NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS22426.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22426.1 Public Mus musculus 8 Tmem184c 23 108 98 CCDS HistoryNCBI Gene:234463Re-query CCDS DB by CCDS ID:22426.1Re-query CCDS DB by GeneID:234463See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22426.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034030.14 ENSMUSP00000034030.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034030.14Link to Ensembl Protein Viewer:ENSMUSP00000034030.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000034030Re-query CCDS DB by Protein ID:ENSMUSP00000034030
Original member Current member NCBI NM_145599.4 NP_663574.3 Accepted alive Link to Nucleotide Sequence:NM_145599.4Link to Protein Sequence:NP_663574.3Re-query CCDS DB by Nucleotide ID:NM_145599Re-query CCDS DB by Protein ID:NP_663574Link to BLAST:NP_663574.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663574.3 622 Q3TPR7-2 622 100% 0 0

Chromosomal Locations for CCDS 22426.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 77596363 77597180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 77597809 77597980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 77598554 77598653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 77599657 77599769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 77601415 77601508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 77602858 77602932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 77604622 77604827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 77606164 77606200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 77606287 77606417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 77610103 77610225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1869 nt):
ATGCCTTGCGCATGTAATCGGAGTAACTGGAGGAGATGGATCCGACCCCTGTTGGTACTTTTTTACGCAA
CAACCATCCTGGTCGCGGTTCCGATATGCATTTGGAAGTTTCAAAAAATGAAGGTTGGAATGCACACGAA
ATCCTGGTTTATAGCTGGAATATTTCTGCTGCTAACCATACCCGTGTCATTGTGGGGAATCCTTCAACAT
CTGGTACATTACACTCAACCTGAACTTCAAAAGCCCATAATAAGGATCCTATGGATGGTCCCAATATACA
GTGTGGATAGTTGGGTGGCCTTGGTATATCCCAAAATTGCAATATACGTGGATACCTGGAGGGAGTGTTA
CGAAGCTTACGTCATCTATAACTTTATGATCTTTCTTACCAACTATCTGACAATCCGATTCCCAAACTTG
ATATTACACCTCGAAGCGAAAGATCAACAAAACCACATCCTTCCGTTATGCTGCTGTCCACCGTGGGCGA
TGGGAGAAATGCTACTCTTTCGTTGCAAGCTAGGAGTGCTGCAATATACCGTGGTCAGACCGATCACCAC
CGTCACTGCACTCGTATGTGAAATCCTTGATGTATATGATGAAGGAAACTTTGGTTTCAGCAATGCTTGG
ACATACCTCGTTATACTAAATAATTTGTCACAATTGTTTGCCATGTACTGCCTGCTGCTGTTTTACAAAG
TCCTAAAGGAAGAGCTTAGCCCTATACAACCTGTTGGCAAGTTCCTCTGCGTAAAACTCGTGGTTTTCGT
TTCTTTTTGGCAAGCGGTACTTATTGCTTTGTTGGTTAAACTGGGCGTTATTTCAGAAAAGCGTACCTGG
GAATGGCAAAGTGCAGAAGCTGTGGCCACGGGCCTGCAGGATTTCATAATCTGCATTGAAATGTTCTTTG
CGGCAATTGCCCACCACTATACGTTCTCCTATAAACCCTATGTGCATGAAGCAGAGGAAGGCTCCTGCTT
TGACTCGTTTCTTGCAATGTGGGATGTGTCCGATATCAGAGATGATATTTCTGAACAAGTAAGGCGTGTC
GGGAGGACAATGAGAGGTTATCCAAAAAAGAAATGTTTTCCTGGAGATCCAGATCATAATGAGCACTCGA
GCCTACTTTCTTCTTCTTCACAAGATCTAACTTCTGGTTCTTCAAAGGTACCCTCCCCAGGGGGCCTGTA
CCAAGGTTTTGGACACACTATTTCTTCACAGAGCCCAATTTCTATAGCCAGCATATATGAAGAGATCATG
AATGACATCCCAGAAGAGCAACAGAAGCTTCTCAATCCCGGACAAGACGTCACGATCAACATCCCAGAAG
AGCAACAAAAACTTAACACAGGCAAGGATGTCATGCTTGACAGACAGACCATTACTTCACCGAGACCAAT
TTCTATAGCCAGCATATATGAAAAGATCATGATTGACATCCCAGAAGAGCAACAAAAACTTACTGACACA
GGCCAAGATGTCATGATTAACAGACAGACCATTACTCCACCGAGACCAATTTCTATAACCAGCATATATG
AAGAGGTCTTAATTGACATCACAGAAAAGCAACAAAAACTTAATGATACAGGCAAAAATGTCATGATTAA
CATCCCAGAAGAGCAACAAAAACTTATTGACAAACGCAAAGATGTCATGATTGACATCCCAGAACAGAAC
GCAATTCCTGATAATAGCCAATATCAAGACCAGGAACAAATAGTTACTTTACAGGCTTTATTTCCTTCAA
CAGAAACATCTGAAAATAGCATGATTGACACCTCGGAATCACAGCAGGAGTCTTCTGATTTATGTACCGA
ATCTTCTGATTCATCTACCGAGTCTTCTGACCTATCTACGGACCCTTAA

Translation (622 aa):
MPCACNRSNWRRWIRPLLVLFYATTILVAVPICIWKFQKMKVGMHTKSWFIAGIFLLLTIPVSLWGILQH
LVHYTQPELQKPIIRILWMVPIYSVDSWVALVYPKIAIYVDTWRECYEAYVIYNFMIFLTNYLTIRFPNL
ILHLEAKDQQNHILPLCCCPPWAMGEMLLFRCKLGVLQYTVVRPITTVTALVCEILDVYDEGNFGFSNAW
TYLVILNNLSQLFAMYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQAVLIALLVKLGVISEKRTW
EWQSAEAVATGLQDFIICIEMFFAAIAHHYTFSYKPYVHEAEEGSCFDSFLAMWDVSDIRDDISEQVRRV
GRTMRGYPKKKCFPGDPDHNEHSSLLSSSSQDLTSGSSKVPSPGGLYQGFGHTISSQSPISIASIYEEIM
NDIPEEQQKLLNPGQDVTINIPEEQQKLNTGKDVMLDRQTITSPRPISIASIYEKIMIDIPEEQQKLTDT
GQDVMINRQTITPPRPISITSIYEEVLIDITEKQQKLNDTGKNVMINIPEEQQKLIDKRKDVMIDIPEQN
AIPDNSQYQDQEQIVTLQALFPSTETSENSMIDTSESQQESSDLCTESSDSSTESSDLSTDP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH