CCDS Report for Consensus CDS

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Report for CCDS22727.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
22727.1	Reviewed, update pending	Mus musculus	8	Zcchc14	23	108	98

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 22727.1

Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status
EBI	ENSMUST00000046386.4	ENSMUSP00000040360.4	Accepted	alive
NCBI	NM_080855.2	NP_543131.1	Updated	not alive
NCBI	NM_080855.3	NP_543131.2	Pending	alive

Chromosomal Locations for CCDS 22727.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)

Genome Browser links:

Chromosome	Start	Stop
8	121602276	121602331
8	121603808	121605268
8	121605350	121605490
8	121606187	121606317
8	121606877	121606968
8	121608390	121608672
8	121609080	121609134
8	121609221	121609315
8	121610117	121610226
8	121611326	121611397
8	121618635	121618708
8	121628566	121628689
8	121651725	121651901

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2871 nt):
ATGGCCTCTAACCACCCGGCCTTCAGCTTCCACCAGAAGCAGGTGCTGCGCCAGGAGCTCACACAGATCC AGAGCAGCCTGAACAGCGGCGGTGGCGGCGGCGGCGGCGGTGGTGGCGGTGGCAAGAGCGCGCCCGGGCC CAGCGGCGCGCTGCCCACCTGCTCGGCTTGCCACAAGATGGCTCCCAGAACTGAGACCCCTGTCAGCAGC ATCAGCAACAGCCTGGAGAATGCATTGCATACGTCAGCACATTCCACGGAGGAGTCCCTGCCCAAGAGGC CTTTGGGAAAACATGGCAAAGTGAGTGTTGAAAAGATAGACCTGAAGGGGTTGTCACACACGAAAAATGA CAGAAGTGTTGAGTGTTCCTTTGAGGTCTTATGGTCTGATTCTTCAATAACATCAGTAACAAAGTCTTCC TCAGAAGTGACTGAATTTATTTCAAAGCTATCCCAGCTCTGCCCTGAAGAGAACTTGGACAAACTCATTC CTTGCTTGGCTGGCCCAGATTCCTTCTATGTGGAACGTAACCATGTTGATTTGGAAGCAGGCCTAAGGTT CTTGGCTTCAGCCCCTTCTCACACGCTGAAGCACGACCACGTTAGGAAGTTCTTCAGTTCTTCATCTCCC TCCCAACAGCTCCAAAGTCCAAGTCCTGGCAACCCCTCCCTTCCTAAAGTGGGTGCCGTGATGGGTGTGT CTGGAAGGCCTGTGTGTGGCGTGGCTGGCATCCCATCCTCACAGAGCAGCGCCCAGCACCATCTGCAGCA CTCGGCTAGCACATCTGCCTCCCTGCCCCACTGCTCCCACACAGGGGGCACAGGCTCAGCGCTGGCATAC CGGACCCAAGTGGACAACTCGCCTACCATCCTTATGCCCTCCAGTCTGCAGACCCCTCAGCCCCAGGAGC AGAATGGGATTTTAGACTGGCTTAGGAAGCTGCGCTTGCACAAGTATTACCCTGTCTTTAAACAGCTCAC CATGGAGAAGTTCCTGAGCCTCACGGAAGAAGACCTGAATAAATTTGAGTCCCTCACCATGGGAGCAAAG AAGAAACTCAAGACTCAGCTGGAGCTCGAGAAGGAGAAGTCAGAGAGACGGTGCCTCAACTCCTCGGCCC CATCCTTGGTCACCAGCAGCGGAGTGGCTCGAGTCACCCCCACCAGCCACGTGGGGCCTGTGCAGCCTGG GCGTAGTAGCAGCCACGCTTCAGAGCTGCGGGTGGAGGTGGAGCCGCCGGCTCACCAGCTGCCCCGAGAG GGCAGCTCCTCCGAGTACTCCAGCTCCTCCTCCAGCCCCATGGGTGTGCAGGTTCGCGAGGAGAGCTCAG ACAGCGCCGAGGAGAGCGACAGACGTGTGGACATCCATGTCGAGGGGACTGAGAAGGAGAAGCCCGTGAT GCTGCTGGCTCACTTTCCGTCCAGCTCTGCGAGACCCACGGCCCAGGTTCTGCCTGTGCAGAACGAGACC GGCTCCAGCCCTGCCGCTCACCACCCTCTGCCCCCGCAGCTCATGCCTGCAGCCTCCCACCTGGCGCCTG TCCGCATGCTGAACTCCGTGCACAAGTCAGACAGGGGCGGAGCGGACGTGAAGCTCCTCTCGTCGTCTGT CCACTCCCTTCTGTCTCTGGAGGAAAGGAACAAGGGCCCTGGTCCTAGAAGTGGCACGAAGGTGGACAAG AGCTTTGGTGGTGCTGTGCTGGACCCACTGCCCTCGGCAGCACCCCATCCACCAGGGCAGGGCCTCTCGG GCCTTGTAGAGAACAACGCGGTGTCACCTACCGTCTCCTTTGGTCCCCGGGCCAAAGTTGTGCATGCAGC CACACTGGACAGGGTGCTGAAGACAGCACAGCAGCCAGCCTTGACTGTAGAGAGCAGCTCAGCTACCACA GGGACACCGAGCACCGTCCTGCATGTGGCCCGGCCACCCATCAAGCTGCTGCTGGCTTCCTCTGTGCCCG CGGATGCTGCCATCGCCGGGCAGACTTCTTGTCCCAACAACGGGCAGATCAGCGTGCCCCCTGCAATAAT GAACCCCCGGACTGCTCTGTACACAGCCAACACCAAAGTTGCCTTCTCTGCGGTGAGCAGTGTGCCTGTG GGCCCACTGCAGGGCAGCTTCTGCGCCAATAGCAACACTGCCTCCCCCAGCAGCCACCCCTCCACTTCTT TTGCGAGCATGGCCTCTCTACCCAGTTGCCCAGCCCCCAGCTCCAGTCCCGCCCTCTCTTCTGTCCCCGA AAGCAGCTTCTACAGTGGCGGTGCTGGCAGCAGCTCCCCAGGAAACATTCCTGCCTCAAGCCAGAGCCAC CACCATCACCACCACCATCAGCAGCCCCCCGCACCCCCCCAGCCTGCACCGCCCCCACCTGGCTGCATTG TCTGCACGTCCTGTGGGTGCAGTGGCAGCTGTGGCTCCAACGGCCTGACGGTCAGCTATGCCAACTACTT CCAGCACCCGTTCTCAGGGCCGTCCGTGCTCACCTTCCCTTTCTTGCCCTTCAGTCCCATGTGTGGCAAT GGCTATGTCAGTACCCAGCAGTATGGTGGTGGCTCTGCCTTTCCTGTGGTACACACACCCTACAATGGCA GCGTGACTCCAGACCCCGTCCTAGGTGGGCAGTCCACGTTTGCAGTGCCACCCATGCAGAACTTCATGGC TGGGACGGCGGGGGTGTACCAAGCCCAAGGCCTGGTGGGCAGCACCAATGGCTCCAGTCACAAAAAGAGT GGGAATCTGTCCTGTTACAACTGTGGGGCCACTGGCCACCGAGCCCAGGACTGCAAGCAGCCGTCCATGG ACTTCAACCGGCAAGGAACTTTTAGGTTGAAATACGCCCCTCCAGCAGAAAGTCTGGACTCCACGGACTG A
Translation (956 aa):
MASNHPAFSFHQKQVLRQELTQIQSSLNSGGGGGGGGGGGGKSAPGPSGALPTCSACHKMAPRTETPVSS ISNSLENALHTSAHSTEESLPKRPLGKHGKVSVEKIDLKGLSHTKNDRSVECSFEVLWSDSSITSVTKSS SEVTEFISKLSQLCPEENLDKLIPCLAGPDSFYVERNHVDLEAGLRFLASAPSHTLKHDHVRKFFSSSSP SQQLQSPSPGNPSLPKVGAVMGVSGRPVCGVAGIPSSQSSAQHHLQHSASTSASLPHCSHTGGTGSALAY RTQVDNSPTILMPSSLQTPQPQEQNGILDWLRKLRLHKYYPVFKQLTMEKFLSLTEEDLNKFESLTMGAK KKLKTQLELEKEKSERRCLNSSAPSLVTSSGVARVTPTSHVGPVQPGRSSSHASELRVEVEPPAHQLPRE GSSSEYSSSSSSPMGVQVREESSDSAEESDRRVDIHVEGTEKEKPVMLLAHFPSSSARPTAQVLPVQNET GSSPAAHHPLPPQLMPAASHLAPVRMLNSVHKSDRGGADVKLLSSSVHSLLSLEERNKGPGPRSGTKVDK SFGGAVLDPLPSAAPHPPGQGLSGLVENNAVSPTVSFGPRAKVVHAATLDRVLKTAQQPALTVESSSATT GTPSTVLHVARPPIKLLLASSVPADAAIAGQTSCPNNGQISVPPAIMNPRTALYTANTKVAFSAVSSVPV GPLQGSFCANSNTASPSSHPSTSFASMASLPSCPAPSSSPALSSVPESSFYSGGAGSSSPGNIPASSQSH HHHHHHQQPPAPPQPAPPPPGCIVCTSCGCSGSCGSNGLTVSYANYFQHPFSGPSVLTFPFLPFSPMCGN GYVSTQQYGGGSAFPVVHTPYNGSVTPDPVLGGQSTFAVPPMQNFMAGTAGVYQAQGLVGSTNGSSHKKS GNLSCYNCGATGHRAQDCKQPSMDFNRQGTFRLKYAPPAESLDSTD

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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