A PopSet is a set of DNA sequences that have been collected to analyse the
evolutionary relatedness of a population. The population could originate from
different members of the same species, or from organisms from different
species. They are submitted to GenBank via
Sequin, often as a sequence alignment.
Example of a PopSet
The snapping shrimp (genus Alpheus) earns its
name from the noise made by the rapid shutting of
its snapping claw – used to stun or kill prey.
Alpheus is a particularly diverse genus, making it ideal to estimate
rates of evolution.
Sequence data
from two nuclear genes and one mitochondrial gene suggest that
Alpheus encompasses three major clades, consistent with previous
morphological data, and that specialized ecological requirements and
different claw morphologies have evolved independently several times.