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Volume 16(1);  2015

Q and A

Muneesh Tewari
Genome Biol. 2015; 16(1): 47. Published online 2015 Feb 26. doi: 10.1186/s13059-015-0613-5
PMCID:
PMC4341870

Research Highlight

Ray Ming, Ching Man Wai
Genome Biol. 2015; 16(1): 27. Published online 2015 Jan 31. doi: 10.1186/s13059-015-0585-5
PMCID:
PMC4312463
Boxuan Simen Zhao, Chuan He
Genome Biol. 2015; 16(1): 43. Published online 2015 Feb 22. doi: 10.1186/s13059-015-0609-1
PMCID:
PMC4336730

Comment

Deanna M Church, Valerie A Schneider, Karyn Meltz Steinberg, Michael C Schatz, Aaron R Quinlan, Chen-Shan Chin, Paul A Kitts, Bronwen Aken, Gabor T Marth, Michael M Hoffman, Javier Herrero, M Lisandra Zepeda Mendoza, Richard Durbin, Paul Flicek
Genome Biol. 2015; 16(1): 13. Published online 2015 Jan 24. doi: 10.1186/s13059-015-0587-3
PMCID:
PMC4305238

Method

Haibao Tang, Xingtan Zhang, Chenyong Miao, Jisen Zhang, Ray Ming, James C Schnable, Patrick S Schnable, Eric Lyons, Jianguo Lu
Genome Biol. 2015; 16(1): 3. Published online 2015 Jan 13. doi: 10.1186/s13059-014-0573-1
PMCID:
PMC4305236
Yuan Gao, Jinfeng Wang, Fangqing Zhao
Genome Biol. 2015; 16(1): 4. Published online 2015 Jan 13. doi: 10.1186/s13059-014-0571-3
PMCID:
PMC4316645
Benjamin J Kelly, James R Fitch, Yangqiu Hu, Donald J Corsmeier, Huachun Zhong, Amy N Wetzel, Russell D Nordquist, David L Newsom, Peter White
Genome Biol. 2015; 16(1): 6. Published online 2015 Jan 20. doi: 10.1186/s13059-014-0577-x
PMCID:
PMC4333267
Lynnette Fernandez-Cuesta, Ruping Sun, Roopika Menon, Julie George, Susanne Lorenz, Leonardo A Meza-Zepeda, Martin Peifer, Dennis Plenker, Johannes M Heuckmann, Frauke Leenders, Thomas Zander, Ilona Dahmen, Mirjam Koker, Jakob Schöttle, Roland T Ullrich, Janine Altmüller, Christian Becker, Peter Nürnberg, Henrik Seidel, Diana Böhm, Friederike Göke, Sascha Ansén, Prudence A Russell, Gavin M Wright, Zoe Wainer, Benjamin Solomon, Iver Petersen, Joachim H Clement, Jörg Sänger, Odd-Terje Brustugun, Åslaug Helland, Steinar Solberg, Marius Lund-Iversen, Reinhard Buettner, Jürgen Wolf, Elisabeth Brambilla, Martin Vingron, Sven Perner, Stefan A Haas, Roman K Thomas
Genome Biol. 2015; 16(1): 7. Published online 2015 Jan 5. doi: 10.1186/s13059-014-0558-0
PMCID:
PMC4300615
Zheng Chang, Guojun Li, Juntao Liu, Yu Zhang, Cody Ashby, Deli Liu, Carole L Cramer, Xiuzhen Huang
Genome Biol. 2015; 16(1): 30. Published online 2015 Feb 11. doi: 10.1186/s13059-015-0596-2
PMCID:
PMC4342890

Software

Brian Tjaden
Genome Biol. 2015; 16(1): 1. Published online 2015 Jan 13. doi: 10.1186/s13059-014-0572-2
PMCID:
PMC4316799
Marina Lizio, Jayson Harshbarger, Hisashi Shimoji, Jessica Severin, Takeya Kasukawa, Serkan Sahin, Imad Abugessaisa, Shiro Fukuda, Fumi Hori, Sachi Ishikawa-Kato, Christopher J Mungall, Erik Arner, J Kenneth Baillie, Nicolas Bertin, Hidemasa Bono, Michiel de Hoon, Alexander D Diehl, Emmanuel Dimont, Tom C Freeman, Kaori Fujieda, Winston Hide, Rajaram Kaliyaperumal, Toshiaki Katayama, Timo Lassmann, Terrence F Meehan, Koro Nishikata, Hiromasa Ono, Michael Rehli, Albin Sandelin, Erik A Schultes, Peter AC ‘t Hoen, Zuotian Tatum, Mark Thompson, Tetsuro Toyoda, Derek W Wright, Carsten O Daub, Masayoshi Itoh, Piero Carninci, Yoshihide Hayashizaki, Alistair RR Forrest, Hideya Kawaji, the FANTOM consortium
Genome Biol. 2015; 16(1): 22. Published online 2015 Jan 5. doi: 10.1186/s13059-014-0560-6
PMCID:
PMC4310165

Open Letters

Lél Eöry, M Thomas P Gilbert, Cai Li, Bo Li, Alan Archibald, Bronwen L Aken, Guojie Zhang, Erich Jarvis, Paul Flicek, David W Burt
Genome Biol. 2015; 16(1): 21. Published online 2015 Jan 29. doi: 10.1186/s13059-015-0588-2
PMCID:
PMC4310197
Helga Thorvaldsdóttir, James T Robinson, Douglass Turner, Jill P Mesirov
Genome Biol. 2015; 16(1): 46. Published online 2015 Feb 26. doi: 10.1186/s13059-015-0595-3
PMCID:
PMC4342165

Research

Lorenzo de la Rica, Antonio García-Gómez, Natalia R Comet, Javier Rodríguez-Ubreva, Laura Ciudad, Roser Vento-Tormo, Carlos Company, Damiana Álvarez-Errico, Mireia García, Carmen Gómez-Vaquero, Esteban Ballestar
Genome Biol. 2015; 16(1): 2. Published online 2015 Jan 5. doi: 10.1186/s13059-014-0561-5
PMCID:
PMC4290566
Sara Tomaselli, Federica Galeano, Shahar Alon, Susanna Raho, Silvia Galardi, Vinicia Assunta Polito, Carlo Presutti, Sara Vincenti, Eli Eisenberg, Franco Locatelli, Angela Gallo
Genome Biol. 2015; 16(1): 5. Published online 2015 Jan 13. doi: 10.1186/s13059-014-0575-z
PMCID:
PMC4326501
Miles C Benton, Alice Johnstone, David Eccles, Brennan Harmon, Mark T Hayes, Rod A Lea, Lyn Griffiths, Eric P Hoffman, Richard S Stubbs, Donia Macartney-Coxson
Genome Biol. 2015; 16(1): 8. Published online 2015 Jan 22. doi: 10.1186/s13059-014-0569-x
PMCID:
PMC4301800
Joseph Costello, Lydia M Castelli, William Rowe, Christopher J Kershaw, David Talavera, Sarah S Mohammad-Qureshi, Paul F G Sims, Christopher M Grant, Graham D Pavitt, Simon J Hubbard, Mark P Ashe
Genome Biol. 2015; 16(1): 10. Published online 2015 Jan 5. doi: 10.1186/s13059-014-0559-z
PMCID:
PMC4302535
Colm E Nestor, Raffaele Ottaviano, Diana Reinhardt, Hazel A Cruickshanks, Heidi K Mjoseng, Rhoanne C McPherson, Antonio Lentini, John P Thomson, Donncha S Dunican, Sari Pennings, Stephen M Anderton, Mikael Benson, Richard R Meehan
Genome Biol. 2015; 16(1): 11. Published online 2015 Feb 4. doi: 10.1186/s13059-014-0576-y
PMCID:
PMC4334405
Michael D Nowak, Giancarlo Russo, Ralph Schlapbach, Cuong Nguyen Huu, Michael Lenhard, Elena Conti
Genome Biol. 2015; 16(1): 12. Published online 2015 Jan 24. doi: 10.1186/s13059-014-0567-z
PMCID:
PMC4305239
Haoxuan Liu, Xiaohui Zhang, Ju Huang, Jian-Qun Chen, Dacheng Tian, Laurence D Hurst, Sihai Yang
Genome Biol. 2015; 16(1): 15. Published online 2015 Jan 2. doi: 10.1186/s13059-014-0566-0
PMCID:
PMC4305242
Sebastian Kurscheid, Pierre Bady, Davide Sciuscio, Ivana Samarzija, Tal Shay, Irene Vassallo, Wim V Criekinge, Roy T Daniel, Martin J van den Bent, Christine Marosi, Michael Weller, Warren P Mason, Eytan Domany, Roger Stupp, Mauro Delorenzi, Monika E Hegi
Genome Biol. 2015; 16(1): 16. Published online 2015 Jan 27. doi: 10.1186/s13059-015-0583-7
PMCID:
PMC4342872
Emilia L Lim, Diane L Trinh, David W Scott, Andy Chu, Martin Krzywinski, Yongjun Zhao, A Gordon Robertson, Andrew J Mungall, Jacqueline Schein, Merrill Boyle, Anja Mottok, Daisuke Ennishi, Nathalie A Johnson, Christian Steidl, Joseph M Connors, Ryan D Morin, Randy D Gascoyne, Marco A Marra
Genome Biol. 2015; 16(1): 18. Published online 2015 Jan 29. doi: 10.1186/s13059-014-0568-y
PMCID:
PMC4308918
Amelia Hubbard, Clare M Lewis, Kentaro Yoshida, Ricardo H Ramirez-Gonzalez, Claude de Vallavieille-Pope, Jane Thomas, Sophien Kamoun, Rosemary Bayles, Cristobal Uauy, Diane GO Saunders
Genome Biol. 2015; 16(1): 23. Published online 2015 Feb 25. doi: 10.1186/s13059-015-0590-8
PMCID:
PMC4342793
Lam C Tsoi, Matthew K Iyer, Philip E Stuart, William R Swindell, Johann E Gudjonsson, Trilokraj Tejasvi, Mrinal K Sarkar, Bingshan Li, Jun Ding, John J Voorhees, Hyun M Kang, Rajan P Nair, Arul M Chinnaiyan, Goncalo R Abecasis, James T Elder
Genome Biol. 2015; 16(1): 24. Published online 2015 Jan 30. doi: 10.1186/s13059-014-0570-4
PMCID:
PMC4311508

Erratum

Sarah D Kocher, Cai Li, Wei Yang, Hao Tan, Soojin V Yi, Xingyu Yang, Hopi E Hoekstra, Guojie Zhang, Naomi E Pierce, Douglas W Yu
Genome Biol. 2015; 16(1): 34. Published online 2015 Feb 12. doi: 10.1186/s13059-014-0574-0
PMCID:
PMC4326530

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