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Consensus clustering and functional interpretation of gene-expression data
Stephen Swift, Allan Tucker, Veronica Vinciotti, Nigel Martin, Christine Orengo, Xiaohui Liu, Paul Kellam
Genome Biol. 2004; 5(11): R94. Published online 2004 November 1. doi: 10.1186/gb-2004-5-11-r94
PMCID:
PMC545785
Abstract Full Text PDF–780K

Is Cited by the Following 11 Articles in this Archive:

Bioinformatics tools in predictive ecology: applications to fisheries
Allan Tucker, Daniel Duplisea
Philos Trans R Soc Lond B Biol Sci. 2012 January 19; 367(1586): 279–290. doi: 10.1098/rstb.2011.0184
PMCID:
PMC3223807
Abstract Full Text PDF–919K
Robust consensus clustering for identification of expressed genes linked to malignancy of human colorectal carcinoma
Gatot Wahyudi, Ito Wasito, Tisha Melia, Indra Budi
Bioinformation. 2011; 6(7): 279–282. Published online 2011 June 23.
PMCID:
PMC3124694
Abstract Full Text PDF–150K Supplementary Material
SC2ATmd: a tool for integration of the figure of merit with cluster analysis for gene expression data
Amy L. Olex, Jacquelyn S. Fetrow
Bioinformatics. 2011 May 1; 27(9): 1330–1331. Published online 2011 March 3. doi: 10.1093/bioinformatics/btr115
PMCID:
PMC3109516
Abstract Full Text PDF–67K Supplementary Material
Comparative analysis of acute and chronic corticosteroid pharmacogenomic effects in rat liver: Transcriptional dynamics and regulatory structures
Tung T Nguyen, Richard R Almon, Debra C DuBois, William J Jusko, Ioannis P Androulakis
BMC Bioinformatics. 2010; 11: 515. Published online 2010 October 14. doi: 10.1186/1471-2105-11-515
PMCID:
PMC2973961
Abstract Full Text PDF–3.6M Supplementary Material
Dynamics of dendritic cell maturation are identified through a novel filtering strategy applied to biological time-course microarray replicates
Amy L Olex, Elizabeth M Hiltbold, Xiaoyan Leng, Jacquelyn S Fetrow
BMC Immunol. 2010; 11: 41. Published online 2010 August 3. doi: 10.1186/1471-2172-11-41
PMCID:
PMC2928180
Abstract Full Text PDF–1.6M Supplementary Material
Comparative analysis of missing value imputation methods to improve clustering and interpretation of microarray experiments
Magalie Celton, Alain Malpertuy, Gaëlle Lelandais, Alexandre G de Brevern
BMC Genomics. 2010; 11: 15. Published online 2010 January 7. doi: 10.1186/1471-2164-11-15
PMCID:
PMC2827407
Abstract Full Text PDF–1.5M Supplementary Material
ArrayMining: a modular web-application for microarray analysis combining ensemble and consensus methods with cross-study normalization
Enrico Glaab, Jonathan M Garibaldi, Natalio Krasnogor
BMC Bioinformatics. 2009; 10: 358. Published online 2009 October 28. doi: 10.1186/1471-2105-10-358
PMCID:
PMC2776026
Abstract Full Text PDF–952K Supplementary Material
MULTI-K: accurate classification of microarray subtypes using ensemble k-means clustering
Eun-Youn Kim, Seon-Young Kim, Daniel Ashlock, Dougu Nam
BMC Bioinformatics. 2009; 10: 260. Published online 2009 August 22. doi: 10.1186/1471-2105-10-260
PMCID:
PMC2743671
Abstract Full Text PDF–876K Supplementary Material
Fuzzy association rules for biological data analysis: A case study on yeast
Francisco J Lopez, Armando Blanco, Fernando Garcia, Carlos Cano, Antonio Marin
BMC Bioinformatics. 2008; 9: 107. Published online 2008 February 19. doi: 10.1186/1471-2105-9-107
PMCID:
PMC2277399
Abstract Full Text PDF–859K Supplementary Material
X Box Binding Protein XBP-1s Transactivates the Kaposi's Sarcoma-Associated Herpesvirus (KSHV) ORF50 Promoter, Linking Plasma Cell Differentiation to KSHV Reactivation from Latency
Sam J. Wilson, Edward H. Tsao, Benjamin L. J. Webb, Hongtao Ye, Lucy Dalton-Griffin, Christoforos Tsantoulas, Catherine V. Gale, Ming-Qing Du, Adrian Whitehouse, Paul Kellam
J Virol. 2007 December; 81(24): 13578–13586. Published online 2007 October 10. doi: 10.1128/JVI.01663-07
PMCID:
PMC2168861
Abstract Full Text PDF–576K
Cross-species microarray analysis with the OSCAR system suggests an INSR->Pax6->NQO1 neuro-protective pathway in aging and Alzheimer's disease
Yue Lu, Xin He, Sheng Zhong
Nucleic Acids Res. 2007 July; 35(Web Server issue): W105–W114. Published online 2007 July. doi: 10.1093/nar/gkm408
PMCID:
PMC1933158
Abstract Full Text PDF–2.1M
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