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Other Issues: Journal List
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Research articles Prediction of microRNAs affecting mRNA expression during retinal development Amit Arora, Jasenka Guduric-Fuchs, Laura Harwood, Margaret Dellett, Tiziana Cogliati, and David A Simpson PMCID: PMC2821300 Intact fetal ovarian cord formation promotes mouse oocyte survival and development Cory R Nicholas, Kelly M Haston, and Renee A Reijo Pera PMCID: PMC2830955 The role of vasculature and blood circulation in zebrafish swimbladder development Cecilia Lanny Winata, Svetlana Korzh, Igor Kondrychyn, Vladimir Korzh, and Zhiyuan Gong PMCID: PMC2820434 Characterization of the Six1 homeobox gene in normal mammary gland morphogenesis Ricardo D Coletta, Erica L McCoy, Valerie Burns, Kiyoshi Kawakami, James L McManaman, John J Wysolmerski, and Heide L Ford PMCID: PMC2823684 Developmental cues and persistent neurogenic potential within an in vitro neural niche Chris Pierret, Jason A Morrison, Prakash Rath, Rachel E Zigler, Laura A Engel, Corinne L Fairchild, Huidong Shi, Joel A Maruniak, and Mark D Kirk PMCID: PMC2824744 Downstream genes of Pax6 revealed by comprehensive transcriptome profiling in the developing rat hindbrain Keiko Numayama-Tsuruta, Yoko Arai, Masanori Takahashi, Makiko Sasaki-Hoshino, Nobuo Funatsu, Shun Nakamura, and Noriko Osumi PMCID: PMC2818624 Disruption of zebrafish cyclin G-associated kinase (GAK) function impairs the expression of Notch-dependent genes during neurogenesis and causes defects in neuronal development Ting Bai, Jamie L Seebald, Kyu-Eui Kim, Hong-Mei Ding, Daniel P Szeto, and Henry C Chang PMCID: PMC2821301 Analysis of retinal cell development in chick embryo by immunohistochemistry and in ovo electroporation techniques Sung Tae Doh, Hailing Hao, Stephanie C Loh, Tapan Patel, Haim Y Tawil, David K Chen, Anna Pashkova, Andy Shen, Huimin Wang, and Li Cai PMCID: PMC2822752 Cloning and expression of SOLD1 in ovine and caprine placenta, and their expected roles during the development of placentomes Koichi Ushizawa, Toru Takahashi, Misa Hosoe, Keiichiro Kizaki, and Kazuyoshi Hashizume PMCID: PMC2828410 A comparative study of prenatal development in Miniopterus schreibersii fuliginosus, Hipposideros armiger and H. pratti Zhe Wang, Naijian Han, Paul A Racey, Binghua Ru, and Guimei He PMCID: PMC2824742 Remobilization of Tol2 transposons in Xenopus tropicalis Donald A Yergeau, Clair M Kelley, Emin Kuliyev, Haiqing Zhu, Amy K Sater, Dan E Wells, and Paul E Mead PMCID: PMC2848417 Sex and the single embryo: early deveopment in the Mediterranean fruit fly, Ceratitis capitata Paolo Gabrieli, Andrea Falaguerra, Paolo Siciliano, Ludvik M Gomulski, Francesca Scolari, Antigone Zacharopoulou, Gerald Franz, Anna R Malacrida, and Giuliano Gasperi PMCID: PMC2826288 Activated Ras alters lens and corneal development through induction of distinct downstream targets Daniel Burgess, Yan Zhang, Ed Siefker, Ryan Vaca, Murali R Kuracha, Lixing Reneker, Paul A Overbeek, and Venkatesh Govindarajan PMCID: PMC2828409 Characterization of the astacin family of metalloproteases in C. elegans Ja-On Park, Jie Pan, Frank Möhrlen, Marcus-Oliver Schupp, Robert Johnsen, David L Baillie, Richard Zapf, Donald G Moerman, and Harald Hutter PMCID: PMC2824743 BMP-2 functions independently of SHH signaling and triggers cell condensation and apoptosis in regenerating axolotl limbs Jean-Charles Guimond, Mathieu Lévesque, Pierre-Luc Michaud, Jérémie Berdugo, Kenneth Finnson, Anie Philip, and Stéphane Roy PMCID: PMC2829471 Analysis of chick (Gallus gallus) middle ear columella formation Jamie L Wood, Ami J Hughes, Kathryn J Mercer, and Susan C Chapman PMCID: PMC2834582 Generation and characterization of a Tet-On (rtTA-M2) transgenic rat Yi Sheng, Chih-Cheng Lin, Junming Yue, Meena Sukhwani, Jennifer J Shuttleworth, Tianjiao Chu, and Kyle E Orwig PMCID: PMC2834583 SEL1L deficiency impairs growth and differentiation of pancreatic epithelial cells Shuai Li, Adam B Francisco, Robert J Munroe, John C Schimenti, and Qiaoming Long PMCID: PMC2848149 Teratogen-induced alterations in microRNA-34, microRNA-125b and microRNA-155 expression: correlation with embryonic p53 genotype and limb phenotype Keren Gueta, Natali Molotski, Natalie Gerchikov, Eyal Mor, Shoshana Savion, Amos Fein, Vladimir Toder, Noam Shomron, and Arkady Torchinsky PMCID: PMC2841584 Dynamics of muscle fibre growth during postnatal mouse development Robert B White, Anne-Sophie Biérinx, Viola F Gnocchi, and Peter S Zammit PMCID: PMC2836990 Activation of p38 MAPK pathway in the skull abnormalities of Apert syndrome Fgfr2+P253R mice Yingli Wang, Miao Sun, Victoria L Uhlhorn, Xueyan Zhou, Inga Peter, Neus Martinez-Abadias, Cheryl A Hill, Christopher J Percival, Joan T Richtsmeier, David L Huso, and Ethylin Wang Jabs PMCID: PMC2838826 Spatial discontinuity of Optomotor-blind expression in the Drosophila wing imaginal disc disrupts epithelial architecture and promotes cell sorting Jie Shen, Christian Dahmann, and Gert O Pflugfelder PMCID: PMC2838827 The chick somitogenesis oscillator is arrested before all paraxial mesoderm is segmented into somites Gennady Tenin, David Wright, Zoltan Ferjentsik, Robert Bone, Michael J McGrew, and Miguel Maroto PMCID: PMC2836991 Germ band retraction as a landmark in glucose metabolism during Aedes aegypti embryogenesis Wagner Vital, Gustavo Lazzaro Rezende, Leonardo Abreu, Jorge Moraes, Francisco JA Lemos, Itabajara da Silva Vaz, Jr, and Carlos Logullo PMCID: PMC2838828 Functional conservation between rodents and chicken of regulatory sequences driving skeletal muscle gene expression in transgenic chickens Michael J McGrew, Adrian Sherman, Simon G Lillico, Lorna Taylor, and Helen Sang PMCID: PMC2841079 DNA methylation patterns in tissues from mid-gestation bovine foetuses produced by somatic cell nuclear transfer show subtle abnormalities in nuclear reprogramming Christine Couldrey and Rita SF Lee PMCID: PMC2848150 Cell cycle arrest by a gradient of Dpp signaling during Drosophila eye development Lucy C Firth, Abhishek Bhattacharya, and Nicholas E Baker PMCID: PMC2846880 Molecular profiling of the developing mouse axial skeleton: a role for Tgfbr2 in the development of the intervertebral disc Philip Sohn, Megan Cox, Dongquan Chen, and Rosa Serra PMCID: PMC2848151 Neuropeptidomic analysis of the embryonic Japanese quail diencephalon Birger Scholz, Henrik Alm, Anna Mattsson, Anna Nilsson, Kim Kultima, Mikhail M Savitski, Maria Fälth, Karl Sköld, Björn Brunström, Per E Andren, and Lennart Dencker PMCID: PMC2851587 Donor-host mitochondrial compatibility improves efficiency of bovine somatic cell nuclear transfer Zhong-hai Yan, Yi-ye Zhou, Jing Fu, Fei Jiao, Lei-wen Zhao, Peng-fei Guan, Shu-zhen Huang, Yi-tao Zeng, and Fanyi Zeng PMCID: PMC2858029 Ectodermal Wnt6 is an early negative regulator of limb chondrogenesis in the chicken embryo Poongodi Geetha-Loganathan, Suresh Nimmagadda, Bodo Christ, Ruijin Huang, and Martin Scaal PMCID: PMC2859743 An allele separating skeletal patterning and spermatogonial renewal functions of PLZF Yung-Hao Ching, Lawriston A Wilson, and John C Schimenti PMCID: PMC2859375 The function and regulation of the bHLH gene, cato, in Drosophila neurogenesis Petra I zur Lage and Andrew P Jarman PMCID: PMC2851588 Complexity of cis-regulatory organization of six3a during forebrain and eye development in zebrafish Chung-Hao Chao, Horng-Dar Wang, and Chiou-Hwa Yuh PMCID: PMC2858731 Effects of varying Notch1 signal strength on embryogenesis and vasculogenesis in compound mutant heterozygotes Changhui Ge and Pamela Stanley PMCID: PMC2865454 The endocytic recycling regulator EHD1 is essential for spermatogenesis and male fertility in mice Mark A Rainey, Manju George, GuoGuang Ying, Reiko Akakura, Daniel J Burgess, Ed Siefker, Tom Bargar, Lynn Doglio, Susan E Crawford, Gordon L Todd, Venkatesh Govindarajan, Rex A Hess, Vimla Band, Mayumi Naramura, and Hamid Band PMCID: PMC2856533 Exocrine-to-endocrine differentiation is detectable only prior to birth in the uninjured mouse pancreas Daniel Kopinke and L Charles Murtaugh PMCID: PMC2858732 Relative roles of the different Pax6 domains for pancreatic alpha cell development Petra Dames, Ramona Puff, Michaela Weise, Klaus G Parhofer, Burkhard Göke, Magdalena Götz, Jochen Graw, Jack Favor, and Andreas Lechner PMCID: PMC2858030 The Drosophila Fry protein interacts with Trc and is highly mobile in vivo Xiaolan Fang, Qiuheng Lu, Kazou Emoto, and Paul N Adler PMCID: PMC2868802 Pre-gastrula expression of zebrafish extraembryonic genes Sung-Kook Hong, Carly S Levin, Jamie L Brown, Haiyan Wan, Brad T Sherman, Da Wei Huang, Richard A Lempicki, and Benjamin Feldman PMCID: PMC2873407 Variations in morphology and PSII photosynthetic capabilities during the early development of tetraspores of Gracilaria vermiculophylla (Ohmi) Papenfuss (Gracilariales, Rhodophyta) Xiujun Xie, Guangce Wang, Guanghua Pan, Shan Gao, Pu Xu, and Jianyi Zhu PMCID: PMC2873408 Human intronic enhancers control distinct sub-domains of Gli3 expression during mouse CNS and limb development Amir A Abbasi, Zissis Paparidis, Sajid Malik, Fiona Bangs, Ansgar Schmidt, Sabine Koch, Javier Lopez-Rios, and Karl-Heinz Grzeschik PMCID: PMC2875213 Gene up-regulation in response to predator kairomones in the water flea, Daphnia pulex Hitoshi Miyakawa, Maki Imai, Naoki Sugimoto, Yuki Ishikawa, Asano Ishikawa, Hidehiko Ishigaki, Yasukazu Okada, Satoshi Miyazaki, Shigeyuki Koshikawa, Richard Cornette, and Toru Miura PMCID: PMC2888767 Knockout of the folate transporter folt-1 causes germline and somatic defects in C. elegans Misa U Austin, Wei-Siang Liau, Krishnaswamy Balamurugan, Balasubramaniem Ashokkumar, Hamid M Said, and Craig W LaMunyon PMCID: PMC2874772 Characterization of adipocyte differentiation from human mesenchymal stem cells in bone marrow Shu-Wen Qian, Xi Li, You-You Zhang, Hai-Yan Huang, Yuan Liu, Xia Sun, and Qi-Qun Tang PMCID: PMC2881898 Conditional expression of Spry1 in neural crest causes craniofacial and cardiac defects Xuehui Yang, Sean Kilgallen, Viktoria Andreeva, Douglas B Spicer, Ilka Pinz, and Robert Friesel PMCID: PMC2874773 The long noncoding RNA RNCR2 directs mouse retinal cell specification Nicole A Rapicavoli, Erin M Poth, and Seth Blackshaw PMCID: PMC2876091 Rescue of placental phenotype in a mechanistic model of Beckwith-Wiedemann syndrome Rosemary Oh-McGinnis, Aaron B Bogutz, Kang Yun Lee, Michael J Higgins, and Louis Lefebvre PMCID: PMC2881899 Conservation of MAP kinase activity and MSP genes in parthenogenetic nematodes Peter Heger, Michael Kroiher, Nsah Ndifon, and Einhard Schierenberg PMCID: PMC2893452 Emergence and migration of trunk neural crest cells in a snake, the California Kingsnake (Lampropeltis getula californiae) Michelle Reyes, Katrina Zandberg, Iska Desmawati, and Maria E de Bellard PMCID: PMC2886003 Analysis of the asymmetrically expressed Ablim1 locus reveals existence of a lateral plate Nodal-independent left sided signal and an early, left-right independent role for nodal flow Jonathan Stevens, Alexander Ermakov, Jose Braganca, Helen Hilton, Peter Underhill, Shoumo Bhattacharya, Nigel A Brown, and Dominic P Norris PMCID: PMC2885315 C. elegans ten-1 is synthetic lethal with mutations in cytoskeleton regulators, and enhances many axon guidance defective mutants Catarina Mörck, Vivekanand Vivekanand, Gholamali Jafari, and Marc Pilon PMCID: PMC2887410 Functional characterization of the vertebrate primary ureter: Structure and ion transport mechanisms of the pronephric duct in axolotl larvae (Amphibia) Birgitte M Haugan, Kenneth A Halberg, Åse Jespersen, Lea R Prehn, and Nadja Møbjerg PMCID: PMC2891660 Identification of the heart as the critical site of adenosine mediated embryo protection Christopher C Wendler, Ryan R Poulsen, Satish Ghatpande, Robert W Greene, and Scott A Rivkees PMCID: PMC2890593 Zebrafish teeth as a model for repetitive epithelial morphogenesis: dynamics of E-cadherin expression Barbara Verstraeten, Ellen Sanders, Jolanda van Hengel, and Ann Huysseune PMCID: PMC2890594 Copine A plays a role in the differentiation of stalk cells and the initiation of culmination in Dictyostelium development Tasha S Smith, Jaimie M Pineda, Alex C Donaghy, and Cynthia K Damer PMCID: PMC2890595 Regulation of genes affecting body size and innate immunity by the DBL-1/BMP-like pathway in Caenorhabditis elegans Andrew F Roberts, Tina L Gumienny, Ryan J Gleason, Huang Wang, and Richard W Padgett PMCID: PMC2894779 The homolog of Ciboulot in the termite (Hodotermopsis sjostedti): a multimeric β-thymosin involved in soldier-specific morphogenesis Shigeyuki Koshikawa, Richard Cornette, Tadao Matsumoto, and Toru Miura PMCID: PMC2896938 Optimization of somatic cell injection in the perspective of nuclear transfer in goldfish Pierre-Yves Le Bail, Alexandra Depince, Nathalie Chenais, Sophie Mahe, Gerard Maisse, and Catherine Labbe PMCID: PMC2889862 An in vivo RNA interference screen identifies gene networks controlling Drosophila melanogaster blood cell homeostasis Amélie Avet-Rochex, Karène Boyer, Cédric Polesello, Vanessa Gobert, Dani Osman, Fernando Roch, Benoit Augé, Jennifer Zanet, Marc Haenlin, and Lucas Waltzer PMCID: PMC2891661 Inactivation of Dicer1 in Steroidogenic factor 1-positive cells reveals tissue-specific requirement for Dicer1 in adrenal, testis, and ovary Chen-Che J Huang and Humphrey HC Yao PMCID: PMC2897782 Gene trap mutation of murine Outer dense fiber protein-2 gene can result in sperm tail abnormalities in mice with high percentage chimaerism Heide Tarnasky, Min Cheng, Young Ou, Jacob C Thundathil, Richard Oko, and Frans A van der Hoorn PMCID: PMC2894780 Research Articles Postnatal development of collagen structure in ovine articular cartilage Mark C van Turnhout, Henk Schipper, Bas Engel, Willem Buist, Sander Kranenbarg, and Johan L van Leeuwen PMCID: PMC2906441 Drosophila mitoferrin is essential for male fertility: evidence for a role of mitochondrial iron metabolism during spermatogenesis Christoph Metzendorf and Maria I Lind PMCID: PMC2905335 Tgfβ2 and 3 are coexpressed with their extracellular regulator Ltbp1 in the early limb bud and modulate mesodermal outgrowth and BMP signaling in chicken embryos Carlos I Lorda-Diez, Juan A Montero, Juan A Garcia-Porrero, and Juan M Hurle PMCID: PMC2906442 Changes in creatine transporter function during cardiac maturation in the rat Alexandra Fischer, Michiel ten Hove, Liam Sebag-Montefiore, Helga Wagner, Kieran Clarke, Hugh Watkins, Craig A Lygate, and Stefan Neubauer PMCID: PMC2909979 Analysis of inhibitor of apoptosis protein family expression during mammary gland development Thomas W Owens, Fiona M Foster, Jolanta Tanianis-Hughes, Julia Y Cheung, Lisa Brackenbury, and Charles H Streuli PMCID: PMC2905336 Embryonic vascular endothelial cells are malleable to reprogramming via Prox1 to a lymphatic gene signature Harold Kim, Vicky PKH Nguyen, Tatiana V Petrova, Maribelle Cruz, Kari Alitalo, and Daniel J Dumont PMCID: PMC2909156 Deletion of Irs2 causes reduced kidney size in mice: role for inhibition of GSK3β? Rosemarie M Carew, Marianna Sadagurski, Roel Goldschmeding, Finian Martin, Morris F White, and Derek P Brazil PMCID: PMC2910663 Conservation of ParaHox genes' function in patterning of the digestive tract of the marine gastropod Gibbula varia Leyli Samadi and Gerhard Steiner PMCID: PMC2913954 Paralysis and delayed Z-disc formation in the Xenopus tropicalis unc45b mutant dicky ticker Timothy J Geach and Lyle B Zimmerman PMCID: PMC2919470 A novel transgenic zebrafish model for blood-brain and blood-retinal barrier development Jing Xie, Eric Farage, Masahiko Sugimoto, and Bela Anand-Apte PMCID: PMC2914679 Expression pattern of the thrombopoietin receptor (Mpl) in the murine central nervous system Anna Ivanova, Jens Wuerfel, Juan Zhang, Olaf Hoffmann, Matthias Ballmaier, and Christof Dame PMCID: PMC2921376 The C. elegans Hox gene ceh-13 regulates cell migration and fusion in a non-colinear way. Implications for the early evolution of Hox clusters Borbála Tihanyi, Tibor Vellai, Ágnes Regős, Eszter Ari, Fritz Müller, and Krisztina Takács-Vellai PMCID: PMC2915959 KeaA, a Dictyostelium kelch-domain protein that regulates the response to stress and development Luciana Mantzouranis, Raquel Bagattini, and Glaucia M Souza PMCID: PMC2920877 Distance measurements via the morphogen gradient of Bicoid in Drosophila embryos Feng He, Ying Wen, David Cheung, Jingyuan Deng, Long J Lu, Renjie Jiao, and Jun Ma PMCID: PMC2919471 mab-31 and the TGF-β pathway act in the ray lineage to pattern C. elegans male sensory rays Yan-Fung Wong, Qing Sheng, Janet WL Chung, Jacky KF Chan, and King L Chow PMCID: PMC2921377 Analysis of Thisbe and Pyramus functional domains reveals evidence for cleavage of Drosophila FGFs Sarah Tulin and Angelike Stathopoulos PMCID: PMC2923630 Involvement of the Reck tumor suppressor protein in maternal and embryonic vascular remodeling in mice Ediriweera PS Chandana, Yasuhiro Maeda, Akihiko Ueda, Hiroshi Kiyonari, Naoko Oshima, Mako Yamamoto, Shunya Kondo, Junseo Oh, Rei Takahashi, Yoko Yoshida, Satoshi Kawashima, David B Alexander, Hitoshi Kitayama, Chiaki Takahashi, Yasuhiko Tabata, Tomoko Matsuzaki, and Makoto Noda PMCID: PMC2923112 Characterisation of the role of Vrp1 in cell fusion during the development of visceral muscle of Drosophila melanogaster Therese Eriksson, Gaurav Varshney, Pontus Aspenström, and Ruth H Palmer PMCID: PMC2931478 The novel mouse mutant, chuzhoi, has disruption of Ptk7 protein and exhibits defects in neural tube, heart and lung development and abnormal planar cell polarity in the ear Anju Paudyal, Christine Damrau, Victoria L Patterson, Alexander Ermakov, Caroline Formstone, Zuzanna Lalanne, Sara Wells, Xiaowei Lu, Dominic P Norris, Charlotte H Dean, Deborah J Henderson, and Jennifer N Murdoch PMCID: PMC2930600 Granzyme G is expressed in the two-cell stage mouse embryo and is required for the maternal-zygotic transition Tung-Chou Tsai, William Lin, Shang-Hsun Yang, Winston TK Cheng, En-Hui Cheng, Maw-Sheng Lee, Kowit-Yu Chong, and Chuan-Mu Chen PMCID: PMC2930601 Methodology Articles Micro-computed tomography-based phenotypic approaches in embryology: procedural artifacts on assessments of embryonic craniofacial growth and development Eric J Schmidt, Trish E Parsons, Heather A Jamniczky, Julian Gitelman, Cvett Trpkov, Julia C Boughner, C Cairine Logan, Christoph W Sensen, and Benedikt Hallgrímsson PMCID: PMC2836989 Showing their true colors: a practical approach to volume rendering from serial sections Stephan Handschuh, Thomas Schwaha, and Brian D Metscher PMCID: PMC2876090 Functionality of the GAL4/UAS system in Tribolium requires the use of endogenous core promoters Johannes B Schinko, Markus Weber, Ivana Viktorinova, Alexandros Kiupakis, Michalis Averof, Martin Klingler, Ernst A Wimmer, and Gregor Bucher PMCID: PMC2882914 Culture of human pluripotent stem cells using completely defined conditions on a recombinant E-cadherin substratum Masato Nagaoka, Karim Si-Tayeb, Toshihiro Akaike, and Stephen A Duncan PMCID: PMC2896937 Generation of human induced pluripotent stem cells by simple transient transfection of plasmid DNA encoding reprogramming factors Karim Si-Tayeb, Fallon K Noto, Ana Sepac, Filip Sedlic, Zeljko J Bosnjak, John W Lough, and Stephen A Duncan PMCID: PMC2923111 Production of erythriod cells from human embryonic stem cells by fetal liver cell extract treatment Yu-xiao Liu, Wen Yue, Lei Ji, Xue Nan, and Xue-tao Pei PMCID: PMC2929223 Other Issues: Journal List
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