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Genomic neighborhoods for Arabidopsis retrotransposons: a role for targeted integration in the distribution of the Metaviridae
Brooke D Peterson-Burch, Dan Nettleton, Daniel F Voytas
Genome Biol. 2004; 5(10): R78. Published online 2004 September 29. doi: 10.1186/gb-2004-5-10-r78
PMCID:
PMC545598
Abstract Full Text PDF–584K Supplementary Material
 Is Cited by the Following 10 Articles in this Archive:
Plant centromeric retrotransposons: a structural and cytogenetic perspective
Pavel Neumann, Alice Navrátilová, Andrea Koblížková, Eduard Kejnovský, Eva Hřibová, Roman Hobza, Alex Widmer, Jaroslav Doležel, Jiří Macas
Mob DNA. 2011; 2: 4. Published online 2011 March 3. doi: 10.1186/1759-8753-2-4
PMCID:
PMC3059260
Abstract Full Text PDF–3.1M Supplementary Material
MOM1 and Pol-IV/V interactions regulate the intensity and specificity of transcriptional gene silencing
Chotika Yokthongwattana, Etienne Bucher, Marian Čaikovski, Isabelle Vaillant, Joël Nicolet, Ortrun Mittelsten Scheid, Jerzy Paszkowski
EMBO J. 2010 January 20; 29(2): 340–351. Published online 2009 November 12. doi: 10.1038/emboj.2009.328
PMCID:
PMC2824458
Abstract Full Text PDF–973K Supplementary Material
Rapid DNA loss as a counterbalance to genome expansion through retrotransposon proliferation in plants
Jennifer S. Hawkins, Stephen R. Proulx, Ryan A. Rapp, Jonathan F. Wendel
Proc Natl Acad Sci U S A. 2009 October 20; 106(42): 17811–17816. Published online 2009 October 7. doi: 10.1073/pnas.0904339106
PMCID:
PMC2764891
Abstract Full Text PDF–700K
Chromodomains direct integration of retrotransposons to heterochromatin
Xiang Gao, Yi Hou, Hirotaka Ebina, Henry L. Levin, Daniel F. Voytas
Genome Res. 2008 March; 18(3): 359–369. doi: 10.1101/gr.7146408
PMCID:
PMC2259100
Abstract Full Text PDF–585K
LTR retrotransposons in rice (Oryza sativa, L.): recent burst amplifications followed by rapid DNA loss
Clémentine Vitte, Olivier Panaud, Hadi Quesneville
BMC Genomics. 2007; 8: 218. Published online 2007 July 6. doi: 10.1186/1471-2164-8-218
PMCID:
PMC1940013
Abstract Full Text PDF–416K Supplementary Material
Significant Expansion of Vicia pannonica Genome Size Mediated by Amplification of a Single Type of Giant Retroelement
Pavel Neumann, Andrea Koblížková, Alice Navrátilová, Jiří Macas
Genetics. 2006 June; 173(2): 1047–1056. doi: 10.1534/genetics.106.056259
PMCID:
PMC1526492
Abstract Full Text PDF–271K
Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis
Bruno Huettel, Tatsuo Kanno, Lucia Daxinger, Werner Aufsatz, Antonius J M Matzke, Marjori Matzke
EMBO J. 2006 June 21; 25(12): 2828–2836. Published online 2006 May 25. doi: 10.1038/sj.emboj.7601150
PMCID:
PMC1500864
Abstract Full Text PDF–256K Supplementary Material
Natural Variation in a Subtelomeric Region of Arabidopsis: Implications for the Genomic Dynamics of a Chromosome End
Hui-Fen Kuo, Kenneth M. Olsen, Eric J. Richards
Genetics. 2006 May; 173(1): 401–417. doi: 10.1534/genetics.105.055202
PMCID:
PMC1461430
Abstract Full Text PDF–1023K
The Sireviruses, a Plant-Specific Lineage of the Ty1/copia Retrotransposons, Interact with a Family of Proteins Related to Dynein Light Chain 8
Ericka R. Havecker, Xiang Gao, Daniel F. Voytas
Plant Physiol. 2005 October; 139(2): 857–868. doi: 10.1104/pp.105.065680
PMCID:
PMC1256001
Abstract Full Text PDF–628K Supplementary Material
Insertion bias and purifying selection of retrotransposons in the Arabidopsis thaliana genome
Vini Pereira
Genome Biol. 2004; 5(10): R79. Published online 2004 September 29. doi: 10.1186/gb-2004-5-10-r79
PMCID:
PMC545599
Abstract Full Text PDF–324K Supplementary Material
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