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Volume 16(1);  2015

Reviewer Acknowledgement

Irene Pala
BMC Bioinformatics. 2015; 16(1): 87. Published online 2015 Mar 15. doi: 10.1186/s12859-015-0459-6
PMCID:
PMC4359550

Sequence Analysis (Methods)

Laxmi Parida, Niina Haiminen
BMC Bioinformatics. 2015; 16(1): 82. Published online 2015 Mar 14. doi: 10.1186/s12859-015-0525-0
PMCID:
PMC4372275

Software

Wandrille Duchemin, Pierre-Yves Dupont, Matthew A Campbell, Austen RD Ganley, Murray P Cox
BMC Bioinformatics. 2014; 16(1): 8. Published online 2015 Jan 16. doi: 10.1186/s12859-014-0433-8
PMCID:
PMC4300824
Eric Marinier, Daniel G Brown, Brendan J McConkey
BMC Bioinformatics. 2014; 16(1): 10. Published online 2015 Jan 16. doi: 10.1186/s12859-014-0435-6
PMCID:
PMC4307147
Nicholas Johnson, Huanan Zhang, Gang Fang, Vipin Kumar, Rui Kuang
BMC Bioinformatics. 2014; 16(1): 16. Published online 2015 Jan 16. doi: 10.1186/s12859-014-0426-7
PMCID:
PMC4305219
Federico Comoglio, Cem Sievers, Renato Paro
BMC Bioinformatics. 2015; 16(1): 32. Published online 2015 Feb 1. doi: 10.1186/s12859-015-0470-y
PMCID:
PMC4339748
Vittorio Fortino, Harri Alenius, Dario Greco
BMC Bioinformatics. 2015; 16(1): 37. Published online 2015 Feb 5. doi: 10.1186/s12859-015-0477-4
PMCID:
PMC4377007
Edgardo Mejía-Roa, Daniel Tabas-Madrid, Javier Setoain, Carlos García, Francisco Tirado, Alberto Pascual-Montano
BMC Bioinformatics. 2015; 16(1): 43. Published online 2015 Feb 13. doi: 10.1186/s12859-015-0485-4
PMCID:
PMC4339678
Koki Tsuyuzaki, Gota Morota, Manabu Ishii, Takeru Nakazato, Satoru Miyazaki, Itoshi Nikaido
BMC Bioinformatics. 2015; 16(1): 45. Published online 2015 Feb 15. doi: 10.1186/s12859-015-0453-z
PMCID:
PMC4343279
Fengqiong Huang, James A Macklin, Hong Cui, Heather A Cole, Lorena Endara
BMC Bioinformatics. 2015; 16(1): 47. Published online 2015 Feb 15. doi: 10.1186/s12859-015-0488-1
PMCID:
PMC4339750
Konrad Zych, Yang Li, Joeri K van der Velde, Ronny VL Joosen, Wilco Ligterink, Ritsert C Jansen, Danny Arends
BMC Bioinformatics. 2015; 16(1): 51. Published online 2015 Feb 19. doi: 10.1186/s12859-015-0475-6
PMCID:
PMC4339742
Pablo Moreno, Stephan Beisken, Bhavana Harsha, Venkatesh Muthukrishnan, Ilinca Tudose, Adriano Dekker, Stefanie Dornfeldt, Franziska Taruttis, Ivo Grosse, Janna Hastings, Steffen Neumann, Christoph Steinbeck
BMC Bioinformatics. 2015; 16(1): 56. Published online 2015 Feb 21. doi: 10.1186/s12859-015-0486-3
PMCID:
PMC4349482
Sandeep K Kushwaha, Lokeshwaran Manoharan, Tejashwari Meerupati, Katarina Hedlund, Dag Ahrén
BMC Bioinformatics. 2015; 16(1): 65. Published online 2015 Feb 28. doi: 10.1186/s12859-015-0501-8
PMCID:
PMC4355349
Maochun Qin, Biao Liu, Jeffrey M Conroy, Carl D Morrison, Qiang Hu, Yubo Cheng, Mitsuko Murakami, Adekunle O Odunsi, Candace S Johnson, Lei Wei, Song Liu, Jianmin Wang
BMC Bioinformatics. 2015; 16(1): 66. Published online 2015 Feb 28. doi: 10.1186/s12859-015-0502-7
PMCID:
PMC4349766
Radu M Suciu, Emir Aydin, Brian E Chen
BMC Bioinformatics. 2015; 16(1): 67. Published online 2015 Feb 28. doi: 10.1186/s12859-015-0497-0
PMCID:
PMC4349619
Koen Herten, Matthew S Hestand, Joris R Vermeesch, Jeroen KJ Van Houdt
BMC Bioinformatics. 2015; 16(1): 73. Published online 2015 Mar 6. doi: 10.1186/s12859-015-0514-3
PMCID:
PMC4359581
Monika Michalovova, Zdenek Kubat, Roman Hobza, Boris Vyskot, Eduard Kejnovsky
BMC Bioinformatics. 2015; 16(1): 78. Published online 2015 Mar 11. doi: 10.1186/s12859-015-0509-0
PMCID:
PMC4367819
Lars Snipen, Kristian Hovde Liland
BMC Bioinformatics. 2015; 16(1): 79. Published online 2015 Mar 12. doi: 10.1186/s12859-015-0517-0
PMCID:
PMC4375852
Rodrigo Liberal, Beata K Lisowska, David J Leak, John W Pinney
BMC Bioinformatics. 2015; 16(1): 86. Published online 2015 Mar 15. doi: 10.1186/s12859-014-0447-2
PMCID:
PMC4367891

Research Articles

Dimitar Hristovski, Dejan Dinevski, Andrej Kastrin, Thomas C Rindflesch
BMC Bioinformatics. 2014; 16(1): 6. Published online 2015 Jan 16. doi: 10.1186/s12859-014-0365-3
PMCID:
PMC4307891
Askar Obulkasim, Gerrit A Meijer, Mark A van de Wiel
BMC Bioinformatics. 2014; 16(1): 15. Published online 2015 Jan 16. doi: 10.1186/s12859-014-0448-1
PMCID:
PMC4302100
Jyoti Shankar, Sebastian Szpakowski, Norma V Solis, Stephanie Mounaud, Hong Liu, Liliana Losada, William C Nierman, Scott G Filler
BMC Bioinformatics. 2015; 16(1): 31. Published online 2015 Feb 1. doi: 10.1186/s12859-015-0467-6
PMCID:
PMC4339743
Juliana S Bernardes, Fabio RJ Vieira, Lygia MM Costa, Gerson Zaverucha
BMC Bioinformatics. 2015; 16(1): 34. Published online 2015 Feb 5. doi: 10.1186/s12859-014-0445-4
PMCID:
PMC4339679
Mina Cintho Ozahata, Ester Cerdeira Sabino, Ricardo Sobhie Diaz, Roberto M Cesar-, Jr, João Eduardo Ferreira
BMC Bioinformatics. 2015; 16(1): 35. Published online 2015 Feb 5. doi: 10.1186/s12859-015-0452-0
PMCID:
PMC4344997
Chengyao Zhong, Zhiwei Hou, Jihua Huang, Qingdong Xie, Ying Zhong
BMC Bioinformatics. 2015; 16(1): 38. Published online 2015 Feb 5. doi: 10.1186/s12859-015-0481-8
PMCID:
PMC4339741
Alison Callahan, Juan José Cifuentes, Michel Dumontier
BMC Bioinformatics. 2015; 16(1): 40. Published online 2015 Feb 7. doi: 10.1186/s12859-015-0469-4
PMCID:
PMC4339751
Ramon Diaz-Uriarte
BMC Bioinformatics. 2015; 16(1): 41. Published online 2015 Feb 12. doi: 10.1186/s12859-015-0466-7
PMCID:
PMC4339747
Aakrosh Ratan, Thomas L Olson, Thomas P Loughran, Jr, Webb Miller
BMC Bioinformatics. 2015; 16(1): 42. Published online 2015 Feb 13. doi: 10.1186/s12859-015-0483-6
PMCID:
PMC4339746
Michael Binns, Pedro de Atauri, Anestis Vlysidis, Marta Cascante, Constantinos Theodoropoulos
BMC Bioinformatics. 2015; 16(1): 49. Published online 2015 Feb 18. doi: 10.1186/s12859-015-0476-5
PMCID:
PMC4350952
Lariza Laura de Oliveira, Paulo SL de Oliveira, Renato Tinós
BMC Bioinformatics. 2015; 16(1): 52. Published online 2015 Feb 19. doi: 10.1186/s12859-015-0480-9
PMCID:
PMC4341243
Ailith Pirie, Angela Wood, Michael Lush, Jonathan Tyrer, Paul DP Pharoah
BMC Bioinformatics. 2015; 16(1): 53. Published online 2015 Feb 20. doi: 10.1186/s12859-015-0496-1
PMCID:
PMC4339749
Sun Kim, Zhiyong Lu, W John Wilbur
BMC Bioinformatics. 2015; 16(1): 57. Published online 2015 Feb 21. doi: 10.1186/s12859-015-0487-2
PMCID:
PMC4349776
A Ranjitha Dhanasekaran, Jon L Pearson, Balasubramanian Ganesan, Bart C Weimer
BMC Bioinformatics. 2015; 16(1): 62. Published online 2015 Feb 25. doi: 10.1186/s12859-015-0462-y
PMCID:
PMC4347650
Marcilio CP de Souto, Pablo A Jaskowiak, Ivan G Costa
BMC Bioinformatics. 2015; 16(1): 64. Published online 2015 Feb 26. doi: 10.1186/s12859-015-0494-3
PMCID:
PMC4350881
Etienne Lord, Abdoulaye Baniré Diallo, Vladimir Makarenkov
BMC Bioinformatics. 2015; 16(1): 68. Published online 2015 Mar 3. doi: 10.1186/s12859-015-0508-1
PMCID:
PMC4354763
Yancy Lo, Hyun M Kang, Matthew R Nelson, Mohammad I Othman, Stephanie L Chissoe, Margaret G Ehm, Gonçalo R Abecasis, Sebastian Zöllner
BMC Bioinformatics. 2015; 16(1): 75. Published online 2015 Mar 7. doi: 10.1186/s12859-015-0489-0
PMCID:
PMC4359451
Xi-Mei Zhang, Lin Guo, Mei-Hua Chi, Hong-Mei Sun, Xiao-Wen Chen
BMC Bioinformatics. 2015; 16(1): 76. Published online 2015 Mar 7. doi: 10.1186/s12859-015-0512-5
PMCID:
PMC4355475
Xiang Zhan, Andrew D Patterson, Debashis Ghosh
BMC Bioinformatics. 2015; 16(1): 77. Published online 2015 Mar 11. doi: 10.1186/s12859-015-0506-3
PMCID:
PMC4359587
Nathan Weinstein, Elizabeth Ortiz-Gutiérrez, Stalin Muñoz, David A Rosenblueth, Elena R Álvarez-Buylla, Luis Mendoza
BMC Bioinformatics. 2015; 16(1): 81. Published online 2015 Mar 13. doi: 10.1186/s12859-015-0498-z
PMCID:
PMC4367908
Nicolas Fiorini, Sylvie Ranwez, Jacky Montmain, Vincent Ranwez
BMC Bioinformatics. 2015; 16(1): 83. Published online 2015 Mar 14. doi: 10.1186/s12859-015-0513-4
PMCID:
PMC4367850
André Lacour, Vitalia Schüller, Dmitriy Drichel, Christine Herold, Frank Jessen, Markus Leber, Wolfgang Maier, Markus M Noethen, Alfredo Ramirez, Tatsiana Vaitsiakhovich, Tim Becker
BMC Bioinformatics. 2015; 16(1): 84. Published online 2015 Mar 14. doi: 10.1186/s12859-015-0521-4
PMCID:
PMC4367953
Lichun Ma, Debby D Wang, Yiqing Huang, Hong Yan, Maria P Wong, Victor HF Lee
BMC Bioinformatics. 2015; 16(1): 85. Published online 2015 Mar 14. doi: 10.1186/s12859-015-0522-3
PMCID:
PMC4364680
Bill Hill, Richard A Baldock
BMC Bioinformatics. 2015; 16(1): 90. Published online 2015 Mar 18. doi: 10.1186/s12859-015-0504-5
PMCID:
PMC4374577
Xindong Zhang, Lin Gao, Zhi-Ping Liu, Luonan Chen
BMC Bioinformatics. 2015; 16(1): 92. Published online 2015 Mar 18. doi: 10.1186/s12859-015-0519-y
PMCID:
PMC4374500
Xinan Holly Yang, Meiyi Li, Bin Wang, Wanqi Zhu, Aurelie Desgardin, Kenan Onel, Jill de Jong, Jianjun Chen, Luonan Chen, John M Cunningham
BMC Bioinformatics. 2015; 16(1): 97. Published online 2015 Mar 24. doi: 10.1186/s12859-015-0510-7
PMCID:
PMC4376348

Methodology Articles

Vikas Bansal, Ondrej Libiger
BMC Bioinformatics. 2014; 16(1): 4. Published online 2015 Jan 16. doi: 10.1186/s12859-014-0418-7
PMCID:
PMC4301802
Martin Walker, María-Gloria Basáñez, André Lin Ouédraogo, Cornelus Hermsen, Teun Bousema, Thomas S Churcher
BMC Bioinformatics. 2014; 16(1): 5. Published online 2015 Jan 16. doi: 10.1186/s12859-014-0402-2
PMCID:
PMC4307378
Xiaowei Wu, Ming-an Sun, Hongxiao Zhu, Hehuang Xie
BMC Bioinformatics. 2014; 16(1): 11. Published online 2015 Jan 16. doi: 10.1186/s12859-014-0439-2
PMCID:
PMC4302125
Robert J Flassig, Iryna Migal, Esther van der Zalm, Liisa Rihko-Struckmann, Kai Sundmacher
BMC Bioinformatics. 2014; 16(1): 13. Published online 2015 Jan 16. doi: 10.1186/s12859-014-0436-5
PMCID:
PMC4310145
Shanshan Cheng, Yang Zhang, Charles L Brooks, III
BMC Bioinformatics. 2015; 16(1): 33. Published online 2015 Feb 1. doi: 10.1186/s12859-015-0471-x
PMCID:
PMC4339745
Ying Wang, Haiyan Hu, Xiaoman Li
BMC Bioinformatics. 2015; 16(1): 36. Published online 2015 Feb 5. doi: 10.1186/s12859-015-0473-8
PMCID:
PMC4339733
Yang Song, Lei Hua, Bruce A Shapiro, Jason TL Wang
BMC Bioinformatics. 2015; 16(1): 39. Published online 2015 Feb 6. doi: 10.1186/s12859-015-0464-9
PMCID:
PMC4339682
Jiajie Peng, Sahra Uygun, Taehyong Kim, Yadong Wang, Seung Y Rhee, Jin Chen
BMC Bioinformatics. 2015; 16(1): 44. Published online 2015 Feb 14. doi: 10.1186/s12859-015-0474-7
PMCID:
PMC4339680
Sungho Won, Wonji Kim, Sungyoung Lee, Young Lee, Joohon Sung, Taesung Park
BMC Bioinformatics. 2015; 16(1): 46. Published online 2015 Feb 15. doi: 10.1186/s12859-015-0484-5
PMCID:
PMC4339744
Jiehuan Sun, Hongyu Zhao
BMC Bioinformatics. 2015; 16(1): 48. Published online 2015 Feb 18. doi: 10.1186/s12859-014-0443-6
PMCID:
PMC4355996
David Kracht, Steffen Schober
BMC Bioinformatics. 2015; 16(1): 50. Published online 2015 Feb 18. doi: 10.1186/s12859-015-0482-7
PMCID:
PMC4339740
Hui-Ling Huang, Yu-Chung Wu, Li-Jen Su, Yun-Ju Huang, Phasit Charoenkwan, Wen-Liang Chen, Hua-Chin Lee, William Cheng-Chung Chu, Shinn-Ying Ho
BMC Bioinformatics. 2015; 16(1): 54. Published online 2015 Feb 21. doi: 10.1186/s12859-015-0463-x
PMCID:
PMC4349617
Stanley Kimbung Mbandi, Uljana Hesse, Peter van Heusden, Alan Christoffels
BMC Bioinformatics. 2015; 16(1): 58. Published online 2015 Feb 21. doi: 10.1186/s12859-015-0492-5
PMCID:
PMC4344733
Bie Verbist, Lieven Clement, Joke Reumers, Kim Thys, Alexander Vapirev, Willem Talloen, Yves Wetzels, Joris Meys, Jeroen Aerssens, Luc Bijnens, Olivier Thas
BMC Bioinformatics. 2015; 16(1): 59. Published online 2015 Feb 22. doi: 10.1186/s12859-015-0458-7
PMCID:
PMC4369097
Matthias Heinig, Maria Colomé-Tatché, Aaron Taudt, Carola Rintisch, Sebastian Schafer, Michal Pravenec, Norbert Hubner, Martin Vingron, Frank Johannes
BMC Bioinformatics. 2015; 16(1): 60. Published online 2015 Feb 22. doi: 10.1186/s12859-015-0491-6
PMCID:
PMC4347972
Juan P Steibel, Heng Wang, Ping-Shou Zhong
BMC Bioinformatics. 2015; 16(1): 61. Published online 2015 Feb 22. doi: 10.1186/s12859-015-0479-2
PMCID:
PMC4351697
Caleb K Stein, Pingping Qu, Joshua Epstein, Amy Buros, Adam Rosenthal, John Crowley, Gareth Morgan, Bart Barlogie
BMC Bioinformatics. 2015; 16(1): 63. Published online 2015 Feb 25. doi: 10.1186/s12859-015-0478-3
PMCID:
PMC4355992
Matthias Scheuch, Dirk Höper, Martin Beer
BMC Bioinformatics. 2015; 16(1): 69. Published online 2015 Mar 3. doi: 10.1186/s12859-015-0503-6
PMCID:
PMC4351923
H Robert Frost, Zhigang Li, Jason H Moore
BMC Bioinformatics. 2015; 16(1): 70. Published online 2015 Mar 3. doi: 10.1186/s12859-015-0490-7
PMCID:
PMC4365810
Watcharaporn Tanchotsrinon, Chidchanok Lursinsap, Yong Poovorawan
BMC Bioinformatics. 2015; 16(1): 71. Published online 2015 Mar 5. doi: 10.1186/s12859-015-0493-4
PMCID:
PMC4375884
Chuan Jiang, Chao Chen, Ziyue Huang, Renyi Liu, Jerome Verdier
BMC Bioinformatics. 2015; 16(1): 72. Published online 2015 Mar 5. doi: 10.1186/s12859-015-0507-2
PMCID:
PMC4351942
Wuming Gong, Naoko Koyano-Nakagawa, Tongbin Li, Daniel J Garry
BMC Bioinformatics. 2015; 16(1): 74. Published online 2015 Mar 7. doi: 10.1186/s12859-015-0460-0
PMCID:
PMC4359553
Juyong Lee, Kiho Lee, InSuk Joung, Keehyoung Joo, Bernard R Brooks, Jooyoung Lee
BMC Bioinformatics. 2015; 16(1): 94. Published online 2015 Mar 21. doi: 10.1186/s12859-015-0526-z
PMCID:
PMC4374281

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