSRGPGDGGSRDHWKDLD
R
KDGKKDQDSRSAPEPKKPEENPASKFSSASKYAALSVDGEDEDEGDDCTE



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser