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Pr012491548

Eukaryota (4 taxa) STS probe D2S2237 for par-3 family cell polarity regulator beta (PARD3B) and 3 more genes

Synopsis

Field NameValues
NameD2S2237
Aliases199YF2; AFM199yf2; HS199YF2; RH15197; RH30779; SHGC-20060; W2390
TypeSTS
Application
Source organism
Source sequence
Target organismsNomascus leucogenys; Pan troglodytes; Pongo abelii; Homo sapiens
Target genesLOC100452416 (Pongo abelii); PARD3B (Nomascus leucogenys); PARD3B (Homo sapiens); PARD3B (Pan troglodytes)
UniSTS IDUniSTS:25494

Sequences

>Probe|12491548|PRIMERF Forward PCR primer (outermost) (20b)
CAGAATGCCTGTCCTGTCCA
>Probe|12491548|PRIMERR Reverse PCR primer (outermost) (20b)
GGCAAGTTGGCTACCTGACC

References

1.

A physical map of human chromosome 7: an integrated YAC contig map with average STS spacing of 79 kb.

Bouffard GG, Idol JR, Braden VV, Iyer LM, Cunningham AF, Weintraub LA, Touchman JW, Mohr-Tidwell RM, Peluso DC, Fulton RS, Ueltzen MS, Weissenbach J, Magness CL, Green ED.

Genome Res. 1997 Jul;7(7):673-92.

2.

An STS-based radiation hybrid map of the human genome.

Stewart EA, McKusick KB, Aggarwal A, Bajorek E, Brady S, Chu A, Fang N, Hadley D, Harris M, Hussain S, Lee R, Maratukulam A, O'Connor K, Perkins S, Piercy M, Qin F, Reif T, Sanders C, She X, Sun WL, Tabar P, Voyticky S, Cowles S, Fan JB, Mader C, Quackenbush J, Myers RM, Cox DR.

Genome Res. 1997 May;7(5):422-33.

Show All 6 References...

3.

Comprehensive human genetic maps: individual and sex-specific variation in recombination.

Broman KW, Murray JC, Sheffield VC, White RL, Weber JL.

Am J Hum Genet. 1998 Sep;63(3):861-9.

4.

A high-resolution recombination map of the human genome.

Kong A, Gudbjartsson DF, Sainz J, Jonsdottir GM, Gudjonsson SA, Richardsson B, Sigurdardottir S, Barnard J, Hallbeck B, Masson G, Shlien A, Palsson ST, Frigge ML, Thorgeirsson TE, Gulcher JR, Stefansson K.

Nat Genet. 2002 Jul;31(3):241-7. Epub 2002 Jun 10.

5.

A comprehensive genetic map of the human genome based on 5,264 microsatellites.

Dib C, Fauré S, Fizames C, Samson D, Drouot N, Vignal A, Millasseau P, Marc S, Hazan J, Seboun E, Lathrop M, Gyapay G, Morissette J, Weissenbach J.

Nature. 1996 Mar 14;380(6570):152-4.

6.

A fast and scalable radiation hybrid map construction and integration strategy.

Agarwala R, Applegate DL, Maglott D, Schuler GD, Schäffer AA.

Genome Res. 2000 Mar;10(3):350-64.

Genetic maps for probe

OrganismMap TypeMap NameChromosomePositionMarker NameStatus
Homo sapiensradiation hybridStanford-G328104 cr10000SHGC-20060
Homo sapiensradiation hybridGeneMap99-G328943 cr10000AFM199yf2
Homo sapienslinkageRutgers Map2 cmD2S2237
Homo sapienslinkageMarshfield2200.43 cmAFM199yf2
Homo sapienslinkagedeCODE2202.01 cmD2S2237
Homo sapienslinkageGenethon2206.4 cmAFM199yf2
Homo sapiensradiation hybridNCBI RH21529.6 crAFM199yf2

Computational maps for probe

Analysis is pending.

Additional Data

Field NameValues
UniSTS IDcontext specific help for: UniSTS ID25494
Probe Cross-refcontext specific help for: Probe Cross-refGDB:602513; GDB:608961
Download UniSTS epcr legacy dataDownload NCBI UniSTS data

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