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Volume 111(37);  September 16, 2014

Articles from this journal are usually available in PMC after a 6-month delay (embargo). Some articles may be available sooner.

This Week in PNAS

In This Issue
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13243–13244. Published online Sep 16, 2014. doi: 10.1073/iti3714111
PMCID:
PMC4169904

Letters

Importance of climate-driven forest–savanna biome shifts in anthropological and ecological research
Lucas C. R. Silva
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3831–E3832. Published online Aug 26, 2014. doi: 10.1073/pnas.1413205111
PMCID:
PMC4169923
Reply to Silva: Dynamic human–vegetation–climate interactions at forest ecotones during the late-Holocene in lowland South America
John Francis Carson, Bronwen S. Whitney, Francis E. Mayle, José Iriarte, Heiko Prümers, J. Daniel Soto, Jennifer Watling
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3833. Published online Aug 26, 2014. doi: 10.1073/pnas.1413867111
PMCID:
PMC4169918
Statistics show no evidence of gender bias in the public's hurricane preparedness
Steve Maley
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3834. Published online Aug 26, 2014. doi: 10.1073/pnas.1413079111
PMCID:
PMC4169919
Reply to Maley: Yes, appropriate modeling of fatality counts confirms female hurricanes are deadlier
Kiju Jung, Sharon Shavitt, Madhu Viswanathan, Joseph M. Hilbe
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3835. Published online Aug 26, 2014. doi: 10.1073/pnas.1414111111
PMCID:
PMC4169924

Science and Culture

Stephen Ornes
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13245. Published online Sep 16, 2014. doi: 10.1073/pnas.1413975111
PMCID:
PMC4169912

Profile

Profile of William R. Jacobs, Jr.
Ann Griswold
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13246–13248. Published online Sep 2, 2014. doi: 10.1073/pnas.1407879111
PMCID:
PMC4169932

Commentaries

How to get into that “room at the bottom”
Henrik Flyvbjerg
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13249–13250. Published online Sep 3, 2014. doi: 10.1073/pnas.1414387111
PMCID:
PMC4169944
Stochastic variability in HIV affects viral eradication
Igor M. Rouzine, Brandon S. Razooky, Leor S. Weinberger
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13251–13252. Published online Sep 8, 2014. doi: 10.1073/pnas.1413362111
PMCID:
PMC4169906
Blood–brain biomarkers for stress susceptibility
Sumantra Chattarji, Rajnish P. Rao
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13253–13254. Published online Sep 3, 2014. doi: 10.1073/pnas.1414663111
PMCID:
PMC4169963

PNAS Plus Significance Statements

PNAS Plus Significance Statements
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13255–13256. Published online Sep 16, 2014. doi: 10.1073/pnas.ss11137
PMCID:
PMC4169913

PNAS Plus

Şahin Kaya Özdemir, Jiangang Zhu, Xu Yang, Bo Peng, Huzeyfe Yilmaz, Lina He, Faraz Monifi, Steven He Huang, Gui Lu Long, Lan Yang
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3836–E3844. Published online Sep 2, 2014. doi: 10.1073/pnas.1408283111
PMCID:
PMC4169974
Structural insight into the molecular mechanism of allosteric activation of human cystathionine β-synthase by S-adenosylmethionine
June Ereño-Orbea, Tomas Majtan, Iker Oyenarte, Jan P. Kraus, Luis Alfonso Martínez-Cruz
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3845–E3852. Published online Sep 2, 2014. doi: 10.1073/pnas.1414545111
PMCID:
PMC4169959
Remodeling of a delivery complex allows ClpS-mediated degradation of N-degron substrates
Izarys Rivera-Rivera, Giselle Román-Hernández, Robert T. Sauer, Tania A. Baker
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3853–E3859. Published online Sep 3, 2014. doi: 10.1073/pnas.1414933111
PMCID:
PMC4169940
Utilization of extracellular information before ligand-receptor binding reaches equilibrium expands and shifts the input dynamic range
Alejandra C. Ventura, Alan Bush, Gustavo Vasen, Matías A. Goldín, Brianne Burkinshaw, Nirveek Bhattacharjee, Albert Folch, Roger Brent, Ariel Chernomoretz, Alejandro Colman-Lerner
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3860–E3869. Published online Aug 29, 2014. doi: 10.1073/pnas.1322761111
PMCID:
PMC4169960
TRPV6 calcium channel translocates to the plasma membrane via Orai1-mediated mechanism and controls cancer cell survival
Maylis Raphaël, V’yacheslav Lehen’kyi, Matthieu Vandenberghe, Benjamin Beck, Sergiy Khalimonchyk, Fabien Vanden Abeele, Leonardo Farsetti, Emmanuelle Germain, Alexandre Bokhobza, Adriana Mihalache, Pierre Gosset, Christoph Romanin, Philippe Clézardin, Roman Skryma, Natalia Prevarskaya
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3870–E3879. Published online Aug 29, 2014. doi: 10.1073/pnas.1413409111
PMCID:
PMC4169956
Controlled sumoylation of the mevalonate pathway enzyme HMGS-1 regulates metabolism during aging
Amir Sapir, Assaf Tsur, Thijs Koorman, Kaitlin Ching, Prashant Mishra, Annabelle Bardenheier, Lisa Podolsky, Ulrike Bening-Abu-Shach, Mike Boxem, Tsui-Fen Chou, Limor Broday, Paul W. Sternberg
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3880–E3889. Published online Sep 3, 2014. doi: 10.1073/pnas.1414748111
PMCID:
PMC4169931
Nup98 promotes antiviral gene expression to restrict RNA viral infection in Drosophila
Debasis Panda, Pau Pascual-Garcia, Margaret Dunagin, Matthew Tudor, Kaycie C. Hopkins, Jie Xu, Beth Gold, Arjun Raj, Maya Capelson, Sara Cherry
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3890–E3899. Published online Sep 2, 2014. doi: 10.1073/pnas.1410087111
PMCID:
PMC4169978
One severe acute respiratory syndrome coronavirus protein complex integrates processive RNA polymerase and exonuclease activities
Lorenzo Subissi, Clara C. Posthuma, Axelle Collet, Jessika C. Zevenhoven-Dobbe, Alexander E. Gorbalenya, Etienne Decroly, Eric J. Snijder, Bruno Canard, Isabelle Imbert
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3900–E3909. Published online Sep 2, 2014. doi: 10.1073/pnas.1323705111
PMCID:
PMC4169972
Xylella fastidiosa outer membrane vesicles modulate plant colonization by blocking attachment to surfaces
Michael Ionescu, Paulo A. Zaini, Clelia Baccari, Sophia Tran, Aline M. da Silva, Steven E. Lindow
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3910–E3918. Published online Sep 2, 2014. doi: 10.1073/pnas.1414944111
PMCID:
PMC4169949
Connexin hemichannels contribute to spontaneous electrical activity in the human fetal cortex
Anna R. Moore, Wen-Liang Zhou, Carissa L. Sirois, Glenn S. Belinsky, Nada Zecevic, Srdjan D. Antic
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3919–E3928. Published online Sep 2, 2014. doi: 10.1073/pnas.1405253111
PMCID:
PMC4169969
C-terminal domain small phosphatase 1 and MAP kinase reciprocally control REST stability and neuronal differentiation
Edmund Nesti, Glen M. Corson, Maxwell McCleskey, Jon A. Oyer, Gail Mandel
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3929–E3936. Published online Sep 2, 2014. doi: 10.1073/pnas.1414770111
PMCID:
PMC4169941
Mixtures of opposing phosphorylations within hexamers precisely time feedback in the cyanobacterial circadian clock
Jenny Lin, Justin Chew, Udaysankar Chockanathan, Michael J. Rust
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3937–E3945. Published online Sep 2, 2014. doi: 10.1073/pnas.1408692111
PMCID:
PMC4169968

Perspective

Does aquaculture add resilience to the global food system?
Max Troell, Rosamond L. Naylor, Marc Metian, Malcolm Beveridge, Peter H. Tyedmers, Carl Folke, Kenneth J. Arrow, Scott Barrett, Anne-Sophie Crépin, Paul R. Ehrlich, Åsa Gren, Nils Kautsky, Simon A. Levin, Karine Nyborg, Henrik Österblom, Stephen Polasky, Marten Scheffer, Brian H. Walker, Tasos Xepapadeas, Aart de Zeeuw
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13257–13263. Published online Aug 18, 2014. doi: 10.1073/pnas.1404067111
PMCID:
PMC4169979

Physical Sciences

Applied Mathematics

Stochastic variability in HIV affects viral eradication
Igor M. Rouzine, Brandon S. Razooky, Leor S. Weinberger
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13251–13252. Published online Sep 8, 2014. doi: 10.1073/pnas.1413362111
PMCID:
PMC4169906
Predicting the outcomes of treatment to eradicate the latent reservoir for HIV-1
Alison L. Hill, Daniel I. S. Rosenbloom, Feng Fu, Martin A. Nowak, Robert F. Siliciano
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13475–13480. Published online Aug 5, 2014. doi: 10.1073/pnas.1406663111
PMCID:
PMC4169952

Applied Physical Sciences

Ultrafast phase-change logic device driven by melting processes
Desmond Loke, Jonathan M. Skelton, Wei-Jie Wang, Tae-Hoon Lee, Rong Zhao, Tow-Chong Chong, Stephen R. Elliott
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13272–13277. Published online Sep 2, 2014. doi: 10.1073/pnas.1407633111
PMCID:
PMC4169905

Astronomy

Prospects for detecting oxygen, water, and chlorophyll on an exo-Earth
Timothy D. Brandt, David S. Spiegel
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13278–13283. Published online Sep 2, 2014. doi: 10.1073/pnas.1407296111
PMCID:
PMC4169953

Chemistry

Ellen J. Robertson, Gloria K. Oliver, Menglu Qian, Caroline Proulx, Ronald N. Zuckermann, Geraldine L. Richmond
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13284–13289. Published online Sep 2, 2014. doi: 10.1073/pnas.1414843111
PMCID:
PMC4169914

Computer Sciences

Paolo Santi, Giovanni Resta, Michael Szell, Stanislav Sobolevsky, Steven H. Strogatz, Carlo Ratti
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13290–13294. Published online Sep 2, 2014. doi: 10.1073/pnas.1403657111
PMCID:
PMC4169909
Luke Maurits, Thomas L. Griffiths
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13576–13581. Published online Sep 5, 2014. doi: 10.1073/pnas.1319042111
PMCID:
PMC4169967

Engineering

Vortical ciliary flows actively enhance mass transport in reef corals
Orr H. Shapiro, Vicente I. Fernandez, Melissa Garren, Jeffrey S. Guasto, François P. Debaillon-Vesque, Esti Kramarsky-Winter, Assaf Vardi, Roman Stocker
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13391–13396. Published online Sep 5, 2014. doi: 10.1073/pnas.1323094111
PMCID:
PMC4169935
Clearance of pathological antibodies using biomimetic nanoparticles
Jonathan A. Copp, Ronnie H. Fang, Brian T. Luk, Che-Ming J. Hu, Weiwei Gao, Kang Zhang, Liangfang Zhang
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13481–13486. Published online Sep 2, 2014. doi: 10.1073/pnas.1412420111
PMCID:
PMC4169917
Şahin Kaya Özdemir, Jiangang Zhu, Xu Yang, Bo Peng, Huzeyfe Yilmaz, Lina He, Faraz Monifi, Steven He Huang, Gui Lu Long, Lan Yang
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3836–E3844. Published online Sep 2, 2014. doi: 10.1073/pnas.1408283111
PMCID:
PMC4169974

Physics

How to get into that “room at the bottom”
Henrik Flyvbjerg
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13249–13250. Published online Sep 3, 2014. doi: 10.1073/pnas.1414387111
PMCID:
PMC4169944
Convex lens-induced nanoscale templating
Daniel J. Berard, François Michaud, Sara Mahshid, Mohammed Jalal Ahamed, Christopher M. J. McFaul, Jason S. Leith, Pierre Bérubé, Rob Sladek, Walter Reisner, Sabrina R. Leslie
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13295–13300. Published online Aug 4, 2014. doi: 10.1073/pnas.1321089111
PMCID:
PMC4169971

Social Sciences

Anthropology

Joaquín Rodríguez-Vidal, Francesco d’Errico, Francisco Giles Pacheco, Ruth Blasco, Jordi Rosell, Richard P. Jennings, Alain Queffelec, Geraldine Finlayson, Darren A. Fa, José María Gutiérrez López, José S. Carrión, Juan José Negro, Stewart Finlayson, Luís M. Cáceres, Marco A. Bernal, Santiago Fernández Jiménez, Clive Finlayson
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13301–13306. Published online Sep 2, 2014. doi: 10.1073/pnas.1411529111
PMCID:
PMC4169962
Importance of climate-driven forest–savanna biome shifts in anthropological and ecological research
Lucas C. R. Silva
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3831–E3832. Published online Aug 26, 2014. doi: 10.1073/pnas.1413205111
PMCID:
PMC4169923
Reply to Silva: Dynamic human–vegetation–climate interactions at forest ecotones during the late-Holocene in lowland South America
John Francis Carson, Bronwen S. Whitney, Francis E. Mayle, José Iriarte, Heiko Prümers, J. Daniel Soto, Jennifer Watling
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3833. Published online Aug 26, 2014. doi: 10.1073/pnas.1413867111
PMCID:
PMC4169918

Economic Sciences

Children’s strategic theory of mind
Itai Sher, Melissa Koenig, Aldo Rustichini
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13307–13312. Published online Sep 2, 2014. doi: 10.1073/pnas.1403283111
PMCID:
PMC4169981

Psychological and Cognitive Sciences

Statistics show no evidence of gender bias in the public's hurricane preparedness
Steve Maley
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3834. Published online Aug 26, 2014. doi: 10.1073/pnas.1413079111
PMCID:
PMC4169919
Reply to Maley: Yes, appropriate modeling of fatality counts confirms female hurricanes are deadlier
Kiju Jung, Sharon Shavitt, Madhu Viswanathan, Joseph M. Hilbe
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3835. Published online Aug 26, 2014. doi: 10.1073/pnas.1414111111
PMCID:
PMC4169924

Sustainability Science

Paolo Santi, Giovanni Resta, Michael Szell, Stanislav Sobolevsky, Steven H. Strogatz, Carlo Ratti
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13290–13294. Published online Sep 2, 2014. doi: 10.1073/pnas.1403657111
PMCID:
PMC4169909

Biological Sciences

Applied Biological Sciences

Ionic liquids as a class of materials for transdermal delivery and pathogen neutralization
Michael Zakrewsky, Katherine S. Lovejoy, Theresa L. Kern, Tarryn E. Miller, Vivian Le, Amber Nagy, Andrew M. Goumas, Rashi S. Iyer, Rico E. Del Sesto, Andrew T. Koppisch, David T. Fox, Samir Mitragotri
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13313–13318. Published online Aug 25, 2014. doi: 10.1073/pnas.1403995111
PMCID:
PMC4169946

Biochemistry

Jinny L. Liu, Aparna Banerjee Dixit, Kelly L. Robertson, Eric Qiao, Lindsay W. Black
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13319–13324. Published online Aug 26, 2014. doi: 10.1073/pnas.1321940111
PMCID:
PMC4169922
Molecular mechanics of 30S subunit head rotation
Srividya Mohan, John Paul Donohue, Harry F. Noller
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13325–13330. Published online Sep 3, 2014. doi: 10.1073/pnas.1413731111
PMCID:
PMC4169957
Human oxygen sensing may have origins in prokaryotic elongation factor Tu prolyl-hydroxylation
John S. Scotti, Ivanhoe K. H. Leung, Wei Ge, Michael A. Bentley, Jordi Paps, Holger B. Kramer, Joongoo Lee, WeiShen Aik, Hwanho Choi, Steinar M. Paulsen, Lesley A. H. Bowman, Nikita D. Loik, Shoichiro Horita, Chia-hua Ho, Nadia J. Kershaw, Christoph M. Tang, Timothy D. W. Claridge, Gail M. Preston, Michael A. McDonough, Christopher J. Schofield
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13331–13336. Published online Sep 2, 2014. doi: 10.1073/pnas.1409916111
PMCID:
PMC4169948
Transcription factor EKLF (KLF1) recruitment of the histone chaperone HIRA is essential for β-globin gene expression
Shefali Soni, Nikolay Pchelintsev, Peter D. Adams, James J. Bieker
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13337–13342. Published online Sep 2, 2014. doi: 10.1073/pnas.1405422111
PMCID:
PMC4169976
Brent M. Dorr, Hyun Ok Ham, Chihui An, Elliot L. Chaikof, David R. Liu
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13343–13348. Published online Sep 3, 2014. doi: 10.1073/pnas.1411179111
PMCID:
PMC4169943
Structural insight into the molecular mechanism of allosteric activation of human cystathionine β-synthase by S-adenosylmethionine
June Ereño-Orbea, Tomas Majtan, Iker Oyenarte, Jan P. Kraus, Luis Alfonso Martínez-Cruz
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3845–E3852. Published online Sep 2, 2014. doi: 10.1073/pnas.1414545111
PMCID:
PMC4169959
Remodeling of a delivery complex allows ClpS-mediated degradation of N-degron substrates
Izarys Rivera-Rivera, Giselle Román-Hernández, Robert T. Sauer, Tania A. Baker
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3853–E3859. Published online Sep 3, 2014. doi: 10.1073/pnas.1414933111
PMCID:
PMC4169940

Biophysics and Computational Biology

How to get into that “room at the bottom”
Henrik Flyvbjerg
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13249–13250. Published online Sep 3, 2014. doi: 10.1073/pnas.1414387111
PMCID:
PMC4169944
Ellen J. Robertson, Gloria K. Oliver, Menglu Qian, Caroline Proulx, Ronald N. Zuckermann, Geraldine L. Richmond
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13284–13289. Published online Sep 2, 2014. doi: 10.1073/pnas.1414843111
PMCID:
PMC4169914
Convex lens-induced nanoscale templating
Daniel J. Berard, François Michaud, Sara Mahshid, Mohammed Jalal Ahamed, Christopher M. J. McFaul, Jason S. Leith, Pierre Bérubé, Rob Sladek, Walter Reisner, Sabrina R. Leslie
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13295–13300. Published online Aug 4, 2014. doi: 10.1073/pnas.1321089111
PMCID:
PMC4169971
Tian Xie, Chuangye Yan, Rui Zhou, Yanyu Zhao, Linfeng Sun, Guanghui Yang, Peilong Lu, Dan Ma, Yigong Shi
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13349–13354. Published online Sep 2, 2014. doi: 10.1073/pnas.1414837111
PMCID:
PMC4169925
Single-molecule spectroscopy reveals chaperone-mediated expansion of substrate protein
Ruth Kellner, Hagen Hofmann, Alessandro Barducci, Bengt Wunderlich, Daniel Nettels, Benjamin Schuler
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13355–13360. Published online Aug 27, 2014. doi: 10.1073/pnas.1407086111
PMCID:
PMC4169939
Cristina Sisu, Baikang Pei, Jing Leng, Adam Frankish, Yan Zhang, Suganthi Balasubramanian, Rachel Harte, Daifeng Wang, Michael Rutenberg-Schoenberg, Wyatt Clark, Mark Diekhans, Joel Rozowsky, Tim Hubbard, Jennifer Harrow, Mark B. Gerstein
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13361–13366. Published online Aug 25, 2014. doi: 10.1073/pnas.1407293111
PMCID:
PMC4169933
Dan Benveniste, Hans-Joachim Sonntag, Guido Sanguinetti, Duncan Sproul
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13367–13372. Published online Sep 3, 2014. doi: 10.1073/pnas.1412081111
PMCID:
PMC4169916
Şahin Kaya Özdemir, Jiangang Zhu, Xu Yang, Bo Peng, Huzeyfe Yilmaz, Lina He, Faraz Monifi, Steven He Huang, Gui Lu Long, Lan Yang
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3836–E3844. Published online Sep 2, 2014. doi: 10.1073/pnas.1408283111
PMCID:
PMC4169974
Utilization of extracellular information before ligand-receptor binding reaches equilibrium expands and shifts the input dynamic range
Alejandra C. Ventura, Alan Bush, Gustavo Vasen, Matías A. Goldín, Brianne Burkinshaw, Nirveek Bhattacharjee, Albert Folch, Roger Brent, Ariel Chernomoretz, Alejandro Colman-Lerner
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3860–E3869. Published online Aug 29, 2014. doi: 10.1073/pnas.1322761111
PMCID:
PMC4169960

Cell Biology

Direct regulation of GAS6/AXL signaling by HIF promotes renal metastasis through SRC and MET
Erinn B. Rankin, Katherine C. Fuh, Laura Castellini, Kartik Viswanathan, Elizabeth C. Finger, Anh N. Diep, Edward L. LaGory, Mihalis S. Kariolis, Andy Chan, David Lindgren, Håkan Axelson, Yu R. Miao, Adam J. Krieg, Amato J. Giaccia
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13373–13378. Published online Sep 3, 2014. doi: 10.1073/pnas.1404848111
PMCID:
PMC4169907
TRPV6 calcium channel translocates to the plasma membrane via Orai1-mediated mechanism and controls cancer cell survival
Maylis Raphaël, V’yacheslav Lehen’kyi, Matthieu Vandenberghe, Benjamin Beck, Sergiy Khalimonchyk, Fabien Vanden Abeele, Leonardo Farsetti, Emmanuelle Germain, Alexandre Bokhobza, Adriana Mihalache, Pierre Gosset, Christoph Romanin, Philippe Clézardin, Roman Skryma, Natalia Prevarskaya
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3870–E3879. Published online Aug 29, 2014. doi: 10.1073/pnas.1413409111
PMCID:
PMC4169956

Developmental Biology

Endothelial cell FGF signaling is required for injury response but not for vascular homeostasis
Sunday S. Oladipupo, Craig Smith, Andrea Santeford, Changwon Park, Abdoulaye Sene, Luke A. Wiley, Patrick Osei-Owusu, Joann Hsu, Nicole Zapata, Fang Liu, Rei Nakamura, Kory J. Lavine, Kendall J. Blumer, Kyunghee Choi, Rajendra S. Apte, David M. Ornitz
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13379–13384. Published online Aug 19, 2014. doi: 10.1073/pnas.1324235111
PMCID:
PMC4169958
p53 suppression partially rescues the mutant phenotype in mouse models of DiGeorge syndrome
Cinzia Caprio, Antonio Baldini
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13385–13390. Published online Sep 2, 2014. doi: 10.1073/pnas.1401923111
PMCID:
PMC4169961

Ecology

Vortical ciliary flows actively enhance mass transport in reef corals
Orr H. Shapiro, Vicente I. Fernandez, Melissa Garren, Jeffrey S. Guasto, François P. Debaillon-Vesque, Esti Kramarsky-Winter, Assaf Vardi, Roman Stocker
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13391–13396. Published online Sep 5, 2014. doi: 10.1073/pnas.1323094111
PMCID:
PMC4169935
Polarization signaling in swordtails alters female mate preference
Gina M. Calabrese, Parrish C. Brady, Viktor Gruev, Molly E. Cummings
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13397–13402. Published online Sep 2, 2014. doi: 10.1073/pnas.1321368111
PMCID:
PMC4169938
Importance of climate-driven forest–savanna biome shifts in anthropological and ecological research
Lucas C. R. Silva
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3831–E3832. Published online Aug 26, 2014. doi: 10.1073/pnas.1413205111
PMCID:
PMC4169923
Reply to Silva: Dynamic human–vegetation–climate interactions at forest ecotones during the late-Holocene in lowland South America
John Francis Carson, Bronwen S. Whitney, Francis E. Mayle, José Iriarte, Heiko Prümers, J. Daniel Soto, Jennifer Watling
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3833. Published online Aug 26, 2014. doi: 10.1073/pnas.1413867111
PMCID:
PMC4169918

Evolution

Fei Dai, Zhong-Hua Chen, Xiaolei Wang, Zefeng Li, Gulei Jin, Dezhi Wu, Shengguan Cai, Ning Wang, Feibo Wu, Eviatar Nevo, Guoping Zhang
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13403–13408. Published online Sep 2, 2014. doi: 10.1073/pnas.1414335111
PMCID:
PMC4169977

Genetics

Kristin A. Knouse, Jie Wu, Charles A. Whittaker, Angelika Amon
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13409–13414. Published online Sep 2, 2014. doi: 10.1073/pnas.1415287111
PMCID:
PMC4169915
Combined fluorescent and electron microscopic imaging unveils the specific properties of two classes of meiotic crossovers
Lorinda K. Anderson, Leslie D. Lohmiller, Xiaomin Tang, D. Boyd Hammond, Lauren Javernick, Lindsay Shearer, Sayantani Basu-Roy, Olivier C. Martin, Matthieu Falque
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13415–13420. Published online Sep 2, 2014. doi: 10.1073/pnas.1406846111
PMCID:
PMC4169947
Translation initiation factor eIF4F modifies the dexamethasone response in multiple myeloma
Francis Robert, William Roman, Alexandre Bramoullé, Christof Fellmann, Anne Roulston, Chaim Shustik, John A. Porco, Jr., Gordon C. Shore, Michael Sebag, Jerry Pelletier
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13421–13426. Published online Sep 2, 2014. doi: 10.1073/pnas.1402650111
PMCID:
PMC4169926
Floris Foijer, Stephanie Z. Xie, Judith E. Simon, Petra L. Bakker, Nathalie Conte, Stephanie H. Davis, Eva Kregel, Jos Jonkers, Allan Bradley, Peter K. Sorger
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13427–13432. Published online Sep 2, 2014. doi: 10.1073/pnas.1400892111
PMCID:
PMC4169945
Controlled sumoylation of the mevalonate pathway enzyme HMGS-1 regulates metabolism during aging
Amir Sapir, Assaf Tsur, Thijs Koorman, Kaitlin Ching, Prashant Mishra, Annabelle Bardenheier, Lisa Podolsky, Ulrike Bening-Abu-Shach, Mike Boxem, Tsui-Fen Chou, Limor Broday, Paul W. Sternberg
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3880–E3889. Published online Sep 3, 2014. doi: 10.1073/pnas.1414748111
PMCID:
PMC4169931

Immunology and Inflammation

Activation of iNKT cells by a distinct constituent of the endogenous glucosylceramide fraction
Patrick J. Brennan, Raju V. V. Tatituri, Christian Heiss, Gerald F. M. Watts, Fong-Fu Hsu, Natacha Veerapen, Liam R. Cox, Parastoo Azadi, Gurdyal S. Besra, Michael B. Brenner
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13433–13438. Published online Sep 2, 2014. doi: 10.1073/pnas.1415357111
PMCID:
PMC4169973
Preferential infection of human Ad5-specific CD4 T cells by HIV in Ad5 naturally exposed and recombinant Ad5-HIV vaccinated individuals
Haitao Hu, Michael A. Eller, Shah Zafar, Yu Zhou, Mengnan Gu, Zhi Wei, Jeffrey R. Currier, Mary A. Marovich, Hannah N. Kibuuka, Robert T. Bailer, Richard A. Koup, Merlin L. Robb, Nelson L. Michael, Jerome H. Kim, Silvia Ratto-Kim
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13439–13444. Published online Sep 2, 2014. doi: 10.1073/pnas.1400446111
PMCID:
PMC4169982
Complement activation by ligand-driven juxtaposition of discrete pattern recognition complexes
Søren E. Degn, Troels R. Kjaer, Rune T. Kidmose, Lisbeth Jensen, Annette G. Hansen, Mustafa Tekin, Jens C. Jensenius, Gregers R. Andersen, Steffen Thiel
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13445–13450. Published online Sep 2, 2014. doi: 10.1073/pnas.1406849111
PMCID:
PMC4169954
A TNFSF15 disease-risk polymorphism increases pattern-recognition receptor-induced signaling through caspase-8–induced IL-1
Matija Hedl, Clara Abraham
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13451–13456. Published online Sep 2, 2014. doi: 10.1073/pnas.1404178111
PMCID:
PMC4169936
Stat3 promotes IL-10 expression in lupus T cells through trans-activation and chromatin remodeling
Christian M. Hedrich, Thomas Rauen, Sokratis A. Apostolidis, Alexandros P. Grammatikos, Noe Rodriguez Rodriguez, Christina Ioannidis, Vasileios C. Kyttaris, Jose C. Crispin, George C. Tsokos
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13457–13462. Published online Sep 3, 2014. doi: 10.1073/pnas.1408023111
PMCID:
PMC4169908
Susanna R. Bidgood, Jerry C. H. Tam, William A. McEwan, Donna L. Mallery, Leo C. James
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13463–13468. Published online Aug 28, 2014. doi: 10.1073/pnas.1410980111
PMCID:
PMC4169910
Guangrui Huang, Shengfeng Huang, Xinyu Yan, Ping Yang, Jun Li, Weiya Xu, Lingling Zhang, Ruihua Wang, Yingcai Yu, Shaochun Yuan, Shangwu Chen, Guangbin Luo, Anlong Xu
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13469–13474. Published online Sep 3, 2014. doi: 10.1073/pnas.1405414111
PMCID:
PMC4169980
Nup98 promotes antiviral gene expression to restrict RNA viral infection in Drosophila
Debasis Panda, Pau Pascual-Garcia, Margaret Dunagin, Matthew Tudor, Kaycie C. Hopkins, Jie Xu, Beth Gold, Arjun Raj, Maya Capelson, Sara Cherry
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3890–E3899. Published online Sep 2, 2014. doi: 10.1073/pnas.1410087111
PMCID:
PMC4169978

Medical Sciences

Stochastic variability in HIV affects viral eradication
Igor M. Rouzine, Brandon S. Razooky, Leor S. Weinberger
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13251–13252. Published online Sep 8, 2014. doi: 10.1073/pnas.1413362111
PMCID:
PMC4169906
Predicting the outcomes of treatment to eradicate the latent reservoir for HIV-1
Alison L. Hill, Daniel I. S. Rosenbloom, Feng Fu, Martin A. Nowak, Robert F. Siliciano
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13475–13480. Published online Aug 5, 2014. doi: 10.1073/pnas.1406663111
PMCID:
PMC4169952
Clearance of pathological antibodies using biomimetic nanoparticles
Jonathan A. Copp, Ronnie H. Fang, Brian T. Luk, Che-Ming J. Hu, Weiwei Gao, Kang Zhang, Liangfang Zhang
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13481–13486. Published online Sep 2, 2014. doi: 10.1073/pnas.1412420111
PMCID:
PMC4169917
Mitochondrial reactive oxygen species are scavenged by Cockayne syndrome B protein in human fibroblasts without nuclear DNA damage
James E. Cleaver, Angela M. Brennan-Minnella, Raymond A. Swanson, Ka-wing Fong, Junjie Chen, Kai-ming Chou, Yih-wen Chen, Ingrid Revet, Vladimir Bezrookove
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13487–13492. Published online Aug 18, 2014. doi: 10.1073/pnas.1414135111
PMCID:
PMC4169934
Genetic variants of ApoE and ApoER2 differentially modulate endothelial function
Victoria Ulrich, Eddy S. Konaniah, Joachim Herz, Robert D. Gerard, Eunjeong Jung, Ivan S. Yuhanna, Mohamed Ahmed, David Y. Hui, Chieko Mineo, Philip W. Shaul
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13493–13498. Published online Sep 2, 2014. doi: 10.1073/pnas.1402106111
PMCID:
PMC4169937
Lorenz H. Lehmann, Julia S. Rostosky, Sebastian J. Buss, Michael M. Kreusser, Jutta Krebs, Walter Mier, Frank Enseleit, Katharina Spiger, Stefan E. Hardt, Thomas Wieland, Markus Haass, Thomas F. Lüscher, Michael D. Schneider, Rosanna Parlato, Hermann-Josef Gröne, Uwe Haberkorn, Masashi Yanagisawa, Hugo A. Katus, Johannes Backs
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13499–13504. Published online Sep 2, 2014. doi: 10.1073/pnas.1409026111
PMCID:
PMC4169911
Reiko Satow, Tamaki Hirano, Ryosuke Batori, Tomomi Nakamura, Yumi Murayama, Kiyoko Fukami
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13505–13510. Published online Sep 2, 2014. doi: 10.1073/pnas.1405374111
PMCID:
PMC4169964
Yaqian Li, Wei Liu, Fei Liu, Yang Zeng, Simin Zuo, Siyu Feng, Chunxiao Qi, Bingjie Wang, Xiaojun Yan, Ali Khademhosseini, Jing Bai, Yanan Du
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13511–13516. Published online Sep 2, 2014. doi: 10.1073/pnas.1411295111
PMCID:
PMC4169950

Microbiology

Noncanonical SMC protein in Mycobacterium smegmatis restricts maintenance of Mycobacterium fortuitum plasmids
Michael W. Panas, Paras Jain, Hui Yang, Shimontini Mitra, Debasis Biswas, Alice Rebecca Wattam, Norman L. Letvin, William R. Jacobs, Jr.
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13264–13271. Published online Sep 2, 2014. doi: 10.1073/pnas.1414207111
PMCID:
PMC4169951
Antiinfective therapy with a small molecule inhibitor of Staphylococcus aureus sortase
Jie Zhang, Hongchuan Liu, Kongkai Zhu, Shouzhe Gong, Shaynoor Dramsi, Ya-Ting Wang, Jiafei Li, Feifei Chen, Ruihan Zhang, Lu Zhou, Lefu Lan, Hualiang Jiang, Olaf Schneewind, Cheng Luo, Cai-Guang Yang
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13517–13522. Published online Sep 2, 2014. doi: 10.1073/pnas.1408601111
PMCID:
PMC4169930
Conformational change in the periplamic region of the flagellar stator coupled with the assembly around the rotor
Shiwei Zhu, Masato Takao, Na Li, Mayuko Sakuma, Yuuki Nishino, Michio Homma, Seiji Kojima, Katsumi Imada
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13523–13528. Published online Sep 2, 2014. doi: 10.1073/pnas.1324201111
PMCID:
PMC4169928
One severe acute respiratory syndrome coronavirus protein complex integrates processive RNA polymerase and exonuclease activities
Lorenzo Subissi, Clara C. Posthuma, Axelle Collet, Jessika C. Zevenhoven-Dobbe, Alexander E. Gorbalenya, Etienne Decroly, Eric J. Snijder, Bruno Canard, Isabelle Imbert
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3900–E3909. Published online Sep 2, 2014. doi: 10.1073/pnas.1323705111
PMCID:
PMC4169972
Xylella fastidiosa outer membrane vesicles modulate plant colonization by blocking attachment to surfaces
Michael Ionescu, Paulo A. Zaini, Clelia Baccari, Sophia Tran, Aline M. da Silva, Steven E. Lindow
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3910–E3918. Published online Sep 2, 2014. doi: 10.1073/pnas.1414944111
PMCID:
PMC4169949

Neuroscience

Blood–brain biomarkers for stress susceptibility
Sumantra Chattarji, Rajnish P. Rao
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13253–13254. Published online Sep 3, 2014. doi: 10.1073/pnas.1414663111
PMCID:
PMC4169963
Expression profiling associates blood and brain glucocorticoid receptor signaling with trauma-related individual differences in both sexes
Nikolaos P. Daskalakis, Hagit Cohen, Guiqing Cai, Joseph D. Buxbaum, Rachel Yehuda
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13529–13534. Published online Aug 11, 2014. doi: 10.1073/pnas.1401660111
PMCID:
PMC4169965
Optogenetic activation of septal cholinergic neurons suppresses sharp wave ripples and enhances theta oscillations in the hippocampus
Marie Vandecasteele, Viktor Varga, Antal Berényi, Edit Papp, Péter Barthó, Laurent Venance, Tamás F. Freund, György Buzsáki
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13535–13540. Published online Sep 2, 2014. doi: 10.1073/pnas.1411233111
PMCID:
PMC4169920
HDAC3 controls gap 2/mitosis progression in adult neural stem/progenitor cells by regulating CDK1 levels
Yindi Jiang, Jenny Hsieh
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13541–13546. Published online Aug 26, 2014. doi: 10.1073/pnas.1411939111
PMCID:
PMC4169927
Phospholipase D2 specifically regulates TREK potassium channels via direct interaction and local production of phosphatidic acid
Yannick Comoglio, Joshua Levitz, Michael A. Kienzler, Florian Lesage, Ehud Y. Isacoff, Guillaume Sandoz
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13547–13552. Published online Sep 2, 2014. doi: 10.1073/pnas.1407160111
PMCID:
PMC4169921
Vladislav Kozyrev, Ulf T. Eysel, Dirk Jancke
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13553–13558. Published online Sep 3, 2014. doi: 10.1073/pnas.1405508111
PMCID:
PMC4169942
Connexin hemichannels contribute to spontaneous electrical activity in the human fetal cortex
Anna R. Moore, Wen-Liang Zhou, Carissa L. Sirois, Glenn S. Belinsky, Nada Zecevic, Srdjan D. Antic
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3919–E3928. Published online Sep 2, 2014. doi: 10.1073/pnas.1405253111
PMCID:
PMC4169969
C-terminal domain small phosphatase 1 and MAP kinase reciprocally control REST stability and neuronal differentiation
Edmund Nesti, Glen M. Corson, Maxwell McCleskey, Jon A. Oyer, Gail Mandel
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3929–E3936. Published online Sep 2, 2014. doi: 10.1073/pnas.1414770111
PMCID:
PMC4169941

Pharmacology

Kyle L. Flannigan, Terence A. Agbor, Rory W. Blackler, Janice J. Kim, Waliul I. Khan, Elena F. Verdu, Jose G. P. Ferraz, John L. Wallace
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13559–13564. Published online Sep 3, 2014. doi: 10.1073/pnas.1413390111
PMCID:
PMC4169975

Plant Biology

Epigenetic role for the conserved Fe-S cluster biogenesis protein AtDRE2 in Arabidopsis thaliana
Diana Mihaela Buzas, Miyuki Nakamura, Tetsu Kinoshita
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13565–13570. Published online Sep 2, 2014. doi: 10.1073/pnas.1404058111
PMCID:
PMC4169955
Koichiro Awai, Hiroyuki Ohta, Naoki Sato
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13571–13575. Published online Sep 2, 2014. doi: 10.1073/pnas.1403708111
PMCID:
PMC4169966

Psychological and Cognitive Sciences

Luke Maurits, Thomas L. Griffiths
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13576–13581. Published online Sep 5, 2014. doi: 10.1073/pnas.1319042111
PMCID:
PMC4169967

Sustainability Science

Does aquaculture add resilience to the global food system?
Max Troell, Rosamond L. Naylor, Marc Metian, Malcolm Beveridge, Peter H. Tyedmers, Carl Folke, Kenneth J. Arrow, Scott Barrett, Anne-Sophie Crépin, Paul R. Ehrlich, Åsa Gren, Nils Kautsky, Simon A. Levin, Karine Nyborg, Henrik Österblom, Stephen Polasky, Marten Scheffer, Brian H. Walker, Tasos Xepapadeas, Aart de Zeeuw
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13257–13263. Published online Aug 18, 2014. doi: 10.1073/pnas.1404067111
PMCID:
PMC4169979

Systems Biology

Mixtures of opposing phosphorylations within hexamers precisely time feedback in the cyanobacterial circadian clock
Jenny Lin, Justin Chew, Udaysankar Chockanathan, Michael J. Rust
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): E3937–E3945. Published online Sep 2, 2014. doi: 10.1073/pnas.1408692111
PMCID:
PMC4169968

Correction

Retraction

Retraction for Dixson et al., Identification of gene ontologies linked to prefrontal–hippocampal functional coupling in the human brain
Proc Natl Acad Sci U S A. Sep 16, 2014; 111(37): 13582. Published online Sep 2, 2014. doi: 10.1073/pnas.1414905111
PMCID:
PMC4169929

Articles from Proceedings of the National Academy of Sciences of the United States of America are provided here courtesy of National Academy of Sciences