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Items: 1 to 20 of 79

1.
Identification of a Spliced Gene from Kaposi’s Sarcoma-Associated Herpesvirus Encoding a Protein with Similarities to Latent Membrane Proteins 1 and 2A of Epstein-Barr Virus
Mark Glenn, Lucille Rainbow, Frédéric Auradé, Andrew Davison, Thomas F. Schulz
J Virol. 1999 Aug; 73(8): 6953–6963. doi: 10.1128/jvi.73.8.6953-6963.1999
PMCID:
PMC112781
ArticlePDF–2.2M
2.
A comparative epigenome analysis of gammaherpesviruses suggests cis-acting sequence features as critical mediators of rapid polycomb recruitment
Thomas Günther, Jacqueline Fröhlich, Christina Herrde, Shinji Ohno, Lia Burkhardt, Heiko Adler, Adam Grundhoff
PLoS Pathog. 2019 Oct; 15(10): e1007838. Published online 2019 Oct 31. doi: 10.1371/journal.ppat.1007838
PMCID:
PMC6932816
ArticlePDF–5.3M
3.
Kaposi Sarcoma in Mantled Guereza
Anna Grewer, Martina Bleyer, Kerstin Mätz-Rensing, Alexander S. Hahn, Tim Rüggeberg, Gregor Babaryka, Andre Zimmermann, Stefan Pöhlmann, Artur Kaul
Emerg Infect Dis. 2019 Aug; 25(8): 1552–1555. doi: 10.3201/eid2508.181804
PMCID:
PMC6649314
ArticlePDF–2.0M
4.
An integrative approach identifies direct targets of the late viral transcription complex and an expanded promoter recognition motif in Kaposi’s sarcoma-associated herpesvirus
Divya Nandakumar, Britt Glaunsinger
PLoS Pathog. 2019 May; 15(5): e1007774. Published online 2019 May 16. doi: 10.1371/journal.ppat.1007774
PMCID:
PMC6541308
ArticlePDF–2.8M
5.
Classification of human Herpesviridae proteins using Domain-architecture Aware Inference of Orthologs (DAIO)
Christian M. Zmasek, David M. Knipe, Philip E. Pellett, Richard H. Scheuermann
Virology. 2019 Mar; 529: 29–42. Published online 2019 Jan 6. doi: 10.1016/j.virol.2019.01.005
PMCID:
PMC6502252
ArticlePDF–2.1M
6.
KSHV lytic proteins K-RTA and K8 bind to cellular and viral chromatin to modulate gene expression
Rajeev Kaul, Pravinkumar Purushothaman, Timsy Uppal, Subhash C. Verma
PLoS One. 2019; 14(4): e0215394. Published online 2019 Apr 18. doi: 10.1371/journal.pone.0215394
PMCID:
PMC6472759
ArticlePDF–1.7M
7.
Comparative Analysis of Gammaherpesvirus Circular RNA Repertoires: Conserved and Unique Viral Circular RNAs
Nathan A. Ungerleider, Vaibhav Jain, Yiping Wang, Nicholas J. Maness, Robert V. Blair, Xavier Alvarez, Cecily Midkiff, Dennis Kolson, Shanshan Bai, Claire Roberts, Walter N. Moss, Xia Wang, Jacqueline Serfecz, Michael Seddon, Terri Lehman, Tianfang Ma, Yan Dong, Rolf Renne, Scott A. Tibbetts, Erik K. Flemington
J Virol. 2019 Mar 15; 93(6): e01952-18. Prepublished online 2018 Dec 19. Published online 2019 Mar 5. doi: 10.1128/JVI.01952-18
PMCID:
PMC6401440
ArticlePDF–2.0M
8.
Genome-Wide Identification of Direct RTA Targets Reveals Key Host Factors for Kaposi’s Sarcoma-Associated Herpesvirus Lytic Reactivation
Bernadett Papp, Naeem Motlagh, Richard J. Smindak, Seung Jin Jang, Aria Sharma, Juan D. Alonso, Zsolt Toth
J Virol. 2019 Mar 1; 93(5): e01978-18. Prepublished online 2018 Dec 12. Published online 2019 Feb 19. doi: 10.1128/JVI.01978-18
PMCID:
PMC6384073
ArticlePDF–3.7M
9.
Evolutionary effects of the AID/APOBEC family of mutagenic enzymes on human gamma-herpesviruses
Teresa Martinez, Maxwell Shapiro, Sumita Bhaduri-McIntosh, Thomas MacCarthy
Virus Evol. 2019 Jan; 5(1): vey040. Published online 2019 Feb 11. doi: 10.1093/ve/vey040
PMCID:
PMC6371749
ArticlePDF–450K
10.
Screening human cell lines for viral infections applying RNA-Seq data analysis
Cord C. Uphoff, Claudia Pommerenke, Sabine A. Denkmann, Hans G. Drexler
PLoS One. 2019; 14(1): e0210404. Published online 2019 Jan 10. doi: 10.1371/journal.pone.0210404
PMCID:
PMC6328144
ArticlePDF–1.5M
11.
Quantitative RNAseq analysis of Ugandan KS tumors reveals KSHV gene expression dominated by transcription from the LTd downstream latency promoter
Timothy M. Rose, A. Gregory Bruce, Serge Barcy, Matt Fitzgibbon, Lisa R. Matsumoto, Minako Ikoma, Corey Casper, Jackson Orem, Warren Phipps
PLoS Pathog. 2018 Dec; 14(12): e1007441. Published online 2018 Dec 17. doi: 10.1371/journal.ppat.1007441
PMCID:
PMC6312348
ArticlePDF–5.1M
12.
Discovery of Kaposi’s sarcoma herpesvirus-encoded circular RNAs and a human antiviral circular RNA
Takanobu Tagawa, Shaojian Gao, Vishal N. Koparde, Mileidy Gonzalez, John L. Spouge, Anna P. Serquiña, Kathryn Lurain, Ramya Ramaswami, Thomas S. Uldrick, Robert Yarchoan, Joseph M. Ziegelbauer
Proc Natl Acad Sci U S A. 2018 Dec 11; 115(50): 12805–12810. Published online 2018 Nov 19. doi: 10.1073/pnas.1816183115
PMCID:
PMC6294913
ArticlePDF–1.1M
13.
Genome-Wide Sequence Analysis of Kaposi Sarcoma-Associated Herpesvirus Shows Diversification Driven by Recombination
Neneh Sallah, Anne L Palser, Simon J Watson, Nazzarena Labo, Gershim Asiki, Vickie Marshall, Robert Newton, Denise Whitby, Paul Kellam, Inês Barroso
J Infect Dis. 2018 Dec 1; 218(11): 1700–1710. Published online 2018 Jul 14. doi: 10.1093/infdis/jiy427
PMCID:
PMC6195662
ArticlePDF–2.8M
14.
Chromatin remodeling controls Kaposi's sarcoma-associated herpesvirus reactivation from latency
Sharon E. Hopcraft, Samantha G. Pattenden, Lindsey I. James, Stephen Frye, Dirk P. Dittmer, Blossom Damania
PLoS Pathog. 2018 Sep; 14(9): e1007267. Published online 2018 Sep 13. doi: 10.1371/journal.ppat.1007267
PMCID:
PMC6136816
ArticlePDF–5.8M
15.
Kaposi's Sarcoma-Associated Herpesvirus mRNA Accumulation in Nuclear Foci Is Influenced by Viral DNA Replication and Viral Noncoding Polyadenylated Nuclear RNA
Tenaya K. Vallery, Johanna B. Withers, Joana A. Andoh, Joan A. Steitz
J Virol. 2018 Jul 1; 92(13): e00220-18. Prepublished online 2018 Apr 11. Published online 2018 Jun 13. doi: 10.1128/JVI.00220-18
PMCID:
PMC6002709
ArticlePDF–4.2M
16.
RNA-Seq of Kaposi’s sarcoma reveals alterations in glucose and lipid metabolism
For Yue Tso, Andrew V. Kossenkov, Salum J. Lidenge, Owen Ngalamika, John R. Ngowi, Julius Mwaiselage, Jayamanna Wickramasinghe, Eun Hee Kwon, John T. West, Paul M. Lieberman, Charles Wood
PLoS Pathog. 2018 Jan; 14(1): e1006844. Published online 2018 Jan 19. doi: 10.1371/journal.ppat.1006844
PMCID:
PMC5792027
ArticlePDF–9.2M
17.
The Epstein-Barr Virus Episome Maneuvers between Nuclear Chromatin Compartments during Reactivation
Stephanie A. Moquin, Sean Thomas, Sean Whalen, Alix Warburton, Samantha G. Fernandez, Alison A. McBride, Katherine S. Pollard, JJ L. Miranda
J Virol. 2018 Feb 1; 92(3): e01413-17. Prepublished online 2017 Nov 15. Published online 2018 Jan 17. doi: 10.1128/JVI.01413-17
PMCID:
PMC5774889
ArticlePDF–1.1M
18.
KSHV episomes reveal dynamic chromatin loop formation with domain-specific gene regulation
Mel Campbell, Tadashi Watanabe, Kazushi Nakano, Ryan R. Davis, Yuanzhi Lyu, Clifford G. Tepper, Blythe Durbin-Johnson, Masahiro Fujimuro, Yoshihiro Izumiya
Nat Commun. 2018; 9: 49. Published online 2018 Jan 4. doi: 10.1038/s41467-017-02089-9
PMCID:
PMC5754359
ArticlePDF–2.5M
19.
Kaposi's Sarcoma-Associated Herpesvirus Utilizes and Manipulates RNA N6-Adenosine Methylation To Promote Lytic Replication
Fengchun Ye, E. Ricky Chen, Timothy W. Nilsen
J Virol. 2017 Aug 15; 91(16): e00466-17. Prepublished online 2017 Jun 7. Published online 2017 Jul 27. doi: 10.1128/JVI.00466-17
PMCID:
PMC5533915
ArticlePDF–3.5M
20.
K-mer Content, Correlation, and Position Analysis of Genome DNA Sequences for the Identification of Function and Evolutionary Features
Aaron Sievers, Katharina Bosiek, Marc Bisch, Chris Dreessen, Jascha Riedel, Patrick Froß, Michael Hausmann, Georg Hildenbrand
Genes (Basel) 2017 Apr; 8(4): 122. Published online 2017 Apr 19. doi: 10.3390/genes8040122
PMCID:
PMC5406869
ArticlePDF–15M

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