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Report for CCDS27321.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27321.1 Public Mus musculus 14 Spry2 16 104 75 CCDS HistoryNCBI Gene:24064Re-query CCDS DB by CCDS ID:27321.1Re-query CCDS DB by GeneID:24064

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Sequence IDs included in CCDS 27321.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENSMUST00000022709 ENSMUSP00000022709 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022709Link to Ensembl Protein Viewer:ENSMUSP00000022709Re-query CCDS DB by Nucleotide ID:ENSMUST00000022709Re-query CCDS DB by Protein ID:ENSMUSP00000022709
Original member Current member NCBI NM_011897.3 NP_036027.1 Accepted alive Link to Nucleotide Sequence:NM_011897.3Link to Protein Sequence:NP_036027.1Re-query CCDS DB by Nucleotide ID:NM_011897Re-query CCDS DB by Protein ID:NP_036027Link to BLink:NP_036027.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036027.1 315 Q9QXV8 315 100% 0 0

Chromosomal Locations for CCDS 27321.1

Assembly GRCm38.p2 (GCF_000001635.22)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to NCBI Map Viewer on chromosome 14Link to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

Chromosome Start Stop Links
14 105892803 105893750 Link to NCBI NucleotideLink to NCBI Map ViewerLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternate exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGGAGGCCAGAGCTCAGAGTGGCAACGGGTCGCAGCCTTTGCTGCAGACAGCCCATGACAGTGGCAGGC
AG
CGCGGGGAGCCGGATCCAAGAGATGCCCTTACCCAGCAGGTACACGTCTTGTCTCTGGATCAGATCAG
A
GCCATCCGAAACACCAATGAGTACACAGAGGGCCCTACTGTGGTCCCAAGACCTGGGCTCAAGCCTGCT
CCT
CGCCCCTCCACTCAGCACAAACATGAAAGACTCCACGGTCTGCCGGAGCACCGCCAGCCTCCCAGGC
TC
CAGCCCTCGCAGGTCCATTCTTCACGGGCCCCTCTGTCCAGGTCCATCAGCACTGTCAGCTCAGGGTC
T
CGGAGCAGTACAAGGACAAGTACCAGCAGCAGCTCCTCGGAACAGAGACTGTTAGGACCGTCCTTCTCC
CAC
GGGCCTGCTGCTGCTGATGGAATAATCCGAGTGCAGCCTAAATCGGAGCTCAAGCCTGGTGACGTTA
AG
CCACTGAGCAAGGATGATTTGGGTCTGCATGCCTACAGGTGTGAGGACTGCGGCAAGTGCAAGTGTAA
G
GAGTGCACCTACCCGAGGCCCCTGCCGTCGGACTGGATCTGTGACAAGCAGTGCCTCTGCTCAGCCCAG
AAC
GTCATTGACTATGGGACTTGTGTGTGCTGTGTGAAAGGTCTCTTCTATCACTGCTCCAATGACGATG
AG
GACAATTGTGCTGACAACCCGTGCTCTTGCAGCCAGTCCCATTGTTGTACGCGATGGTCAGCGATGGG
A
GTCATGTCTCTCTTTTTGCCTTGTTTATGGTGTTACCTTCCAGCCAAGGGTTGCCTTAAATTGTGCCAG
GGG
TGTTATGACCGAGTGAACAGGCCGGGTTGTCGTTGTAAAAACTCAAATACAGTTTGCTGCAAAGTTC
CC
ACTGTCCCCCCTAGGAACTTTGAAAAGCCGACATAG


Translation (315 aa):
MEARAQSGNGSQPLLQTAHDSGRQRGEPDPRDALTQQVHVLSLDQIRAIRNTNEYTEGPTVVPRPGLKPA
P
RPSTQHKHERLHGLPEHRQPPRLQPSQVHSSRAPLSRSISTVSSGSRSSTRTSTSSSSSEQRLLGPSFS
H
GPAAADGIIRVQPKSELKPGDVKPLSKDDLGLHAYRCEDCGKCKCKECTYPRPLPSDWICDKQCLCSAQ
N
VIDYGTCVCCVKGLFYHCSNDDEDNCADNPCSCSQSHCCTRWSAMGVMSLFLPCLWCYLPAKGCLKLCQ
G
CYDRVNRPGCRCKNSNTVCCKVPTVPPRNFEKPT




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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  VEGA Genome Browser