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Pr012397036

Homo sapiens STS probe D11S951E for metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) (MALAT1)

Synopsis

Field NameValues
NameD11S951E
AliasesEST00218; RH8163; SHGC-1364
TypeSTS
Application
Source organism
Source sequence
Target organismHomo sapiens
Target geneMALAT1 (Homo sapiens)

Sequences

>Probe|12397036|PRIMERF Forward PCR primer (outermost) (24b)
AGTGGACAAAATGAGGAAAACAGG
>Probe|12397036|PRIMERR Reverse PCR primer (outermost) (23b)
CCAACACAGTTTGCTCACATGCC

References

1.

A physical map of human chromosome 7: an integrated YAC contig map with average STS spacing of 79 kb.

Bouffard GG, Idol JR, Braden VV, Iyer LM, Cunningham AF, Weintraub LA, Touchman JW, Mohr-Tidwell RM, Peluso DC, Fulton RS, Ueltzen MS, Weissenbach J, Magness CL, Green ED.

Genome Res. 1997 Jul;7(7):673-92.

2.

An STS-based radiation hybrid map of the human genome.

Stewart EA, McKusick KB, Aggarwal A, Bajorek E, Brady S, Chu A, Fang N, Hadley D, Harris M, Hussain S, Lee R, Maratukulam A, O'Connor K, Perkins S, Piercy M, Qin F, Reif T, Sanders C, She X, Sun WL, Tabar P, Voyticky S, Cowles S, Fan JB, Mader C, Quackenbush J, Myers RM, Cox DR.

Genome Res. 1997 May;7(5):422-33.

Show All 4 References...

3.

A high-resolution radiation hybrid map of the human genome draft sequence.

Olivier M, Aggarwal A, Allen J, Almendras AA, Bajorek ES, Beasley EM, Brady SD, Bushard JM, Bustos VI, Chu A, Chung TR, De Witte A, Denys ME, Dominguez R, Fang NY, Foster BD, Freudenberg RW, Hadley D, Hamilton LR, Jeffrey TJ, Kelly L, Lazzeroni L, Levy MR, Lewis SC, Liu X, Lopez FJ, Louie B, Marquis JP, Martinez RA, Matsuura MK, Misherghi NS, Norton JA, Olshen A, Perkins SM, Perou AJ, Piercy C, Piercy M, Qin F, Reif T, Sheppard K, Shokoohi V, Smick GA, Sun WL, Stewart EA, Fernando J, Tejeda, Tran NM, Trejo T, Vo NT, Yan SC, Zierten DL, Zhao S, Sachidanandam R, Trask BJ, Myers RM, Cox DR.

Science. 2001 Feb 16;291(5507):1298-302.

4.

A fast and scalable radiation hybrid map construction and integration strategy.

Agarwala R, Applegate DL, Maglott D, Schuler GD, Schäffer AA.

Genome Res. 2000 Mar;10(3):350-64.

Genetic maps for probe

OrganismMap TypeMap NameChromosomePositionMarker NameStatus
Homo sapiensradiation hybridStanford-G3112877 cr10000SHGC-1364
Homo sapiensradiation hybridGeneMap99-G3112877 cr10000SHGC-1364
Homo sapiensradiation hybridTNG1128956 cr50000SHGC-1364
Homo sapienslinkageRutgers Map11 cmD11S951E
Homo sapiensradiation hybridNCBI RH11573.2 crSHGC-1364

Computational maps for probe

Analysis is pending.

Additional Data

Field NameValues
UniSTS IDcontext specific help for: UniSTS ID16497
Download UniSTS epcr legacy dataDownload NCBI UniSTS data

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