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Pr012490171

Eukaryota (7 taxa) STS probe SHGC-77488 for pentraxin 3, long (PTX3) and 11 more genes

Synopsis

Field NameValues
NameSHGC-77488
AliasesRH105359; RH70859; X63613
TypeSTS
Application
Source organism
Source sequence
Target organismsNomascus leucogenys; Macaca mulatta; Pan troglodytes; Pongo abelii; Homo sapiens; Ailuropoda melanoleuca; Equus caballus
Target genesLOC100050222 (Equus caballus); VEPH1 (Equus caballus); PTX3 (Pongo abelii); LOC100474382 (Ailuropoda melanoleuca); VEPH1 (Nomascus leucogenys); PTX3 (Nomascus leucogenys); PTX3 (Pan troglodytes); VEPH1 (Pan troglodytes); PTX3 (Homo sapiens); VEPH1 (Macaca mulatta); PTX3 (Macaca mulatta); VEPH1 (Homo sapiens)

Sequences

>Probe|12490171|PRIMERF Forward PCR primer (outermost) (17b)
AACACATGCCAGTTGGG
>Probe|12490171|PRIMERR Reverse PCR primer (outermost) (24b)
GAGTTTATCTGACAGAGACACAGC

References

1.

A high-resolution radiation hybrid map of the human genome draft sequence.

Olivier M, Aggarwal A, Allen J, Almendras AA, Bajorek ES, Beasley EM, Brady SD, Bushard JM, Bustos VI, Chu A, Chung TR, De Witte A, Denys ME, Dominguez R, Fang NY, Foster BD, Freudenberg RW, Hadley D, Hamilton LR, Jeffrey TJ, Kelly L, Lazzeroni L, Levy MR, Lewis SC, Liu X, Lopez FJ, Louie B, Marquis JP, Martinez RA, Matsuura MK, Misherghi NS, Norton JA, Olshen A, Perkins SM, Perou AJ, Piercy C, Piercy M, Qin F, Reif T, Sheppard K, Shokoohi V, Smick GA, Sun WL, Stewart EA, Fernando J, Tejeda, Tran NM, Trejo T, Vo NT, Yan SC, Zierten DL, Zhao S, Sachidanandam R, Trask BJ, Myers RM, Cox DR.

Science. 2001 Feb 16;291(5507):1298-302.

2.

A physical map of 30,000 human genes.

Deloukas P, Schuler GD, Gyapay G, Beasley EM, Soderlund C, Rodriguez-Tomé P, Hui L, Matise TC, McKusick KB, Beckmann JS, Bentolila S, Bihoreau M, Birren BB, Browne J, Butler A, Castle AB, Chiannilkulchai N, Clee C, Day PJ, Dehejia A, Dibling T, Drouot N, Duprat S, Fizames C, Fox S, Gelling S, Green L, Harrison P, Hocking R, Holloway E, Hunt S, Keil S, Lijnzaad P, Louis-Dit-Sully C, Ma J, Mendis A, Miller J, Morissette J, Muselet D, Nusbaum HC, Peck A, Rozen S, Simon D, Slonim DK, Staples R, Stein LD, Stewart EA, Suchard MA, Thangarajah T, Vega-Czarny N, Webber C, Wu X, Hudson J, Auffray C, Nomura N, Sikela JM, Polymeropoulos MH, James MR, Lander ES, Hudson TJ, Myers RM, Cox DR, Weissenbach J, Boguski MS, Bentley DR.

Science. 1998 Oct 23;282(5389):744-6.

Genetic maps for probe

OrganismMap TypeMap NameChromosomePositionMarker NameStatus
Homo sapiensradiation hybridTNG388665 cr50000SHGC-77488
Homo sapiensradiation hybridGeneMap99-GB43581.44 cr3000X63613
Homo sapienslinkageRutgers Map3 cmSHGC-77488

Computational maps for probe

Analysis is pending.

Additional Data

Field NameValues
UniSTS IDcontext specific help for: UniSTS ID2537
Download UniSTS epcr legacy dataDownload NCBI UniSTS data

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