NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
The CCDS database will be unavailable on Thursday, April 25, 2024, starting at 7:00 a.m. EDT for up to 120 minutes.
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS21355.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21355.1 Public Mus musculus 7 Igf1r 23 108 98 CCDS HistoryNCBI Gene:16001Re-query CCDS DB by CCDS ID:21355.1Re-query CCDS DB by GeneID:16001See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21355.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000005671.9 ENSMUSP00000005671.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000005671.9Link to Ensembl Protein Viewer:ENSMUSP00000005671.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000005671Re-query CCDS DB by Protein ID:ENSMUSP00000005671
Original member NCBI NM_010513.2 NP_034643.2 Updated not alive Link to Nucleotide Sequence:NM_010513.2Link to Protein Sequence:NP_034643.2Re-query CCDS DB by Nucleotide ID:NM_010513Re-query CCDS DB by Protein ID:NP_034643
Current member NCBI NM_010513.3 NP_034643.2 Accepted alive Link to Nucleotide Sequence:NM_010513.3Link to Protein Sequence:NP_034643.2Re-query CCDS DB by Nucleotide ID:NM_010513Re-query CCDS DB by Protein ID:NP_034643Link to BLAST:NP_034643.2

Chromosomal Locations for CCDS 21355.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 67952859 67952952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68003810 68004355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68164993 68165305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68169897 68170048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68173231 68173375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68183344 68183558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68184731 68184857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68186990 68187228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68189573 68189740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68189946 68190150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68193347 68193630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68194969 68195105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68195590 68195749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68201244 68201346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68201902 68201972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68207251 68207480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68207763 68207873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68211994 68212156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68214919 68215048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68218402 68218536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68226020 68226401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4110 nt):
ATGAAGTCTGGCTCCGGAGGAGGGTCCCCGACCTCGCTGTGGGGGCTCGTGTTTCTCTCCGCCGCGCTCT
CTCTCTGGCCGACGAGTGGAGAAATCTGTGGGCCCGGCATTGACATCCGCAACGACTATCAGCAGCTGAA
GCGCCTGGAAAACTGCACGGTGATCGAGGGCTTCCTCCACATCCTGCTCATCTCCAAGGCCGAGGACTAC
CGAAGCTACCGCTTCCCCAAGCTCACCGTCATCACTGAGTACTTGCTGCTCTTCCGAGTCGCTGGCCTCG
AGAGCCTGGGAGACCTCTTCCCCAACCTCACAGTCATCCGTGGCTGGAAACTCTTCTACAACTACGCACT
GGTCATCTTCGAGATGACCAATCTCAAGGATATTGGGCTTTATAATCTGAGGAACATTACTCGGGGGGCC
ATCAGGATTGAGAAGAACGCCGACCTCTGTTACCTCTCCACCATAGACTGGTCTCTCATCTTGGATGCGG
TGTCCAATAACTACATTGTGGGGAACAAGCCCCCGAAGGAATGTGGGGACCTGTGTCCAGGGACATTGGA
GGAGAAGCCCATGTGTGAGAAGACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAAATCGC
TGCCAGAAAATGTGCCCAAGTGTGTGCGGGAAGCGAGCCTGCACCGAGAACAACGAGTGCTGCCACCCGG
AGTGCCTGGGCAGCTGCCACACACCGGACGACAACACAACCTGCGTGGCCTGCAGACACTACTACTACAA
AGGCGTGTGTGTGCCTGCCTGCCCGCCTGGCACCTACAGGTTCGAGGGCTGGCGCTGTGTGGATCGCGAT
TTCTGCGCCAACATCCCCAACGCTGAGAGCAGTGACTCGGATGGCTTCGTTATCCACGACGATGAGTGCA
TGCAGGAGTGTCCCTCAGGCTTCATCCGCAACAGCACCCAGAGCATGTACTGTATCCCCTGCGAAGGCCC
CTGCCCCAAAGTCTGCGGCGATGAAGAGAAGAAAACGAAAACCATCGATTCGGTGACTTCTGCTCAAATG
CTCCAAGGATGCACCATCCTGAAGGGCAATCTGCTTATTAACATCCGGAGAGGCAATAACATTGCCTCGG
AGTTGGAGAACTTCATGGGGCTCATCGAGGTGGTGACCGGCTACGTGAAGATCCGCCATTCTCATGCCTT
GGTCTCCTTGTCCTTCCTGAAGAACCTTCGTCTCATCTTAGGAGAGGAGCAGCTGGAAGGGAACTACTCC
TTCTATGTCCTAGACAACCAGAACTTGCAGCAGCTGTGGGACTGGAACCACCGGAACCTGACCGTCAGGT
CCGGAAAGATGTACTTTGCTTTCAATCCCAAGCTGTGTGTCTCCGAAATTTACCGCATGGAGGAAGTGAC
CGGAACCAAGGGACGCCAGAGCAAAGGGGACATAAACACCAGGAACAACGGAGAGCGAGCTTCCTGTGAA
AGTGATGTTCTCCGTTTCACCTCCACCACGACCTGGAAGAACCGAATCATCATAACGTGGCACCGGTACC
GGCCGCCGGACTACCGGGATCTCATCAGCTTCACAGTTTACTACAAGGAGGCACCATTTAAAAACGTTAC
GGAATATGACGGGCAGGATGCCTGTGGCTCCAACAGCTGGAACATGGTGGATGTAGACCTGCCTCCGAAC
AAGGAGGGCGAGCCTGGCATTTTACTGCATGGGCTGAAGCCCTGGACCCAGTATGCTGTCTATGTCAAGG
CTGTGACCCTCACCATGGTGGAAAACGACCATATCCGTGGGGCCAAAAGTGAAATCTTGTACATTCGCAC
CAATGCTTCAGTCCCTTCCATTCCCCTAGATGTCCTCTCAGCATCAAACTCTTCCTCTCAGCTGATTGTG
AAGTGGAATCCTCCAACTCTGCCCAATGGTAACTTGAGTTACTACATTGTGAGGTGGCAGCGGCAGCCCC
AGGATGGTTACCTGTACCGGCACAACTACTGCTCCAAAGACAAAATACCCATCAGAAAGTACGCCGATGG
TACCATCGACGTGGAGGAGGTGACGGAAAATCCCAAGACAGAAGTGTGTGGTGGTGATAAAGGGCCATGC
TGCGCTTGCCCTAAAACTGAAGCTGAGAAGCAGGCTGAGAAGGAGGAGGCTGAGTACCGTAAAGTCTTTG
AGAATTTCCTTCACAATTCCATCTTTGTGCCCAGGCCCGAAAGGAGGCGGAGAGACGTCATGCAAGTGGC
CAACACGACCATGTCCAGCCGAAGCAGGAACACCACGGTAGCTGACACCTACAATATCACAGACCCGGAG
GAGTTCGAGACAGAGTACCCTTTCTTTGAGAGCAGAGTGGATAACAAGGAGAGGACTGTCATCTCCAACC
TCCGGCCTTTCACTCTGTACCGCATCGATATCCACAGCTGCAACCACGAGGCTGAGAAGCTGGGCTGCAG
CGCCTCCAACTTCGTCTTTGCGAGAACCATGCCAGCAGAAGGAGCAGATGATATCCCTGGTCCGGTGACC
TGGGAGCCAAGACCCGAAAACTCCATCTTTTTAAAGTGGCCAGAACCCGAGAACCCCAACGGATTGATCC
TAATGTATGAAATTAAATACGGGTCGCAAGTCGAGGATCAGCGGGAATGTGTGTCCAGACAGGAGTACAG
GAAGTACGGAGGGGCCAAACTCAACCGTCTAAACCCAGGGAACTATACAGCCCGGATTCAGGCTACCTCC
CTCTCTGGGAATGGGTCATGGACAGATCCTGTGTTCTTCTATGTCCCCGCCAAAACGACGTATGAGAACT
TCATGCATCTGATCATTGCTCTGCCGGTTGCCATCCTGCTGATCGTTGGGGGGCTGGTTATCATGCTGTA
TGTCTTCCATAGAAAGAGAAATAACAGCAGGTTGGGCAATGGAGTGCTGTATGCTTCTGTGAACCCCGAG
TATTTCAGCGCAGCTGATGTGTACGTGCCTGATGAATGGGAGGTAGCTCGAGAGAAGATCACCATGAACC
GGGAGCTCGGACAAGGGTCCTTTGGGATGGTCTATGAAGGAGTGGCCAAGGGTGTGGTCAAGGATGAACC
CGAAACCAGAGTGGCCATCAAGACGGTAAACGAGGCTGCAAGTATGCGTGAAAGAATCGAGTTTCTCAAC
GAGGCCTCGGTGATGAAGGAGTTCAATTGTCACCATGTGGTCCGGTTGCTGGGTGTGGTATCCCAAGGCC
AGCCCACCCTGGTCATCATGGAACTAATGACACGCGGTGATCTCAAAAGTTATCTCCGGTCTCTGAGGCC
AGAAGTGGAGCAGAATAATCTAGTCCTCATTCCTCCGAGCTTAAGCAAGATGATCCAGATGGCTGGAGAG
ATTGCAGATGGCATGGCCTACCTCAATGCCAACAAGTTCGTCCACAGAGACCTTGCTGCTAGGAACTGCA
TGGTAGCCGAAGATTTCACAGTCAAAATTGGAGATTTCGGTATGACACGAGACATCTACGAGACGGACTA
CTACCGGAAAGGCGGGAAGGGGTTGCTGCCTGTGCGCTGGATGTCTCCCGAGTCCCTCAAGGATGGTGTC
TTCACTACTCATTCTGATGTCTGGTCCTTCGGGGTCGTCCTCTGGGAGATCGCCACGCTGGCTGAGCAGC
CCTACCAGGGCTTGTCCAACGAGCAAGTTCTTCGTTTCGTCATGGAGGGTGGCCTTCTGGACAAGCCGGA
CAACTGCCCTGATATGCTGTTTGAACTTATGCGCATGTGCTGGCAGTATAACCCCAAGATGCGGCCCTCC
TTCCTGGAGATCATCGGCAGCATCAAGGATGAGATGGAGCCCAGCTTCCAGGAGGTCTCCTTCTACTACA
GCGAGGAGAACAAGCCTCCCGAGCCAGAGGAGCTGGAGATGGAGCCTGAGAACATGGAGAGCGTCCCACT
GGACCCTTCGGCCTCCTCAGCCTCCCTGCCTCTGCCTGAAAGACACTCAGGACACAAGGCTGAGAATGGC
CCGGGCCCTGGCGTGCTCGTTCTCCGCGCCAGTTTTGATGAGAGACAGCCTTACGCTCACATGAACGGGG
GACGCGCCAACGAGAGGGCCTTGCCTCTGCCCCAGTCCTCGACCTGCTGA

Translation (1369 aa):
MKSGSGGGSPTSLWGLVFLSAALSLWPTSGEICGPGIDIRNDYQQLKRLENCTVIEGFLHILLISKAEDY
RSYRFPKLTVITEYLLLFRVAGLESLGDLFPNLTVIRGWKLFYNYALVIFEMTNLKDIGLYNLRNITRGA
IRIEKNADLCYLSTIDWSLILDAVSNNYIVGNKPPKECGDLCPGTLEEKPMCEKTTINNEYNYRCWTTNR
CQKMCPSVCGKRACTENNECCHPECLGSCHTPDDNTTCVACRHYYYKGVCVPACPPGTYRFEGWRCVDRD
FCANIPNAESSDSDGFVIHDDECMQECPSGFIRNSTQSMYCIPCEGPCPKVCGDEEKKTKTIDSVTSAQM
LQGCTILKGNLLINIRRGNNIASELENFMGLIEVVTGYVKIRHSHALVSLSFLKNLRLILGEEQLEGNYS
FYVLDNQNLQQLWDWNHRNLTVRSGKMYFAFNPKLCVSEIYRMEEVTGTKGRQSKGDINTRNNGERASCE
SDVLRFTSTTTWKNRIIITWHRYRPPDYRDLISFTVYYKEAPFKNVTEYDGQDACGSNSWNMVDVDLPPN
KEGEPGILLHGLKPWTQYAVYVKAVTLTMVENDHIRGAKSEILYIRTNASVPSIPLDVLSASNSSSQLIV
KWNPPTLPNGNLSYYIVRWQRQPQDGYLYRHNYCSKDKIPIRKYADGTIDVEEVTENPKTEVCGGDKGPC
CACPKTEAEKQAEKEEAEYRKVFENFLHNSIFVPRPERRRRDVMQVANTTMSSRSRNTTVADTYNITDPE
EFETEYPFFESRVDNKERTVISNLRPFTLYRIDIHSCNHEAEKLGCSASNFVFARTMPAEGADDIPGPVT
WEPRPENSIFLKWPEPENPNGLILMYEIKYGSQVEDQRECVSRQEYRKYGGAKLNRLNPGNYTARIQATS
LSGNGSWTDPVFFYVPAKTTYENFMHLIIALPVAILLIVGGLVIMLYVFHRKRNNSRLGNGVLYASVNPE
YFSAADVYVPDEWEVAREKITMNRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN
EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEVEQNNLVLIPPSLSKMIQMAGE
IADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV
FTTHSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPS
FLEIIGSIKDEMEPSFQEVSFYYSEENKPPEPEELEMEPENMESVPLDPSASSASLPLPERHSGHKAENG
PGPGVLVLRASFDERQPYAHMNGGRANERALPLPQSSTC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH