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Report for CCDS35771.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35771.1 Public Mus musculus 1 Cfap126 23 108 98 CCDS HistoryNCBI Gene:75472Re-query CCDS DB by CCDS ID:35771.1Re-query CCDS DB by GeneID:75472See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35771.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027959.10 ENSMUSP00000027959.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027959.10Link to Ensembl Protein Viewer:ENSMUSP00000027959.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000027959Re-query CCDS DB by Protein ID:ENSMUSP00000027959
Original member NCBI NM_001081275.1 NP_001074744.1 Updated not alive Link to Nucleotide Sequence:NM_001081275.1Link to Protein Sequence:NP_001074744.1Re-query CCDS DB by Nucleotide ID:NM_001081275Re-query CCDS DB by Protein ID:NP_001074744
Current member NCBI NM_001081275.2 NP_001074744.1 Accepted alive Link to Nucleotide Sequence:NM_001081275.2Link to Protein Sequence:NP_001074744.1Re-query CCDS DB by Nucleotide ID:NM_001081275Re-query CCDS DB by Protein ID:NP_001074744Link to BLAST:NP_001074744.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074744.1 189 Q6P8X9 189 100% 0 0

Chromosomal Locations for CCDS 35771.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 171123167 171123193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171125034 171125096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171125270 171125350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171126034 171126210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171126564 171126785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (570 nt):
ATGGCCACTAACTACAGTGCCAACCAGTATGAAAAAGCTTACTTACCCACGTACCTGCAGAACTGGTCTC
CTGCCAGGCCAACGAAAGAGAAAATCGCTGCCCATGAAGGTTACACTCAGATCATCGCCAACGATCGAGG
GCATCTCTTGCCTTCAGTGCCCCGTTCCAAGGCAAGTCCTTGGGGTTCCTTCATGGGCACCTGGCAAATG
CCCCTGAAGATCCCACCTGCTAAGGTGACCTTGACCGCCCGTACAACTACAGCTGCCGACAACCTCACCA
AATGGATACACAAGAATCCTGATCTACTCAACGCCTGTAATGGGCTGCGTCCTGAAATCTCAGGCAAGCC
CTTCGATCCTGACAGTCAGACGAAACAGAAGAAATCTGTCACCAAGACTGTACAACAAGCACCAAATCCA
ACCATAATTCCCAGCTCCCCGGTTATCCAAGGAGACAACCCAGATGAACCGCAAAGCTCGCACCCCTCTG
CAGGTCACACTCCAGGTCCCCAAACTCCAGTCAACTCTCCCAACAACCCACCTCCGAGCCCTTGTAAGAG
CACCAAGTAG

Translation (189 aa):
MATNYSANQYEKAYLPTYLQNWSPARPTKEKIAAHEGYTQIIANDRGHLLPSVPRSKASPWGSFMGTWQM
PLKIPPAKVTLTARTTTAADNLTKWIHKNPDLLNACNGLRPEISGKPFDPDSQTKQKKSVTKTVQQAPNP
TIIPSSPVIQGDNPDEPQSSHPSAGHTPGPQTPVNSPNNPPPSPCKSTK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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