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Pr012745282

Eukaryota (3 taxa) STS probe D16S3085 for CCCTC-binding factor (zinc finger protein) (CTCF) and 2 more genes

Synopsis

Field NameValues
NameD16S3085
AliasesAFMB082YC5; AFMb082yc5; B082YC5; HSB082YC5; W6360
TypeSTS
Application
Source organism
Source sequence
Target organismsPan troglodytes; Pongo abelii; Homo sapiens
Target genesCTCF (Pongo abelii); CTCF (Homo sapiens); CTCF (Pan troglodytes)

Sequences

>Probe|12745282|PRIMERF Forward PCR primer (outermost) (17b)
GCTATGACCGCACCAGT
>Probe|12745282|PRIMERR Reverse PCR primer (outermost) (16b)
CGGAAATGGACCCTTG

References

1.

Comprehensive human genetic maps: individual and sex-specific variation in recombination.

Broman KW, Murray JC, Sheffield VC, White RL, Weber JL.

Am J Hum Genet. 1998 Sep;63(3):861-9.

2.

A high-resolution recombination map of the human genome.

Kong A, Gudbjartsson DF, Sainz J, Jonsdottir GM, Gudjonsson SA, Richardsson B, Sigurdardottir S, Barnard J, Hallbeck B, Masson G, Shlien A, Palsson ST, Frigge ML, Thorgeirsson TE, Gulcher JR, Stefansson K.

Nat Genet. 2002 Jul;31(3):241-7. Epub 2002 Jun 10.

Show All 3 References...

3.

A comprehensive genetic map of the human genome based on 5,264 microsatellites.

Dib C, Fauré S, Fizames C, Samson D, Drouot N, Vignal A, Millasseau P, Marc S, Hazan J, Seboun E, Lathrop M, Gyapay G, Morissette J, Weissenbach J.

Nature. 1996 Mar 14;380(6570):152-4.

Genetic maps for probe

OrganismMap TypeMap NameChromosomePositionMarker NameStatus
Homo sapienslinkageRutgers Map16 cmD16S3085
Homo sapienslinkageMarshfield1685.94 cmAFMb082yc5
Homo sapienslinkagedeCODE1684.83 cmD16S3085
Homo sapienslinkageGenethon1684.4 cmAFMb082yc5

Computational maps for probe

Analysis is pending.

Additional Data

Field NameValues
UniSTS IDcontext specific help for: UniSTS ID49742
Probe Cross-refcontext specific help for: Probe Cross-refGDB:609990
Download UniSTS epcr legacy dataDownload NCBI UniSTS data

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