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Report for CCDS30191.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30191.2 Public Mus musculus X Zfp185 23 108 98 CCDS HistoryNCBI Gene:22673Re-query CCDS DB by CCDS ID:30191.2Re-query CCDS DB by GeneID:22673See the combined annotation on chromosome X in Sequence Viewer

Public Note for CCDS 30191.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and homology data.

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by CCDS collaboration)

Sequence IDs included in CCDS 30191.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000164800.7 ENSMUSP00000126066.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000164800.7Link to Ensembl Protein Viewer:ENSMUSP00000126066.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000164800Re-query CCDS DB by Protein ID:ENSMUSP00000126066
Original member Current member NCBI NM_009549.3 NP_033575.3 Accepted alive Link to Nucleotide Sequence:NM_009549.3Link to Protein Sequence:NP_033575.3Re-query CCDS DB by Nucleotide ID:NM_009549Re-query CCDS DB by Protein ID:NP_033575Link to BLAST:NP_033575.3

Chromosomal Locations for CCDS 30191.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 72997079 72997112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72997282 72997405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72997738 72997803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72998536 72998574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72998669 72998746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72999251 72999337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73000017 73000100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73000988 73001071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73001405 73001446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73002575 73002658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73003373 73003459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73012440 73012628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73015739 73015849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73016695 73016775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73018374 73018442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73020868 73020970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73028845 73028943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1461 nt):
ATGAGTATTTCTTCCTTAGGAAGTATTGGGAAAGGGAGAACTGTACCATCTGGTGAAGAGGAGCGCAATA
ATATCCTAAGACAGATGAAAGTACGGACTACACTAAAGGGTGACCAGAGCTGGATCACCAAGCATGATGA
CTCTGAGGATCATACCATAGAGCCACTCTCACGTCACAACCGAGCCACATCCTTCTCATCAGTCAGAGAC
GAATCAAATGCCAGGTCTCCAAACGCAAGGGCTCCAGCTGGTTACATAATCCGGGGAGTGTTCACCCGAA
CAATAGATAGCTCTTCTCACTCCCAGCATCGCCCCTCTAAGACCAACGGAGCTCCAAGAAGTGCTTCTGG
GCAGCTGGGAGCAGCTAATTCTGGTCATCCTCTTCAGTCGTCTGGCTATAAGATGACTACGGAAGATTAT
AAGAAACTAGCACCGTACAACATCAGGCGCAGCTCCATATCAGGGACTGAGGAAGAGGAGGTGCCATTCA
CCCCAGATGAGCAGAAACGGAGGTCCCAGGCTGCACTTGGTGTTCTGAGGAAGACAGCCCCCCGGGAGCA
CTCTTACGTCCTCTCAGCAGCTAAGAAGACCACTAGCAGTCCGACCCAGGAGCTGCAGTCGCCATTCCTT
GCAAAAAGGGTTGATGTGGTAGATGAGGACGTCCTTCCTGAGAAAAACCAGGAACCACCTGCTCTGGCAA
GACCTGATCCTGGCCGAAGCAGCTCGACAACCGAGAAGATTGCCCATCGGCAGATTACACCCCCCACAGC
AGAACTCCACCTGGTGGCCCCAGACCTGGAAGCCCTGAGCACTCCAGATTCTTGTGAGGAGAACAATGCA
GCCCCCAAGATCATCAAGGAAATACCTGGCACCCTACAAGATGGACAAAGTGACCCAACTGTGGCTTCTC
AGCAACTTGCAGATCTCAGCATCCTAGAGCCACAGGGTAGCCCCAGTGGAGCCGAGCAGCAAATCAAAGC
CGAGGACTGTACTAACATGCTGATGAGCCCTTCAAGCTGCATGGTCACTGTTACCATCTCTGACACCTCT
GAACAATCTCAATTGTGTGTTCCTGGTGTCTCAAGCAAGGTGGACTCCAGCTCAACTATCAAAGGGATTC
TCTTCGTGAAGGAGTACATGAATACCAGTGAAGTGTCTTCTGGGAAGCCAGTGTCTTCACACTGTGACAG
TCCCAGCAGCATTGAAGACTCATTGGATCTGGCAAAGAAAGCCCCACATGAAGGTACTCCTTCTGAGAGA
CCAACCGAAGGGGTCTGTACTTACTGTAGCCATGAGATCCAAGATTGTCCGAAGATTACCCTTGAACATC
TTGGCATCTGCTGCCATGAGTATTGTTTTAAGTGCGGGATTTGCAATAAACCGATGGGTGATCTCCTAGA
TCAGATCTTCATTCACCGTGACACCATCCACTGTGGGAAATGCTATGAGAAGCTCTTCTAG

Translation (486 aa):
MSISSLGSIGKGRTVPSGEEERNNILRQMKVRTTLKGDQSWITKHDDSEDHTIEPLSRHNRATSFSSVRD
ESNARSPNARAPAGYIIRGVFTRTIDSSSHSQHRPSKTNGAPRSASGQLGAANSGHPLQSSGYKMTTEDY
KKLAPYNIRRSSISGTEEEEVPFTPDEQKRRSQAALGVLRKTAPREHSYVLSAAKKTTSSPTQELQSPFL
AKRVDVVDEDVLPEKNQEPPALARPDPGRSSSTTEKIAHRQITPPTAELHLVAPDLEALSTPDSCEENNA
APKIIKEIPGTLQDGQSDPTVASQQLADLSILEPQGSPSGAEQQIKAEDCTNMLMSPSSCMVTVTISDTS
EQSQLCVPGVSSKVDSSSTIKGILFVKEYMNTSEVSSGKPVSSHCDSPSSIEDSLDLAKKAPHEGTPSER
PTEGVCTYCSHEIQDCPKITLEHLGICCHEYCFKCGICNKPMGDLLDQIFIHRDTIHCGKCYEKLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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