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Volume 107(1);  January 5, 2010
This Week in PNAS
In This Issue
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 1–2. Published online 2009 December 29. doi: 10.1073/iti0110107.
PMCID: PMC2806731
| Free in PMC on 2010/07/05 |
Commentary
DAMD to epigenetic silence
T. Kelly and P. Jones
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 3–4. Published online 2009 December 29. doi: 10.1073/pnas.0913289107.
PMCID: PMC2806768
| Free in PMC on 2010/07/05 |
Physical Sciences
Applied Physical Sciences
Stochastic fate of p53-mutant epidermal progenitor cells is tilted toward proliferation by UV B during preneoplasia
Allon M. Klein, Douglas E. Brash, Philip H. Jones, and Benjamin D. Simons
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 270–275. Published online 2009 December 29. doi: 10.1073/pnas.0909738107.
PMCID: PMC2806764
| Free in PMC on 2010/07/05 |
Chemistry
DNA aptamer–micelle as an efficient detection/delivery vehicle toward cancer cells
Yanrong Wu, Kwame Sefah, Haipeng Liu, Ruowen Wang, and Weihong Tan
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 5–10. Published online 2009 December 21. doi: 10.1073/pnas.0909611107.
PMCID: PMC2806697
| Free in PMC on 2010/07/05 |
Computer Sciences
Whole-proteome phylogeny of prokaryotes by feature frequency profiles: An alignment-free method with optimal feature resolution
Se-Ran Jun, Gregory E. Sims, Guohong A. Wu, and Sung-Hou Kim
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 133–138. Published online 2009 December 29. doi: 10.1073/pnas.0913033107.
PMCID: PMC2806744
| Free in PMC on 2010/07/05 |
Physics
Subnanometer atomic force microscopy of peptide–mineral interactions links clustering and competition to acceleration and catastrophe
R. W. Friddle, M. L. Weaver, S. R. Qiu, A. Wierzbicki, W. H. Casey, and J. J. De Yoreo
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 11–15. Published online 2009 November 23. doi: 10.1073/pnas.0908205107.
PMCID: PMC2793304
Biological Sciences
Agricultural Sciences
General principles of attraction and competitive attraction as revealed by large-cage studies of moths responding to sex pheromone
J. R. Miller, P. S. McGhee, P. Y. Siegert, C. G. Adams, J. Huang, M. J. Grieshop, and L. J. Gut
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 22–27. Published online 2009 December 29. doi: 10.1073/pnas.0908453107.
PMCID: PMC2806766
Applied Biological Sciences
DNA aptamer–micelle as an efficient detection/delivery vehicle toward cancer cells
Yanrong Wu, Kwame Sefah, Haipeng Liu, Ruowen Wang, and Weihong Tan
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 5–10. Published online 2009 December 21. doi: 10.1073/pnas.0909611107.
PMCID: PMC2806697
| Free in PMC on 2010/07/05 |
Biochemistry
Coxibs interfere with the action of aspirin by binding tightly to one monomer of cyclooxygenase-1
Gilad Rimon, Ranjinder S. Sidhu, D. Adam Lauver, Jullia Y. Lee, Narayan P. Sharma, Chong Yuan, Ryan A. Frieler, Raymond C. Trievel, Benedict R. Lucchesi, and William L. Smith
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 28–33. Published online 2009 November 30. doi: 10.1073/pnas.0909765106.
PMCID: PMC2806742
| Free in PMC on 2010/07/05 |
Cell Biology
A protein kinase network regulates the function of aminophospholipid flippases
Françoise M. Roelants, Alexander G. Baltz, Amy E. Trott, Sol Fereres, and Jeremy Thorner
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 34–39. Published online 2009 December 29. doi: 10.1073/pnas.0912497106.
PMCID: PMC2806694
Defined factors induce reprogramming of gastrointestinal cancer cells
Norikatsu Miyoshi, Hideshi Ishii, Ken-ichi Nagai, Hiromitsu Hoshino, Koshi Mimori, Fumiaki Tanaka, Hiroaki Nagano, Mitsugu Sekimoto, Yuichiro Doki, and Masaki Mori
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 40–45. Published online 2009 December 29. doi: 10.1073/pnas.0912407107.
PMCID: PMC2806714
| Free in PMC on 2010/07/05 |
Regulation of NF-κB by NSD1/FBXL11-dependent reversible lysine methylation of p65
Tao Lu, Mark W. Jackson, Benlian Wang, Maojing Yang, Mark R. Chance, Masaru Miyagi, Andrei V. Gudkov, and George R. Stark
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 46–51. Published online 2009 December 29. doi: 10.1073/pnas.0912493107.
PMCID: PMC2806709
JNK-mediated turnover and stabilization of the transcription factor p45/NF-E2 during differentiation of murine erythroleukemia cells
Tung-Liang Lee, Yu-Chiau Shyu, Pang-Hung Hsu, Chiung-Wen Chang, Shau-Ching Wen, Wei-Yuan Hsiao, Ming-Daw Tsai, and Che-Kun James Shen
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 52–57. Published online 2009 December 29. doi: 10.1073/pnas.0909153107.
PMCID: PMC2806728
| Free in PMC on 2010/07/05 |
Phosphorylation by Cdk2 is required for Myc to repress Ras-induced senescence in cotransformation
Per Hydbring, Fuad Bahram, Yingtao Su, Susanna Tronnersjö, Kari Högstrand, Natalie von der Lehr, Hamid Reza Sharifi, Richard Lilischkis, Nadine Hein, Siqin Wu, Jörg Vervoorts, Marie Henriksson, Alf Grandien, Bernhard Lüscher, and Lars-Gunnar Larsson
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 58–63. Published online 2009 December 29. doi: 10.1073/pnas.0900121106.
PMCID: PMC2806698
Recombination-induced tag exchange to track old and new proteins
Kitty F. Verzijlbergen, Victoria Menendez-Benito, Tibor van Welsem, Sjoerd J. van Deventer, Derek L. Lindstrom, Huib Ovaa, Jacques Neefjes, Daniel E. Gottschling, and Fred van Leeuwen
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 64–68. Published online 2009 December 29. doi: 10.1073/pnas.0911164107.
PMCID: PMC2806724
| Free in PMC on 2010/07/05 |
A genomewide study identifies the Wnt signaling pathway as a major target of p53 in murine embryonic stem cells
Kyoung-Hwa Lee, Mangmang Li, Aleksandra M. Michalowski, Xinyue Zhang, Hongling Liao, Lingyi Chen, Yang Xu, Xiaolin Wu, and Jing Huang
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 69–74. Published online 2009 December 29. doi: 10.1073/pnas.0909734107.
PMCID: PMC2806696
| Free in PMC on 2010/07/05 |
Developmental Biology
Isolation and characterization of centroacinar/terminal ductal progenitor cells in adult mouse pancreas
Meritxell Rovira, Sherri-Gae Scott, Andrew S. Liss, Jan Jensen, Sarah P. Thayer, and Steven D. Leach
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 75–80. Published online 2009 December 29. doi: 10.1073/pnas.0912589107.
PMCID: PMC2806716
| Free in PMC on 2010/07/05 |
The γ isoform of CaM kinase II controls mouse egg activation by regulating cell cycle resumption
Johannes Backs, Paula Stein, Thea Backs, Francesca E. Duncan, Chad E. Grueter, John McAnally, Xiaoxia Qi, Richard M. Schultz, and Eric N. Olson
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 81–86. Published online 2009 December 29. doi: 10.1073/pnas.0912658106.
PMCID: PMC2806780
| Free in PMC on 2010/07/05 |
miRNA-processing enzyme Dicer is necessary for cardiac outflow tract alignment and chamber septation
Ankur Saxena and Clifford J. Tabin
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 87–91. Published online 2009 December 29. doi: 10.1073/pnas.0912870107.
PMCID: PMC2806718
| Free in PMC on 2010/07/05 |
A role for suppressed incisor cuspal morphogenesis in the evolution of mammalian heterodont dentition
Atsushi Ohazama, James Blackburn, Thantrira Porntaveetus, Masato S. Ota, Hong Y. Choi, Eric B. Johnson, Philip Myers, Shelly Oommen, Kazuhiro Eto, John A. Kessler, Takashi Kondo, Gareth J. Fraser, J. Todd Streelman, Ulyses F. J. Pardiñas, Abigail S. Tucker, Pablo E. Ortiz, Cyril Charles, Laurent Viriot, Joachim Herz, and Paul T. Sharpe
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 92–97. Published online 2009 December 29. doi: 10.1073/pnas.0907236107.
PMCID: PMC2806730
A FOXA1-binding enhancer regulates Hoxb13 expression in the prostate gland
Ryan P. McMullin, Albert Dobi, Laura N. Mutton, András Orosz, Shilpi Maheshwari, Cooduvalli S. Shashikant, and Charles J. Bieberich
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 98–103. Published online 2009 December 29. doi: 10.1073/pnas.0902001107.
PMCID: PMC2806740
| Free in PMC on 2010/07/05 |
A muscle-specific transgenic reporter line of the sea anemone, Nematostella vectensis
Eduard Renfer, Annette Amon-Hassenzahl, Patrick R. H. Steinmetz, and Ulrich Technau
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 104–108. Published online 2009 December 29. doi: 10.1073/pnas.0909148107.
PMCID: PMC2806778
| Free in PMC on 2010/07/05 |
Somatic tetraploidy in specific chick retinal ganglion cells induced by nerve growth factor
Sandra M. Morillo, Pedro Escoll, Antonio de la Hera, and José M. Frade
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 109–114. Published online 2009 December 29. doi: 10.1073/pnas.0906121107.
PMCID: PMC2806721
| Free in PMC on 2010/07/05 |
Ecology
Large-scale patterns in biodiversity of microbial eukaryotes from the abyssal sea floor
Frank Scheckenbach, Klaus Hausmann, Claudia Wylezich, Markus Weitere, and Hartmut Arndt
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 115–120. Published online 2009 December 29. doi: 10.1073/pnas.0908816106.
PMCID: PMC2806785
| Free in PMC on 2010/07/05 |
Long-term nutrient enrichment decouples predator and prey production
John M. Davis, Amy D. Rosemond, Susan L. Eggert, Wyatt F. Cross, and J. Bruce Wallace
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 121–126. Published online 2009 December 29. doi: 10.1073/pnas.0908497107.
PMCID: PMC2806763
| Free in PMC on 2010/07/05 |
Evolution
Network analyses structure genetic diversity in independent genetic worlds
Sébastien Halary, Jessica W. Leigh, Bachar Cheaib, Philippe Lopez, and Eric Bapteste
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 127–132. Published online 2009 December 29. doi: 10.1073/pnas.0908978107.
PMCID: PMC2806761
Whole-proteome phylogeny of prokaryotes by feature frequency profiles: An alignment-free method with optimal feature resolution
Se-Ran Jun, Gregory E. Sims, Guohong A. Wu, and Sung-Hou Kim
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 133–138. Published online 2009 December 29. doi: 10.1073/pnas.0913033107.
PMCID: PMC2806744
| Free in PMC on 2010/07/05 |
Genetics
Sequencing newly replicated DNA reveals widespread plasticity in human replication timing
R. Scott Hansen, Sean Thomas, Richard Sandstrom, Theresa K. Canfield, Robert E. Thurman, Molly Weaver, Michael O. Dorschner, Stanley M. Gartler, and John A. Stamatoyannopoulos
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 139–144. Published online 2009 December 29. doi: 10.1073/pnas.0912402107.
PMCID: PMC2806781
A β-catenin/TCF-coordinated chromatin loop at MYC integrates 5′ and 3′ Wnt responsive enhancers
Gregory S. Yochum, Colette M. Sherrick, Mary MacPartlin, and Richard H. Goodman
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 145–150. Published online 2009 December 29. doi: 10.1073/pnas.0912294107.
PMCID: PMC2806753
| Free in PMC on 2010/07/05 |
Diversity and evolution of 11 innate immune genes in Bos taurus taurus and Bos taurus indicus cattle
Christopher M. Seabury, Paul M. Seabury, Jared E. Decker, Robert D. Schnabel, Jeremy F. Taylor, and James E. Womack
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 151–156. Published online 2009 December 29. doi: 10.1073/pnas.0913006107.
PMCID: PMC2806759
A cancer-associated DNA polymerase δ variant modeled in yeast causes a catastrophic increase in genomic instability
Danielle L. Daee, Tony M. Mertz, and Polina V. Shcherbakova
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 157–162. Published online 2009 December 29. doi: 10.1073/pnas.0907526106.
PMCID: PMC2806701
| Free in PMC on 2010/07/05 |
Gatekeeper residues in the major curlin subunit modulate bacterial amyloid fiber biogenesis
Xuan Wang, Yizhou Zhou, Juan-Jie Ren, Neal D. Hammer, and Matthew R. Chapman
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 163–168. Published online 2009 December 29. doi: 10.1073/pnas.0908714107.
PMCID: PMC2806774
| Free in PMC on 2010/07/05 |
Polycomb Repressive Complex 2 and Trithorax modulate Drosophila longevity and stress resistance
Alex P. Siebold, Rakhee Banerjee, Feng Tie, Daniel L. Kiss, Jacob Moskowitz, and Peter J. Harte
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 169–174. Published online 2009 December 29. doi: 10.1073/pnas.0907739107.
PMCID: PMC2806727
| Free in PMC on 2010/07/05 |
Building biological memory by linking positive feedback loops
Dong-Eun Chang, Shelly Leung, Mariette R. Atkinson, Aaron Reifler, Daniel Forger, and Alexander J. Ninfa
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 175–180. Published online 2009 December 29. doi: 10.1073/pnas.0908314107.
PMCID: PMC2806707
Immunology
Autoreactivity in an HIV-1 broadly reactive neutralizing antibody variable region heavy chain induces immunologic tolerance
Laurent Verkoczy, Marilyn Diaz, T. Matt Holl, Ying-Bin Ouyang, Hilary Bouton-Verville, S. Munir Alam, Hua-Xin Liao, Garnett Kelsoe, and Barton F. Haynes
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 181–186. Published online 2009 December 29. doi: 10.1073/pnas.0912914107.
PMCID: PMC2806760
| Free in PMC on 2010/07/05 |
Role of the translocation partner in protection against AID-dependent chromosomal translocations
Mila Jankovic, Davide F. Robbiani, Yair Dorsett, Thomas Eisenreich, Yang Xu, Alexander Tarakhovsky, Andre Nussenzweig, and Michel C. Nussenzweig
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 187–192. Published online 2009 December 29. doi: 10.1073/pnas.0908946107.
PMCID: PMC2806756
CD4+ T cell regulation of CD25 expression controls development of short-lived effector CD8+ T cells in primary and secondary responses
Joshua J. Obar, Michael J. Molloy, Evan R. Jellison, Thomas A. Stoklasek, Weijun Zhang, Edward J. Usherwood, and Leo Lefrançois
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 193–198. Published online 2009 December 29. doi: 10.1073/pnas.0909945107.
PMCID: PMC2806751
FoxP3+ regulatory T cells essentially contribute to peripheral CD8+ T-cell tolerance induced by steady-state dendritic cells
Anita Schildknecht, Sabine Brauer, Corinne Brenner, Katharina Lahl, Hansjörg Schild, Tim Sparwasser, Hans Christian Probst, and Maries van den Broek
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 199–203. Published online 2009 December 15. doi: 10.1073/pnas.0910620107.
PMCID: PMC2806715
| Free in PMC on 2010/07/05 |
Homeostatic imbalance of regulatory and effector T cells due to IL-2 deprivation amplifies murine lupus
Jens Y. Humrich, Henner Morbach, Reinmar Undeutsch, Philipp Enghard, Stefan Rosenberger, Olivia Weigert, Lutz Kloke, Juliane Heimann, Timo Gaber, Susan Brandenburg, Alexander Scheffold, Jochen Huehn, Andreas Radbruch, Gerd-Rüdiger Burmester, and Gabriela Riemekasten
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 204–209. Published online 2009 December 29. doi: 10.1073/pnas.0903158107.
PMCID: PMC2806746
| Free in PMC on 2010/07/05 |
T-cell antagonism by short half-life pMHC ligands can be mediated by an efficient trapping of T-cell polarization toward the APC
Leandro J. Carreño, Erick M. Riquelme, Pablo A. González, Nicolas Espagnolle, Claudia A. Riedel, Salvatore Valitutti, and Alexis M. Kalergis
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 210–215. Published online 2009 December 29. doi: 10.1073/pnas.0911258107.
PMCID: PMC2806700
| Free in PMC on 2010/07/05 |
Effective collaboration between marginal metallophilic macrophages and CD8+ dendritic cells in the generation of cytotoxic T cells
Ronald Backer, Timo Schwandt, Mascha Greuter, Marije Oosting, Frank Jüngerkes, Thomas Tüting, Louis Boon, Tom O’Toole, Georg Kraal, Andreas Limmer, and Joke M. M. den Haan
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 216–221. Published online 2009 December 29. doi: 10.1073/pnas.0909541107.
PMCID: PMC2806720
| Free in PMC on 2010/07/05 |
Medical Sciences
Involvement of the Toll-like receptor 4 pathway and use of TNF-α antagonists for treatment of the mucopolysaccharidoses
Calogera M. Simonaro, Yi Ge, Efrat Eliyahu, Xingxuan He, Karl J. Jepsen, and Edward H. Schuchman
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 222–227. Published online 2009 December 29. doi: 10.1073/pnas.0912937107.
PMCID: PMC2806747
The bacterial signal indole increases epithelial-cell tight-junction resistance and attenuates indicators of inflammation
Tarun Bansal, Robert C. Alaniz, Thomas K. Wood, and Arul Jayaraman
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 228–233. Published online 2009 December 29. doi: 10.1073/pnas.0906112107.
PMCID: PMC2806735
| Free in PMC on 2010/07/05 |
DNA methylation of developmental genes in pediatric medulloblastomas identified by denaturation analysis of methylation differences
Scott J. Diede, Jamie Guenthoer, Linda N. Geng, Sarah E. Mahoney, Michael Marotta, James M. Olson, Hisashi Tanaka, and Stephen J. Tapscott
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 234–239. Published online 2009 December 29. doi: 10.1073/pnas.0907606106.
PMCID: PMC2806770
| Free in PMC on 2010/07/05 |
Inflammation and adipose tissue macrophages in lipodystrophic mice
Laura Herrero, Hagit Shapiro, Ali Nayer, Jongsoon Lee, and Steven E. Shoelson
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 240–245. Published online 2009 December 29. doi: 10.1073/pnas.0905310107.
PMCID: PMC2806777
| Free in PMC on 2010/07/05 |
Mutant p53 drives metastasis and overcomes growth arrest/senescence in pancreatic cancer
Jennifer P. Morton, Paul Timpson, Saadia A. Karim, Rachel A. Ridgway, Dimitris Athineos, Brendan Doyle, Nigel B. Jamieson, Karin A. Oien, Andrew M. Lowy, Valerie G. Brunton, Margaret C. Frame, T. R. Jeffry Evans, and Owen J. Sansom
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 246–251. Published online 2010 December 29. doi: 10.1073/pnas.0908428107.
PMCID: PMC2806749
| Free in PMC on 2010/07/05 |
Functional screening identifies CRLF2 in precursor B-cell acute lymphoblastic leukemia
Akinori Yoda, Yuka Yoda, Sabina Chiaretti, Michal Bar-Natan, Kartik Mani, Scott J. Rodig, Nathan West, Yun Xiao, Jennifer R. Brown, Constantine Mitsiades, Martin Sattler, Jeffrey L. Kutok, Daniel J. DeAngelo, Martha Wadleigh, Alfonso Piciocchi, Paola Dal Cin, James E. Bradner, James D. Griffin, Kenneth C. Anderson, Richard M. Stone, Jerome Ritz, Robin Foà, Jon C. Aster, David A. Frank, and David M. Weinstock
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 252–257. Published online 2009 December 29. doi: 10.1073/pnas.0911726107.
PMCID: PMC2806782
| Free in PMC on 2010/07/05 |
Homozygous frameshift mutation in TMCO1 causes a syndrome with craniofacial dysmorphism, skeletal anomalies, and mental retardation
Baozhong Xin, Erik G. Puffenberger, Susan Turben, Haiyan Tan, Aimin Zhou, and Heng Wang
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 258–263. Published online 2009 December 29. doi: 10.1073/pnas.0908457107.
PMCID: PMC2806776
| Free in PMC on 2010/07/05 |
miR-221 overexpression contributes to liver tumorigenesis
Pascal Pineau, Stefano Volinia, Katherine McJunkin, Agnès Marchio, Carlo Battiston, Benoît Terris, Vincenzo Mazzaferro, Scott W. Lowe, Carlo M. Croce, and Anne Dejean
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 264–269. Published online 2009 December 29. doi: 10.1073/pnas.0907904107.
PMCID: PMC2806773
Stochastic fate of p53-mutant epidermal progenitor cells is tilted toward proliferation by UV B during preneoplasia
Allon M. Klein, Douglas E. Brash, Philip H. Jones, and Benjamin D. Simons
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 270–275. Published online 2009 December 29. doi: 10.1073/pnas.0909738107.
PMCID: PMC2806764
| Free in PMC on 2010/07/05 |
Microbiology
A protein secretion system linked to bacteroidete gliding motility and pathogenesis
Keiko Sato, Mariko Naito, Hideharu Yukitake, Hideki Hirakawa, Mikio Shoji, Mark J. McBride, Ryan G. Rhodes, and Koji Nakayama
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 276–281. Published online 2009 December 29. doi: 10.1073/pnas.0912010107.
PMCID: PMC2806738
| Free in PMC on 2010/07/05 |
Functions of the unique N-terminal region of glycoprotein E in the pathogenesis of varicella-zoster virus infection
Barbara Berarducci, Jaya Rajamani, Leigh Zerboni, Xibing Che, Marvin Sommer, and Ann M. Arvin
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 282–287. Published online 2009 December 29. doi: 10.1073/pnas.0912373107.
PMCID: PMC2806775
| Free in PMC on 2010/07/05 |
The upper surface of an Escherichia coli swarm is stationary
Rongjing Zhang, Linda Turner, and Howard C. Berg
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 288–290. Published online 2009 December 29. doi: 10.1073/pnas.0912804107.
PMCID: PMC2806745
Unbiased probing of the entire hepatitis C virus life cycle identifies clinical compounds that target multiple aspects of the infection
Pablo Gastaminza, Christina Whitten-Bauer, and Francis V. Chisari
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 291–296. Published online 2009 December 29. doi: 10.1073/pnas.0912966107.
PMCID: PMC2806752
| Free in PMC on 2010/07/05 |
Inhibition of bacterial disulfide bond formation by the anticoagulant warfarin
Rachel J. Dutton, April Wayman, Jun-Rong Wei, Eric J. Rubin, Jon Beckwith, and Dana Boyd
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 297–301. Published online 2009 December 29. doi: 10.1073/pnas.0912952107.
PMCID: PMC2806739
| Free in PMC on 2010/07/05 |
Sinorhizobium meliloti phospholipase C required for lipid remodeling during phosphorus limitation
Maritza Zavaleta-Pastor, Christian Sohlenkamp, Jun-Lian Gao, Ziqiang Guan, Rahat Zaheer, Turlough M. Finan, Christian R. H. Raetz, Isabel M. López-Lara, and Otto Geiger
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 302–307. Published online 2009 December 29. doi: 10.1073/pnas.0912930107.
PMCID: PMC2806695
| Free in PMC on 2010/07/05 |
Binding of a potent small-molecule inhibitor of six-helix bundle formation requires interactions with both heptad-repeats of the RSV fusion protein
Dirk Roymans, Hendrik L. De Bondt, Eric Arnoult, Peggy Geluykens, Tom Gevers, Marcia Van Ginderen, Nick Verheyen, Hidong Kim, Rudy Willebrords, Jean-François Bonfanti, Wouter Bruinzeel, Maxwell D. Cummings, Herman van Vlijmen, and Koen Andries
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 308–313. Published online 2009 December 29. doi: 10.1073/pnas.0910108106.
PMCID: PMC2806771
| Free in PMC on 2010/07/05 |
Ebolavirus VP35 uses a bimodal strategy to bind dsRNA for innate immune suppression
Christopher R. Kimberlin, Zachary A. Bornholdt, Sheng Li, Virgil L. Woods, Jr., Ian J. MacRae, and Erica Ollmann Saphire
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 314–319. Published online 2009 December 29. doi: 10.1073/pnas.0910547107.
PMCID: PMC2806767
| Free in PMC on 2010/07/05 |
Pulmonary surfactant phosphatidylglycerol inhibits respiratory syncytial virus–induced inflammation and infection
Mari Numata, Hong Wei Chu, Azzeddine Dakhama, and Dennis R. Voelker
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 320–325. Published online 2009 December 29. doi: 10.1073/pnas.0909361107.
PMCID: PMC2806703
| Free in PMC on 2010/07/05 |
Electrokinesis is a microbial behavior that requires extracellular electron transport
H. W. Harris, M. Y. El-Naggar, O. Bretschger, M. J. Ward, M. F. Romine, A. Y. Obraztsova, and K. H. Nealson
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 326–331. Published online 2009 December 29. doi: 10.1073/pnas.0907468107.
PMCID: PMC2806741
| Free in PMC on 2010/07/05 |
Neuroscience
TRPM1 is a component of the retinal ON bipolar cell transduction channel in the mGluR6 cascade
Chieko Koike, Takehisa Obara, Yoshitsugu Uriu, Tomohiro Numata, Rikako Sanuki, Kentarou Miyata, Toshiyuki Koyasu, Shinji Ueno, Kazuo Funabiki, Akiko Tani, Hiroshi Ueda, Mineo Kondo, Yasuo Mori, Masao Tachibana, and Takahisa Furukawa
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 332–337. Published online 2009 December 29. doi: 10.1073/pnas.0912730107.
PMCID: PMC2806705
A nonsynaptic mechanism underlying interictal discharges in human epileptic neocortex
Anita K. Roopun, Jennifer D. Simonotto, Michelle L. Pierce, Alistair Jenkins, Claire Nicholson, Ian S. Schofield, Roger G. Whittaker, Marcus Kaiser, Miles A. Whittington, Roger D. Traub, and Mark O. Cunningham
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 338–343. Published online 2009 December 29. doi: 10.1073/pnas.0912652107.
PMCID: PMC2806783
| Free in PMC on 2010/07/05 |
A demonstration that the hippocampus supports both recollection and familiarity
C. Brock Kirwan, John T. Wixted, and Larry R. Squire
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 344–348. Published online 2009 December 29. doi: 10.1073/pnas.0912543107.
PMCID: PMC2806702
| Free in PMC on 2010/07/05 |
Delayed wave of c-Fos expression in the dorsal hippocampus involved specifically in persistence of long-term memory storage
Cynthia Katche, Pedro Bekinschtein, Leandro Slipczuk, Andrea Goldin, Ivan A. Izquierdo, Martin Cammarota, and Jorge H. Medina
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 349–354. Published online 2009 December 29. doi: 10.1073/pnas.0912931107.
PMCID: PMC2806699
| Free in PMC on 2010/07/05 |
Prestimulus functional connectivity determines pain perception in humans
Markus Ploner, Michael C. Lee, Katja Wiech, Ulrike Bingel, and Irene Tracey
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 355–360. Published online 2009 December 29. doi: 10.1073/pnas.0906186106.
PMCID: PMC2806712
| Free in PMC on 2010/07/05 |
A backward progression of attentional effects in the ventral stream
Elizabeth A. Buffalo, Pascal Fries, Rogier Landman, Hualou Liang, and Robert Desimone
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 361–365. Published online 2009 December 29. doi: 10.1073/pnas.0907658106.
PMCID: PMC2806732
| Free in PMC on 2010/07/05 |
Dietary branched chain amino acids ameliorate injury-induced cognitive impairment
Jeffrey T. Cole, Christina M. Mitala, Suhali Kundu, Ajay Verma, Jaclynn A. Elkind, Itzhak Nissim, and Akiva S. Cohen
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 366–371. Published online 2009 December 29. doi: 10.1073/pnas.0910280107.
PMCID: PMC2806733
| Free in PMC on 2010/07/05 |
Topography and physiology of ascending streams in the auditory tectothalamic pathway
Charles C. Lee and S. Murray Sherman
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 372–377. Published online 2009 December 29. doi: 10.1073/pnas.0907873107.
PMCID: PMC2806784
| Free in PMC on 2010/07/05 |
PINK1-dependent recruitment of Parkin to mitochondria in mitophagy
Cristofol Vives-Bauza, Chun Zhou, Yong Huang, Mei Cui, Rosa L.A. de Vries, Jiho Kim, Jessica May, Maja Aleksandra Tocilescu, Wencheng Liu, Han Seok Ko, Jordi Magrané, Darren J. Moore, Valina L. Dawson, Regis Grailhe, Ted M. Dawson, Chenjian Li, Kim Tieu, and Serge Przedborski
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 378–383. Published online 2009 December 29. doi: 10.1073/pnas.0911187107.
PMCID: PMC2806779
| Free in PMC on 2010/07/05 |
Sex-dependent association of common variants of microcephaly genes with brain structure
Lars M. Rimol, Ingrid Agartz, Srdjan Djurovic, Andrew A. Brown, J. Cooper Roddey, Anna K. Kähler, Morten Mattingsdal, Lavinia Athanasiu, Alexander H. Joyner, Nicholas J. Schork, Eric Halgren, Kjetil Sundet, Ingrid Melle, Anders M. Dale, Ole A. Andreassen, and for the Alzheimer's Disease Neuroimaging Initiative
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 384–388. Published online 2009 December 29. doi: 10.1073/pnas.0908454107.
PMCID: PMC2806758
| Free in PMC on 2010/07/05 |
VGLUT2 in dopamine neurons is required for psychostimulant-induced behavioral activation
Carolina Birgner, Karin Nordenankar, Martin Lundblad, José Alfredo Mendez, Casey Smith, Madeleine le Grevès, Dagmar Galter, Lars Olson, Anders Fredriksson, Louis-Eric Trudeau, Klas Kullander, and Åsa Wallén-Mackenzie
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 389–394. Published online 2009 December 29. doi: 10.1073/pnas.0910986107.
PMCID: PMC2806710
Direct rod input to cone BCs and direct cone input to rod BCs challenge the traditional view of mammalian BC circuitry
Ji-Jie Pang, Fan Gao, Janis Lem, Debra E. Bramblett, David L. Paul, and Samuel M. Wu
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 395–400. Published online 2009 December 29. doi: 10.1073/pnas.0907178107.
PMCID: PMC2806755
| Free in PMC on 2010/07/05 |
Recognition memory signals in the macaque hippocampus
Michael J. Jutras and Elizabeth A. Buffalo
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 401–406. Published online 2009 December 29. doi: 10.1073/pnas.0908378107.
PMCID: PMC2806723
| Free in PMC on 2010/07/05 |
Pharmacology
Isolated C-terminal tail of FGF23 alleviates hypophosphatemia by inhibiting FGF23-FGFR-Klotho complex formation
Regina Goetz, Yuji Nakada, Ming Chang Hu, Hiroshi Kurosu, Lei Wang, Teruyo Nakatani, Mingjun Shi, Anna V. Eliseenkova, Mohammed S. Razzaque, Orson W. Moe, Makoto Kuro-o, and Moosa Mohammadi
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 407–412. Published online 2009 December 29. doi: 10.1073/pnas.0902006107.
PMCID: PMC2806769
| Free in PMC on 2010/07/05 |
Identification of a small-molecule inhibitor of the PICK1 PDZ domain that inhibits hippocampal LTP and LTD
Thor S. Thorsen, Kenneth L. Madsen, Nelson Rebola, Mette Rathje, Victor Anggono, Anders Bach, Irina S. Moreira, Nicolai Stuhr-Hansen, Tino Dyhring, Dan Peters, Thijs Beuming, Richard Huganir, Harel Weinstein, Christophe Mulle, Kristian Strømgaard, Lars Christian B. Rønn, and Ulrik Gether
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 413–418. Published online 2009 November 29. doi: 10.1073/pnas.0902225107.
PMCID: PMC2806717
| Free in PMC on 2010/07/05 |
Physiology
Optimal hematocrit for maximal exercise performance in acute and chronic erythropoietin-treated mice
Beat Schuler, Margarete Arras, Stephan Keller, Andreas Rettich, Carsten Lundby, Johannes Vogel, and Max Gassmann
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 419–423. Published online 2009 December 29. doi: 10.1073/pnas.0912924107.
PMCID: PMC2806754
Phosphorylation of aquaporin-2 regulates its endocytosis and protein–protein interactions
Hanne B. Moeller, Jeppe Praetorius, Michael R. Rützler, and Robert A. Fenton
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 424–429. Published online 2009 December 29. doi: 10.1073/pnas.0910683107.
PMCID: PMC2806726
| Free in PMC on 2010/07/05 |
Myosin ATP turnover rate is a mechanism involved in thermogenesis in resting skeletal muscle fibers
Melanie A. Stewart, Kathleen Franks-Skiba, Susan Chen, and Roger Cooke
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 430–435. Published online 2009 December 29. doi: 10.1073/pnas.0909468107.
PMCID: PMC2806748
NCLX is an essential component of mitochondrial Na+/Ca2+ exchange
Raz Palty, William F. Silverman, Michal Hershfinkel, Teresa Caporale, Stefano L. Sensi, Julia Parnis, Christiane Nolte, Daniel Fishman, Varda Shoshan-Barmatz, Sharon Herrmann, Daniel Khananshvili, and Israel Sekler
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 436–441. Published online 2009 December 29. doi: 10.1073/pnas.0908099107.
PMCID: PMC2806722
| Free in PMC on 2010/07/05 |
Bicarbonate-sensing soluble adenylyl cyclase is an essential sensor for acid/base homeostasis
Martin Tresguerres, Scott K. Parks, Eric Salazar, Lonny R. Levin, Greg G. Goss, and Jochen Buck
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 442–447. Published online 2009 December 29. doi: 10.1073/pnas.0911790107.
PMCID: PMC2806762
| Free in PMC on 2010/07/05 |
Impact of oral bisphenol A at reference doses on intestinal barrier function and sex differences after perinatal exposure in rats
Viorica Braniste, Aurore Jouault, Eric Gaultier, Arnaud Polizzi, Claire Buisson-Brenac, Mathilde Leveque, Pascal G. Martin, Vassilia Theodorou, Jean Fioramonti, and Eric Houdeau
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 448–453. Published online 2009 December 29. doi: 10.1073/pnas.0907697107.
PMCID: PMC2806743
| Free in PMC on 2010/07/05 |
Probiotics promote gut health through stimulation of epithelial innate immunity
Cristiano Pagnini, Rubina Saeed, Giorgos Bamias, Kristen O. Arseneau, Theresa T. Pizarro, and Fabio Cominelli
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 454–459. Published online 2009 December 29. doi: 10.1073/pnas.0910307107.
PMCID: PMC2806692
Plant Biology
Laser microdissection of Arabidopsis cells at the powdery mildew infection site reveals site-specific processes and regulators
Divya Chandran, Noriko Inada, Greg Hather, Christiane K. Kleindt, and Mary C. Wildermuth
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 460–465. Published online 2009 December 29. doi: 10.1073/pnas.0912492107.
PMCID: PMC2806765
Identification of MIR390a precursor processing-defective mutants in Arabidopsis by direct genome sequencing
Josh T. Cuperus, Taiowa A. Montgomery, Noah Fahlgren, Russell T. Burke, Tiffany Townsend, Christopher M. Sullivan, and James C. Carrington
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 466–471. Published online 2009 December 29. doi: 10.1073/pnas.0913203107.
PMCID: PMC2806713
| Free in PMC on 2010/07/05 |
Angiosperm genome comparisons reveal early polyploidy in the monocot lineage
Haibao Tang, John E. Bowers, Xiyin Wang, and Andrew H. Paterson
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 472–477. Published online 2009 December 29. doi: 10.1073/pnas.0908007107.
PMCID: PMC2806719
| Free in PMC on 2010/07/05 |
Plant flotillins are required for infection by nitrogen-fixing bacteria
Cara H. Haney and Sharon R. Long
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 478–483. Published online 2009 November 27. doi: 10.1073/pnas.0910081107.
PMCID: PMC2806772
RNAi-mediated viral immunity requires amplification of virus-derived siRNAs in Arabidopsis thaliana
Xian-Bing Wang, Qingfa Wu, Takao Ito, Fabrizio Cillo, Wan-Xiang Li, Xuemei Chen, Jia-Lin Yu, and Shou-Wei Ding
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 484–489. Published online 2009 December 29. doi: 10.1073/pnas.0904086107.
PMCID: PMC2806737
Cleistogamous flowering in barley arises from the suppression of microRNA-guided HvAP2 mRNA cleavage
Sudha K. Nair, Ning Wang, Yerlan Turuspekov, Mohammad Pourkheirandish, Suphawat Sinsuwongwat, Guoxiong Chen, Mohammad Sameri, Akemi Tagiri, Ichiro Honda, Yoshiaki Watanabe, Hiroyuki Kanamori, Thomas Wicker, Nils Stein, Yoshiaki Nagamura, Takashi Matsumoto, and Takao Komatsuda
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 490–495. Published online 2009 December 29. doi: 10.1073/pnas.0909097107.
PMCID: PMC2806734
A receptor-like cytoplasmic kinase, BIK1, associates with a flagellin receptor complex to initiate plant innate immunity
Dongping Lu, Shujing Wu, Xiquan Gao, Yulan Zhang, Libo Shan, and Ping He
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 496–501. Published online 2009 December 29. doi: 10.1073/pnas.0909705107.
PMCID: PMC2806711
| Free in PMC on 2010/07/05 |
Chloroplast acetyl-CoA carboxylase activity is 2-oxoglutarate–regulated by interaction of PII with the biotin carboxyl carrier subunit
Ana Belen Feria Bourrellier, Benoit Valot, Alain Guillot, Françoise Ambard-Bretteville, Jean Vidal, and Michael Hodges
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 502–507. Published online 2009 December 29. doi: 10.1073/pnas.0910097107.
PMCID: PMC2806706
| Free in PMC on 2010/07/05 |
Psychological and Cognitive Sciences
Context-dependent utility overrides absolute memory as a determinant of choice
Lorena Pompilio and Alex Kacelnik
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 508–512. Published online 2009 December 29. doi: 10.1073/pnas.0907250107.
PMCID: PMC2806750
| Free in PMC on 2010/07/05 |
Social Sciences
Economic Sciences
On implementing maximum economic yield in commercial fisheries
C. M. Dichmont, S. Pascoe, T. Kompas, A. E. Punt, and R. Deng
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 16–21. Published online 2009 December 29. doi: 10.1073/pnas.0912091107.
PMCID: PMC2806725
| Free in PMC on 2010/07/05 |
Corrections
Correction for Graham et. al., Phylogenetic structure in tropical hummingbird communities
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 513. Published online 2009 December 29. doi: 10.1073/pnas.0912879107.
PMCID: PMC2806729
Corrects: Catherine H. Graham, et al. Phylogenetic structure in tropical hummingbird communities. Proc Natl Acad Sci U S A. 2009 November 17; 106(Supplement_2): 19673–19678.
Correction for Raymundo et.al., Functionally diverse reef-fish communities ameliorate coral disease
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 513. Published online 2009 December 29. doi: 10.1073/pnas.0913173107.
PMCID: PMC2806693
Corrects: Laurie J. Raymundo, et al. Functionally diverse reef-fish communities ameliorate coral disease. Proc Natl Acad Sci U S A. 2009 October 6; 106(40): 17067–17070.
Correction for Oh et. al., Fat location defines sensation
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 513. Published online 2009 December 29. doi: 10.1073/pnas.0913327107.
PMCID: PMC2806757
Corrects: Uhtaek Oh, et al. Fat location defines sensation. Proc Natl Acad Sci U S A. 2009 November 3; 106(44): 18435–18436.
Correction for Gottfried-Blackmore et. al., Acute in vivo exposure to interferon-γ enables resident brain dendritic cells to become effective antigen presenting cells
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 513. Published online 2009 December 29. doi: 10.1073/pnas.0913488107.
PMCID: PMC2806708
Corrects: Andres Gottfried-Blackmore, et al. Acute in vivo exposure to interferon-γ enables resident brain dendritic cells to become effective antigen presenting cells. Proc Natl Acad Sci U S A. 2009 December 8; 106(49): 20918–20923.
Correction for Sarkar et. al., Adenoviral transfer of HIF-1α enhances vascular responses to critical limb ischemia in diabetic mice
Proc Natl Acad Sci U S A. 2010 January 5; 107(1): 514. Published online 2009 December 29. doi: 10.1073/pnas.0913116107.
PMCID: PMC2806704
Corrects: Kakali Sarkar, et al. Adenoviral transfer of HIF-1α enhances vascular responses to critical limb ischemia in diabetic mice. Proc Natl Acad Sci U S A. 2009 November 3; 106(44): 18769–18774.
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