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Pr012394273

STS probe D2S2348 for autophagy related 16-like 1 (S. cerevisiae) (ATG16L1)

Synopsis

Field NameValues
NameD2S2348
Aliases345YC1; AFM345YC1; AFM345yc1; HS345YC1; RH30791; SHGC-20078; W4981
TypeSTS
Application
Source organism
Source sequence
Target organismHomo sapiens
Target geneATG16L1
UniSTS IDUniSTS:16248

Sequences

>Probe|12394273|PRIMERF Forward PCR primer (outermost) (19b)
AGTCTCTTGGAATGCTTGC
>Probe|12394273|PRIMERR Reverse PCR primer (outermost) (20b)
TCAGTATCTCGGTATCTCGG

References

1.

A physical map of human chromosome 7: an integrated YAC contig map with average STS spacing of 79 kb.

Bouffard GG, Idol JR, Braden VV, Iyer LM, Cunningham AF, Weintraub LA, Touchman JW, Mohr-Tidwell RM, Peluso DC, Fulton RS, Ueltzen MS, Weissenbach J, Magness CL, Green ED.

Genome Res. 1997 Jul;7(7):673-92.

2.

An STS-based radiation hybrid map of the human genome.

Stewart EA, McKusick KB, Aggarwal A, Bajorek E, Brady S, Chu A, Fang N, Hadley D, Harris M, Hussain S, Lee R, Maratukulam A, O'Connor K, Perkins S, Piercy M, Qin F, Reif T, Sanders C, She X, Sun WL, Tabar P, Voyticky S, Cowles S, Fan JB, Mader C, Quackenbush J, Myers RM, Cox DR.

Genome Res. 1997 May;7(5):422-33.

Show All 6 References...

3.

Comprehensive human genetic maps: individual and sex-specific variation in recombination.

Broman KW, Murray JC, Sheffield VC, White RL, Weber JL.

Am J Hum Genet. 1998 Sep;63(3):861-9.

4.

A high-resolution recombination map of the human genome.

Kong A, Gudbjartsson DF, Sainz J, Jonsdottir GM, Gudjonsson SA, Richardsson B, Sigurdardottir S, Barnard J, Hallbeck B, Masson G, Shlien A, Palsson ST, Frigge ML, Thorgeirsson TE, Gulcher JR, Stefansson K.

Nat Genet. 2002 Jul;31(3):241-7. Epub 2002 Jun 10.

5.

A comprehensive genetic map of the human genome based on 5,264 microsatellites.

Dib C, Fauré S, Fizames C, Samson D, Drouot N, Vignal A, Millasseau P, Marc S, Hazan J, Seboun E, Lathrop M, Gyapay G, Morissette J, Weissenbach J.

Nature. 1996 Mar 14;380(6570):152-4.

6.

A fast and scalable radiation hybrid map construction and integration strategy.

Agarwala R, Applegate DL, Maglott D, Schuler GD, Schäffer AA.

Genome Res. 2000 Mar;10(3):350-64.

Genetic maps for probe

OrganismMap TypeMap NameChromosomePositionMarker NameStatus
Homo sapiensradiation hybridStanford-G328877 cr10000SHGC-20078
Homo sapiensradiation hybridGeneMap99-G329716 cr10000AFM345yc1
Homo sapienslinkageRutgers Map2 cmD2S2348
Homo sapienslinkageMarshfield2242.17 cmAFM345yc1
Homo sapienslinkagedeCODE2240.81 cmD2S2348
Homo sapienslinkageGenethon2250 cmAFM345yc1
Homo sapiensradiation hybridNCBI RH21846.4 crAFM345yc1

Computational maps for probe

Analysis is pending.

Additional Data

Field NameValues
UniSTS IDcontext specific help for: UniSTS ID16248
Probe Cross-refcontext specific help for: Probe Cross-refGDB:613209
Download UniSTS epcr legacy dataDownload NCBI UniSTS data

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