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Report for CCDS40444.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40444.1 Public Mus musculus 8 Drc7 23 108 98 CCDS HistoryNCBI Gene:330830Re-query CCDS DB by CCDS ID:40444.1Re-query CCDS DB by GeneID:330830See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40444.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058479.6 ENSMUSP00000053972.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058479.6Link to Ensembl Protein Viewer:ENSMUSP00000053972.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000058479Re-query CCDS DB by Protein ID:ENSMUSP00000053972
Original member Current member NCBI NM_001042715.3 NP_001036180.2 Accepted alive Link to Nucleotide Sequence:NM_001042715.3Link to Protein Sequence:NP_001036180.2Re-query CCDS DB by Nucleotide ID:NM_001042715Re-query CCDS DB by Protein ID:NP_001036180Link to BLAST:NP_001036180.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001036180.2 876 Q6V3W6-1 876 100% 0 0

Chromosomal Locations for CCDS 40444.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 95056009 95056214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95056601 95056775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95058395 95058520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95059025 95059219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95061713 95061871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95062177 95062395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95068049 95068180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95070403 95070475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95071241 95071369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95071543 95071671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95072742 95072962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95074116 95074331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95074993 95075103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95075204 95075314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95076250 95076444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95077673 95077812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95077896 95077989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2631 nt):
ATGGAGGTCCTGAGAGAGAAAGTGGAGGAGGAGGAGGAGGCTGAGCGTGAAGAAGCAGCCGAGAGGGCCG
AACGGACTGAGAAGCTGGAGAGGGTGACAAAGTCCGCCGAAGTGAGCAGAGAGGGGACCATCCTGAGCCA
GGATGAGCTTCGAGACCTGGAGGGGAAGCTGATGGCCATCGAGATCCCTACCCAAGCTGATCACTCGGTC
ATAAGCCAGGCCCCTGTTGATGTCACCAAGCTGCCTCCTTCCTATACCACCAACTCATTGAAGGAGGAGC
ACCTGCTGCTGGTGGCAGACAACTTCTCCCGCCAGTACAGCCACCTGTGTCCAGACCGCGTGCCTCTCTT
CTTGCACCCGTTAAATGAGTGCAATGTGCCTAAGTTCGTGAGCACCACCCTGAGGCCCACACTGATGCCC
TACCCTGAACTCTACAACTGGGACAGCTGCGCCCAGTTTGTATCTGACTTCCTCACCATGGTCCCACTGG
TTGATCCCCTCAAGCCGCCCACGCACTTATATTCCTCGACCACCGTGCTCAAGTGCCAGAAGGGAAACTG
CTTTGACTTCAGCACCCTGCTCTGCTCCATGTTGATTGGCTCCGGCTATGATGCCTACTGCGTCAATGGC
TATGGCTCACTGGACCTGTGCCTCATGGACCTGACAAGGGAAGTGTGTCCGCTCACTGTGAAGGCCAAAG
AGATAGTCAAGAAGAAAGAGAAGACGGTGCCTAAGAAATACTCCATCAAGCCGCCCCGGGACCTGACCAG
CAAGTTTGAGCAGGAGCAAGAGGAGAAGAGAATACAGGAGATCAAGGATCTAGAACAAAGGCGACTTAAG
GAAGAGGAAGATCGCATCCTGGAGGCAGAGAAAGCGAAGCCCGACCCCCTGCATGGCCTGCGGGTACACT
CCTGGGTCCTGGTGCTGGCAGGAAAGCGAGAGGTGCCTGAGAGCTTCTTCATCGACCCTCTGACTGCACG
CAGCTACAGTACCAAGGATGAGCACTTCCTGGGCATTGAGAGCCTCTGGAACCACAAGAACTACTGGATC
AACATGCAGGATTGCTGGAACTGCTGCAAGGACTTGATCTTCGACCTGGGAGACCCTGTAAGATGGGAGT
ACATGCTCTTGGGGACCGATAAGCCTCACCTGTCCTTGACTGAGGAGGATGAAGAAGGGCTGGATGATGA
TGATGATGATGTGGAAGACCTGGGCAAAGAAGAGGAGGATAAGAGCTTTGACATGCCGTCTTCGTGGGTC
TCCCAGATTGAGATCACCCCAGAAGAGTTTGAGACCCGTTGTCCCAGTGGGAAGAAAGTGATACAGTACA
AGAAGGCACAGCTGGAGAAGTGGTCCCCATACCTCAACAACAACGGCCTGGTGTGTCGCCTCACCACCTA
CGAGGACCAACAGTGCACAAAGGTTCTAGAGATAAAGGAGTGGTACCAGAACCGGGAGGATATGCTAGAG
CTGAAGCACATCAACAAGACCACAGGCCTGCACGTGGACTACTTCAAGCCAGGCCATCCCCAAGCTCTGT
GTGTGCACTCATACAAGTCTATGCTACCTGAGATGGACCGCGTCATGGAGTTCTATAAAAAAATCCGTGT
GGATGGCCTGGTGAAGCGGGAGGAGACGCCCATGACAATGACCGAGTACTATGAAGGGCGCTCCGACTTC
CTTGCCTATCGGCACGTCAATTTTGGACCCAGAGTCAAGAAGCTCAGCCAGAGCAGCGTGGAGTCGAACC
CAAGGCCCATGGTGAAAATCACAGAGCGGTTCTCCCGCAATCCAGAGAAGCCCGCGGATGAGGACGTGGC
AGAGCGTTTGTTTCTGATAGTGGAAGAGCGCATCCAGCTTCGCTACCATTGCCGCGACGACTACATCACC
GCATCCAAGCGAGAGTTCCTGCGGCGCATGGAGGTCGACAGCAAGGGAAACAAGATCATCATGACACCAG
AAATGTGCATCAGCTACGAGGTAGAGCCGATGGAGCACACTAAGAAACTCCTCTACCAGTACGAGACCAT
GAATCAGCTGAAGAACGAAGAAAAGCTGTCCCGACATCAGGCCTGGGAGTCGGAGCTGGAGGTGCTGGAG
ATTTTGAAGCTCCGTGAAGAGGAGGAGGAGGCACACACGCTGACCATCTCCATCTACGACACCAAGCGCA
ACGAGAAGAGCAAAGAGTATCGGGAGGCCATGGAGCGCGTCTTGCATGAGGAGCACCTGCGGCAGGTGGA
GGCCCAGCTGGACTACCTGGCCCCATTCCTGGCCCAGCTCCCTCCAGGCGAGAAGCTAACCCGTTGGCAG
GCGGTGCGTCTCAAGGACGAGTGTCTCAGCGACTTCAAGCAGCGGCTCATCGACAAGGCTAACCTCATCC
AGGCTCGCTTTGAGAAGGAGACCCAGGAGCTGCAGAAGAAGCAGCAATGGTACCAGGAGAACCAGGTAAC
CCTGACGCCGGAGGATGAAAACCTGTACCTGAGCTACTGTTCTCAGGCCATGTTCCGCATCCGAATCTTG
GAACAGCGGCTCAATCGGCACAAAGAGCTGGCTCCACTGAAGTACCTGGCGCTGGAGGAAAAGCTCTACA
AAGACCCACGCTTAATAGACTTCGTAAAAGTCTTTGTTTGA

Translation (876 aa):
MEVLREKVEEEEEAEREEAAERAERTEKLERVTKSAEVSREGTILSQDELRDLEGKLMAIEIPTQADHSV
ISQAPVDVTKLPPSYTTNSLKEEHLLLVADNFSRQYSHLCPDRVPLFLHPLNECNVPKFVSTTLRPTLMP
YPELYNWDSCAQFVSDFLTMVPLVDPLKPPTHLYSSTTVLKCQKGNCFDFSTLLCSMLIGSGYDAYCVNG
YGSLDLCLMDLTREVCPLTVKAKEIVKKKEKTVPKKYSIKPPRDLTSKFEQEQEEKRIQEIKDLEQRRLK
EEEDRILEAEKAKPDPLHGLRVHSWVLVLAGKREVPESFFIDPLTARSYSTKDEHFLGIESLWNHKNYWI
NMQDCWNCCKDLIFDLGDPVRWEYMLLGTDKPHLSLTEEDEEGLDDDDDDVEDLGKEEEDKSFDMPSSWV
SQIEITPEEFETRCPSGKKVIQYKKAQLEKWSPYLNNNGLVCRLTTYEDQQCTKVLEIKEWYQNREDMLE
LKHINKTTGLHVDYFKPGHPQALCVHSYKSMLPEMDRVMEFYKKIRVDGLVKREETPMTMTEYYEGRSDF
LAYRHVNFGPRVKKLSQSSVESNPRPMVKITERFSRNPEKPADEDVAERLFLIVEERIQLRYHCRDDYIT
ASKREFLRRMEVDSKGNKIIMTPEMCISYEVEPMEHTKKLLYQYETMNQLKNEEKLSRHQAWESELEVLE
ILKLREEEEEAHTLTISIYDTKRNEKSKEYREAMERVLHEEHLRQVEAQLDYLAPFLAQLPPGEKLTRWQ
AVRLKDECLSDFKQRLIDKANLIQARFEKETQELQKKQQWYQENQVTLTPEDENLYLSYCSQAMFRIRIL
EQRLNRHKELAPLKYLALEEKLYKDPRLIDFVKVFV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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