Effects of Becn1 and Atg5 KD in Pdx1-reduced MIN6 cells. A, Becn1 and cleaved caspase-3 levels were measured by Western blot 11 days after infection with the control or shBecn1 vector. Nearly complete suppression of Becn1 to inhibit basal autophagy induced cleaved caspase-3. MIN6 cells exposed to 1 μm thapsigargin for 24 h were used as a positive control for cleaved caspase-3 (n = 2). PI-positive cells were increased from 3 ± 1 to 67 ± 4% in Becn1 KD MIN6 cells (*, p < 0.0001). B, Becn1 protein levels 7 days after coinfection with shPdx1 and shBecn1Δ30, shBecn1Δ50, or shBecn1Δ90 are shown in the inset (n = 3). Becn1Δ30 and Becn1Δ50 reduced the proportion of Pdx1 KD cells staining positive for PI from 41 ± 2 to 18 ± 2% (*, p < 0.01) and 7 ± 1% (**, p < 0.001), respectively. Becn1 KD by 90% (Becn1Δ90) increased the proportion of Pdx1 KD MIN6 cells staining with PI to 55 ± 4% (***, p < 0.001) (n = 3). C, following infection with a Pdx1 KD vector, MIN6 cells were exposed to lentivirus containing control, shBecn1, or shAtg5 vectors. On day 7, 39 ± 3% of Pdx1 KD cells stained positive for PI, whereas only 12 ± 2 and 7 ± 1% of Pdx1/Becn1 KD cells and Pdx1/Atg5 KD cells, respectively, stained with PI. On day 9, the proportion of PI-positive Pdx1/Becn1 KD cells and Pdx1/Atg5 KD cells increased to 44 ± 4 and 33 ± 6%, respectively (n = 3). Pdx1 KD versus Pdx1/Becn1 KD (*, p < 0.001) and Pdx1/Atg5 KD (*, p < 0.001) on day 7. The right panels show Western blots of Pdx1, Becn1, and Atg5 from the aforementioned experiments on day 7 (n = 3).