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Pr012810751

Eukaryota (4 taxa) STS probe D7S1874 for glutamate receptor, metabotropic 8 (GRM8) and 3 more genes

Synopsis

Field NameValues
NameD7S1874
AliasesA125WH1; AFMA125WH1; AFMa125wh1; HSA125WH1; RH31763; SHGC-22051; W5443
TypeSTS
Application
Source organism
Source sequence
Target organismsNomascus leucogenys; Pan troglodytes; Pongo abelii; Homo sapiens
Target genesGRM8 (Pongo abelii); GRM8 (Nomascus leucogenys); GRM8 (Homo sapiens); GRM8 (Pan troglodytes)

Sequences

>Probe|12810751|PRIMERF Forward PCR primer (outermost) (19b)
TCACCTTGAGATTCCATCC
>Probe|12810751|PRIMERR Reverse PCR primer (outermost) (20b)
AACACCGTGGTCTTATCAAA

References

1.

A physical map of human chromosome 7: an integrated YAC contig map with average STS spacing of 79 kb.

Bouffard GG, Idol JR, Braden VV, Iyer LM, Cunningham AF, Weintraub LA, Touchman JW, Mohr-Tidwell RM, Peluso DC, Fulton RS, Ueltzen MS, Weissenbach J, Magness CL, Green ED.

Genome Res. 1997 Jul;7(7):673-92.

2.

An STS-based radiation hybrid map of the human genome.

Stewart EA, McKusick KB, Aggarwal A, Bajorek E, Brady S, Chu A, Fang N, Hadley D, Harris M, Hussain S, Lee R, Maratukulam A, O'Connor K, Perkins S, Piercy M, Qin F, Reif T, Sanders C, She X, Sun WL, Tabar P, Voyticky S, Cowles S, Fan JB, Mader C, Quackenbush J, Myers RM, Cox DR.

Genome Res. 1997 May;7(5):422-33.

Show All 6 References...

3.

Comprehensive human genetic maps: individual and sex-specific variation in recombination.

Broman KW, Murray JC, Sheffield VC, White RL, Weber JL.

Am J Hum Genet. 1998 Sep;63(3):861-9.

4.

A high-resolution recombination map of the human genome.

Kong A, Gudbjartsson DF, Sainz J, Jonsdottir GM, Gudjonsson SA, Richardsson B, Sigurdardottir S, Barnard J, Hallbeck B, Masson G, Shlien A, Palsson ST, Frigge ML, Thorgeirsson TE, Gulcher JR, Stefansson K.

Nat Genet. 2002 Jul;31(3):241-7. Epub 2002 Jun 10.

5.

A comprehensive genetic map of the human genome based on 5,264 microsatellites.

Dib C, Fauré S, Fizames C, Samson D, Drouot N, Vignal A, Millasseau P, Marc S, Hazan J, Seboun E, Lathrop M, Gyapay G, Morissette J, Weissenbach J.

Nature. 1996 Mar 14;380(6570):152-4.

6.

A fast and scalable radiation hybrid map construction and integration strategy.

Agarwala R, Applegate DL, Maglott D, Schuler GD, Schäffer AA.

Genome Res. 2000 Mar;10(3):350-64.

Genetic maps for probe

OrganismMap TypeMap NameChromosomePositionMarker NameStatus
Homo sapiensradiation hybridStanford-G376293 cr10000SHGC-22051
Homo sapiensradiation hybridGeneMap99-G376293 cr10000AFMa125wh1
Homo sapienslinkageRutgers Map7 cmD7S1874
Homo sapienslinkageMarshfield7129.58 cmAFMa125wh1
Homo sapienslinkagedeCODE7128.63 cmD7S1874
Homo sapienslinkageGenethon7130.2 cmAFMa125wh1
Homo sapiensradiation hybridNCBI RH71157.7 crAFMa125wh1

Computational maps for probe

Analysis is pending.

Additional Data

Field NameValues
UniSTS IDcontext specific help for: UniSTS ID64618
Probe Cross-refcontext specific help for: Probe Cross-refGDB:437256
Download UniSTS epcr legacy dataDownload NCBI UniSTS data

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