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Report for CCDS39698.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39698.1 Public Mus musculus 6 Abcc9 16 104 75 CCDS HistoryNCBI Gene:20928Re-query CCDS DB by CCDS ID:39698.1Re-query CCDS DB by GeneID:20928

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Sequence IDs included in CCDS 39698.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENSMUST00000111771 ENSMUSP00000107401 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000111771Link to Ensembl Protein Viewer:ENSMUSP00000107401Re-query CCDS DB by Nucleotide ID:ENSMUST00000111771Re-query CCDS DB by Protein ID:ENSMUSP00000107401
Original member Current member NCBI NM_001044720.1 NP_001038185.1 Accepted alive Link to Nucleotide Sequence:NM_001044720.1Link to Protein Sequence:NP_001038185.1Re-query CCDS DB by Nucleotide ID:NM_001044720Re-query CCDS DB by Protein ID:NP_001038185Link to BLink:NP_001038185.1

Chromosomal Locations for CCDS 39698.1

Assembly GRCm38.p2 (GCF_000001635.22)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to NCBI Map Viewer on chromosome 6Link to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

Chromosome Start Stop Links
6 142594005 142594142 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142594709 142594771 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142598108 142598241 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142599054 142599157 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142600908 142601016 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142601776 142601854 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142603047 142603177 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142604830 142604950 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142605819 142605920 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142614414 142614516 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142620683 142620775 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142625937 142626094 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142627189 142627258 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142627473 142627621 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142628423 142628652 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142633085 142633181 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142639192 142639317 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142639448 142639585 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142644275 142644355 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142645886 142645970 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142646272 142646373 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142652527 142652632 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142656603 142656675 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142658498 142658602 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142664532 142664640 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142671541 142671683 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142672595 142672635 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142675401 142675563 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142679219 142679353 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142681989 142682144 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142682859 142683017 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142685000 142685182 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142687199 142687441 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142688964 142689130 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142692781 142692902 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142694477 142694618 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142697679 142697820 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternate exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4602 nt):
ATGAGCCTTTCTTTTTGTGGGAACAACATCTCCTCCTACAACATCTATTATGGTGTTCTCCAAAACCCCT
GC
TTTGTGGACGCACTCAACCTGGTCCCACATGTCTTCCTGCTGTTTATCACCTTTCCAATACTGTTCAT
T
GGATGGGGGAGCCAAAGCTCAAAAGTGCAAATTCATCATAACACGTGGCTTCATTTTCCCGGACACAAC
CTG
AGATGGATTCTGACGTTTGCGCTCCTGTTTGTGCATGTTTGTGAGATAGCGGAAGGCATCGTTTCAG
AC
TCGCATCGGGCGTCCAGGCATCTCCACCTTTTCATGCCGGCTGTGATGGGATTTGTCGCCACAACAAC
G
TCCATCGTCTATTATCATAACATTGAAACATCAAATTTCCCTAAATTACTTTTAGCTTTATTCCTGTAC
TGG
GTAATGGCCTTTATTACAAAGACGATAAAGTTGGTCAAATACTGGCAGTTGGGGTGGGGAGTGTCAG
AC
CTGCGCTTCTGCATCACAGGAGTGATGGTCATCTTGAATGGGCTGCTGATGGCTGTGGAGATCAATGT
C
ATCCGGGTCAGAAGATATGTTTTCTTCATGAATCCCCAGAAAGTGAAGCCTCCGGAAGACCTCCAGGAC
CTG
GGCGTGAGGTTCCTCCAGCCATTTGTGAATTTACTGTCCAAAGCTACTTACTGGTGGATGAACACAC
TT
ATCATATCAGCTCACAGGAAACCTATCGATCTGAAGGCGATTGGAAAGTTGCCGATAGCGATGAGGGC
G
GTGACCAATTATGTCTGCCTAAAGGAAGCCTATGAAGAGCAGAAGAAAAAGGCTGCCGATCATCCAAAT
CGG
ACTCCCTCCATATGGCTGGCCATGTACAGAGCTTTTGGGAGACCAATCCTGCTGAGCAGCACATTCC
GG
TACTTGGCTGACTTGCTGGGGTTTGCTGGTCCTCTTTGTATATCTGGGATAGTCCAGCGAGTAAATGA
A
AAGACTAACACAACAAGAGAAATGTTTCCAGAGACACTCTCATCAAAGGAATTTCTGGAAAACGCCCAT
GTG
CTGGCTGTCCTGCTTTTCCTGGCCCTTATCCTACAGAGGACCTTTCTGCAGGCTTCCTACTATGTGA
CC
ATAGAGACCGGCATCAACCTCCGTGGGGCTCTGCTGGCTATGATATACAATAAAATCCTTCGGCTCTC
G
ACTTCTAACCTATCCATGGGTGAGATGACCCTGGGACAGATCAACAACTTGGTTGCCATAGAAACCAAT
CAG
CTCATGTGGTTCTTGTTCCTGTGTCCCAATCTGTGGGCCATGCCTGTTCAGATCATAATGGGGGTGA
TC
CTGCTCTACAATTTGCTTGGGTCGAGTGCACTGGTTGGCGCTGCAGTCATTGTGCTCCTTGCACCGAT
T
CAGTACTTCATTGCCACGAAGCTGGCGGAGGCTCAGAAGAGCACTCTGGATTATTCCACCGAGAGGTTG
AAG
AAGACGAATGAGATACTGAAGGGCATCAAACTCCTTAAGCTGTACGCCTGGGAGCACATTTTCTGCA
AG
AGCGTGGAGGAGACACGAATGAAGGAGCTCTCCAGCCTCAAAACCTTCGCGCTCTACACGTCACTTTC
C
ATCTTCATGAACGCAGCAATTCCCATCGCAGCTGTTCTTGCGACATTTGTGACACATGCGTACGCCAGT
GGA
AACAACCTGAAGCCTGCAGAGGCCTTTGCCTCTCTGTCTCTCTTCCACATCCTCGTCACACCGCTCT
TC
CTGCTGTCCACGGTGGTCAGATTCGCAGTCAAAGCCATCATCAGTGTTCAAAAGCTGAATGAGTTTCT
C
TTGAGCGATGAGATTGGTGAGGACAGCTGGAGGGCCGGGGAGGGCACGCTGCCTTTCGAGTCCTGTAAG
AAG
CACACCGGAGTGCAATCAAAACCAATAAACAGGAAGCAGCCTGGACGGTACCACCTGGACAGCTACG
AG
CAAGCACGGCGCCTCCGGCCCGCTGAGACGGAAGACATTGCCATAAAGGTGACAAATGGATACTTCTC
A
TGGGGCAGTGGTTTAGCTACATTGTCCAATATTGACATTCGAATTCCAACAGGTCAGCTAACCATGATT
GTA
GGCCAAGTGGGTTGTGGAAAATCATCTCTTCTCCTTGCCATCCTTGGTGAGATGCAGACCCTGGAAG
GA
AAAGTTTACTGGAACAACAGAAGCAGGTATTCTGTGGCTTACGCTGCCCAGAAGCCTTGGCTCCTAAA
T
GCTACAGTTGAGGAAAATATCACTTTTGGAAGTCCTTTCAACAGACAGAGGTACAAGGCTGTCACCGAT
GCC
TGCTCTCTTCAGCCAGACATTGATTTGCTACCATTTGGAGACCAAACTGAAATCGGAGAGAGGGGCA
TC
AACCTGAGTGGGGGTCAGAGGCAGAGAATCTGCGTGGCACGGGCACTCTACCAAAACACCAACATCGT
C
TTTTTGGACGACCCATTCTCTGCCCTGGACATCCACCTGAGCGATCATTTGATGCAGGAAGGAATCCTG
AAG
TTTCTCCAGGATGACAAGAGGACGGTTGTTCTTGTGACGCACAAACTGCAGTACCTGACGCACGCTG
AC
TGGATCATAGCCATGAAGGATGGCAGTGTGTTAAGGGAAGGGACTTTGAAAGACATTCAGACCAAAGA
C
GTGGAGCTTTATGAACACTGGAAAACCCTCATGAATAGACAGGATCAAGAATTAGAAAAGGACATGGAA
GCA
GACCAAACAACACTGGAGAGGAAGACTCTCCGGAGAGCCATGTATTCAAGAGAGGCCAAGGCACAGA
TG
GAGGATGAAGATGAAGAGGAGGAAGAGGAGGAAGATGAGGAAGATAACATGTCAACGGTGATGAGGCT
C
AGGACCAAGATGCCCTGGAAGACCTGCTGGTGGTACCTCACTTCAGGAGGGTTTTTTCTGCTCTTCCTC
ATG
ATCTTCTCCAAGCTTTTGAAGCACTCGGTGATTGTGGCTATAGACTACTGGCTAGCTACGTGGACAT
CC
GAATACAGTATAAACCATCCTGGAAAAGCTGACCAGACCTTCTATGTGGCTGGGTTCAGCATCCTCTG
T
GGAGCAGGCATTTTCCTTTGCCTCGTCACCTCCCTCACCGTGGAATGGATGGGCCTCACAGCCGCCAAG
AAC
CTCCACCACAACCTCCTCAATAAGATAATTCTCGGGCCAATAAGGTTCTTTGATACCACACCGCTGG
GG
CTGATCCTCAATCGGTTTTCTGCTGATACGAACATCATCGACCAGCATATCCCTCCGACCTTGGAGTC
G
CTGACGCGCTCCACCCTGCTCTGCCTGTCTGCTATTGGGATGATCTCCTATGCTACACCCGTGTTTCTC
GTC
GCCCTTGCGCCCCTGGGTGTAGCCTTTTATTTCATCCAGAAATACTTCCGGGTTGCCTCTAAGGATC
TC
CAGGAACTTGACGACAGCACCCAGCTCCCCCTGCTTTGTCACTTCTCAGAAACAGCTGAAGGGCTCAC
C
ACTATCCGGGCCTTCAGGCATGAAACCAGATTCAAGCAACGCATGCTGGAGCTGACAGACACGAACAAC
ATT
GCCTACTTATTTCTCTCAGCAGCCAACAGATGGCTGGAGGTCAGGACGGACTATCTGGGAGCGTGCA
TT
GTTCTGACAGCCTCCATTGCATCCATTAGTGGCTCTTCCAACTCTGGACTGGTGGGCTTGGGCCTTCT
C
TATGCCCTCACGATAACCAATTACCTAAATTGGGTTGTAAGGAACTTGGCCGACCTGGAAGTCCAGATG
GGT
GCAGTGAAGAAAGTGAACAGTTTCTTGACTATGGAGTCCGAGAACTATGAAGGCACCATGGATCCTT
CT
CAAGTCCCAGAGCACTGGCCACAGGAAGGCGAGATCAAGATTCACGATCTGTGTGTCAGATATGAAAA
T
AACCTGAAGCCCGTTCTGAAACATGTCAAGGCTTACATCAAACCCGGGCAGAAGGTGGGCATCTGTGGT
CGA
ACTGGCAGTGGGAAGTCCTCCTTATCCCTGGCTTTCTTCAGAATGGTCGACATATTTGACGGAAAGA
TA
GTCATTGATGGGATAGACATCTCCAAACTGCCCTTGCACACGCTCCGCTCCAGGCTGTCCATCATTCT
C
CAGGACCCAATCCTGTTCAGCGGCTCCATCAGGTTTAACCTGGATCCTGAATGCAAGTGCACAGATGAC
AGG
CTCTGGGAGGCTCTAGAAATTGCCCAGCTGAAGAATATGGTCAAATCTCTGCCCGGAGGCTTAGATG
CC
ACTGTCACCGAAGGTGGTGAGAACTTCAGTGTTGGACAGAGACAGCTGTTCTGCCTGGCCAGGGCCTT
T
GTTCGGAAGAGCAGTATACTCATCATGGATGAAGCCACTGCTTCCATCGACATGGCCACGGAAAACATT
TTG
CAGAAAGTAGTCATGACAGCCTTTGCGGATCGCACGGTCGTAACCATAGCTCACCGTGTCTCTTCTA
TT
GTGGATGCAGGCCTTGTTTTAGTCTTTTCTGAGGGTATTTTAGTGGAGTGTGATACTGGTCCAAACCT
G
CTCCAGCACAAGAATGGCCTCTTTTCTACTTTGGTGATGACCAACAAGTAG


Translation (1533 aa):
MSLSFCGNNISSYNIYYGVLQNPCFVDALNLVPHVFLLFITFPILFIGWGSQSSKVQIHHNTWLHFPGHN
L
RWILTFALLFVHVCEIAEGIVSD
SHRASRHLHLFMPAVMGFVATTTSIVYYHNIETSNFPKLLLALFLY
W
VMAFITKTIKLVKYWQLGWGVSDLRFCITGVMVILNGLLMAVEINVIRVR
RYVFFMNPQKVKPPEDLQD
L
GVRFLQPFVNLLSKATYWWMNTLIISAHRKPIDLKAIGKLPIAMRAVTNYVCLKEAYEEQK
KKAADHPN
R
TPSIWLAMYRAFGRPILLSSTFRYLADLLGFAGPLCISGIVQRVNEKTNTTR
EMFPETLSSKEFLENAH
V
LAVLLFLALILQRTFLQASYYVTIETGINLRGALL
AMIYNKILRLSTSNLSMGEMTLGQINNLVAIETN
Q
LMWFLFLCPNLWAMPVQ
IIMGVILLYNLLGSSALVGAAVIVLLAPIQYFIATKLAEAQKSTLDYSTERL
K
KTNEILKGIKLLKLYAWEHIFCKSVEETRMKELSSLKTFALYTSLS
IFMNAAIPIAAVLATFVTHAYAS
G
NNLKPAEAFASLSLFHILVTPLFLLSTVVRFAVKAII
SVQKLNEFLLSDEIGEDSWRAGEGTLPFESCK
K
HTGV
QSKPINRKQPGRYHLDSYEQARRLRPAETEDIAIKVTNGYFSWGSGLATLSNIDIRIPTGQLTMI
V
GQVGCGKSSLLLAILGEMQTLEGKVYWN
NRSRYSVAYAAQKPWLLNATVEENITFGSPFNRQRYKAVTD
A
CSLQPDIDLLPFGDQTEIGER
GINLSGGQRQRICVARALYQNTNIVFLDDPFSALDIHLSDHLMQEGIL
K
FLQDDKRTVVLVTHKLQYLTHADW
IIAMKDGSVLREGTLKDIQTKDVELYEHWKTLMNRQDQELEKDME
A
DQTTLERKTLRRAMYSREAKAQMEDEDE
EEEEEEDEEDNMSTVMRLRTKMPWKTCWWYLTSGGFFLLFL
M
IFSKLLKHSVIVAIDYWLATWTSEYSINHPGKADQ
TFYVAGFSILCGAGIFLCLVTSLTVEWMGLTAAK
N
LHHNLLNKIILGPI
RFFDTTPLGLILNRFSADTNIIDQHIPPTLESLTRSTLLCLSAIGMISYATPVFL
V
ALAPLGVAFYFIQKYFRVAS
KDLQELDDSTQLPLLCHFSETAEGLTTIRAFRHETRFKQRMLELTDTNN
I
AYLFLSAANRWLEVRT
DYLGACIVLTASIASISGSSNSGLVGLGLLYALTITNYLNWVVRNLADLEVQM
G
AVKKVNSFLTMESENYEGTM
DPSQVPEHWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICG
R
TGSGKSSLSLAFFRMVDIFD
GKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDD
R
LWEALEIAQLKNMVKSLPGGL
DATVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENI
L
QKVVMTAFADRTVVTIA
HRVSSIVDAGLVLVFSEGILVECDTGPNLLQHKNGLFSTLVMTNK



Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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