pmc logo image
Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species
Michael W Rey, Preethi Ramaiya, Beth A Nelson, Shari D Brody-Karpin, Elizabeth J Zaretsky, Maria Tang, Alfredo Lopez de Leon, Henry Xiang, Veronica Gusti, Ib Groth Clausen, Peter B Olsen, Michael D Rasmussen, Jens T Andersen, Per L Jørgensen, Thomas S Larsen, Alexei Sorokin, Alexander Bolotin, Alla Lapidus, Nathalie Galleron, S Dusko Ehrlich, Randy M Berka
Genome Biol. 2004; 5(10): r77. Published online 2004 September 13. doi: 10.1186/gb-2004-5-10-r77
PMCID:
PMC545597
Abstract Full Text PDF–1.6M
 Is Cited by the Following 30 Articles in this Archive:
Lichenicidin Biosynthesis in Escherichia coli: licFGEHI Immunity Genes Are Not Essential for Lantibiotic Production or Self-Protection
Tânia Caetano, Joanna M. Krawczyk, Eva Mösker, Roderich D. Süssmuth, Sónia Mendo
Appl Environ Microbiol. 2011 July; 77(14): 5023–5026. doi: 10.1128/AEM.00270-11
PMCID:
PMC3147384
Abstract Full Text PDF–333K
Substrate Specificity of the Bacillus licheniformis Lyxose Isomerase YdaE and Its Application in In Vitro Catalysis for Bioproduction of Lyxose and Glucose by Two-Step Isomerization
Darshan H. Patel, Seung Gon Wi, Seong-Gene Lee, Dae-Seok Lee, Youn-ho Song, Hyeun-Jong Bae
Appl Environ Microbiol. 2011 May; 77(10): 3343–3350. doi: 10.1128/AEM.02693-10
PMCID:
PMC3126444
Abstract Full Text PDF–804K Supplementary Material
Genetic Improvement of Bacillus licheniformis Strains for Efficient Deproteinization of Shrimp Shells and Production of High-Molecular-Mass Chitin and Chitosan
Kerstin Hoffmann, Gabriele Daum, Marina Köster, Werner-Michael Kulicke, Heike Meyer-Rammes, Bernward Bisping, Friedhelm Meinhardt
Appl Environ Microbiol. 2010 December; 76(24): 8211–8221. Published online 2010 October 22. doi: 10.1128/AEM.01404-10
PMCID:
PMC3008253
Abstract Full Text PDF–844K Supplementary Material
Optimization of Protease Secretion in Bacillus subtilis and Bacillus licheniformis by Screening of Homologous and Heterologous Signal Peptides
Christian Degering, Thorsten Eggert, Michael Puls, Johannes Bongaerts, Stefan Evers, Karl-Heinz Maurer, Karl-Erich Jaeger
Appl Environ Microbiol. 2010 October; 76(19): 6370–6376. Published online 2010 August 13. doi: 10.1128/AEM.01146-10
PMCID:
PMC2950444
Abstract Full Text PDF–780K
Characterization of Two Paenibacillus amylolyticus Strain 27C64 Pectate Lyases with Activity on Highly Methylated Pectin
Whitney E. Boland, Emily DeCrescenzo Henriksen, Joy Doran-Peterson
Appl Environ Microbiol. 2010 September; 76(17): 6006–6009. Published online 2010 July 9. doi: 10.1128/AEM.00043-10
PMCID:
PMC2935079
Abstract Full Text PDF–576K Supplementary Material
Facilitation of Direct Conditional Knockout of Essential Genes in Bacillus licheniformis DSM13 by Comparative Genetic Analysis and Manipulation of Genetic Competence
Kerstin Hoffmann, Antje Wollherr, Michael Larsen, Michael Rachinger, Heiko Liesegang, Armin Ehrenreich, Friedhelm Meinhardt
Appl Environ Microbiol. 2010 August; 76(15): 5046–5057. Published online 2010 June 11. doi: 10.1128/AEM.00660-10
PMCID:
PMC2916460
Abstract Full Text PDF–3.8M Supplementary Material
Understanding the evolutionary relationships and major traits of Bacillus through comparative genomics
Luis David Alcaraz, Gabriel Moreno-Hagelsieb, Luis E Eguiarte, Valeria Souza, Luis Herrera-Estrella, Gabriela Olmedo
BMC Genomics. 2010; 11: 332. Published online 2010 May 26. doi: 10.1186/1471-2164-11-332
PMCID:
PMC2890564
Abstract Full Text PDF–1.7M Supplementary Material
Whole genome assembly of a natto production strain Bacillus subtilis natto from very short read data
Yukari Nishito, Yasunori Osana, Tsuyoshi Hachiya, Kris Popendorf, Atsushi Toyoda, Asao Fujiyama, Mitsuhiro Itaya, Yasubumi Sakakibara
BMC Genomics. 2010; 11: 243. Published online 2010 April 16. doi: 10.1186/1471-2164-11-243
PMCID:
PMC2867830
Abstract Full Text PDF–1.1M Supplementary Material
Transformation of Environmental Bacillus subtilis Isolates by Transiently Inducing Genetic Competence
Reindert Nijland, J. Grant Burgess, Jeff Errington, Jan-Willem Veening
PLoS One. 2010; 5(3): e9724. Published online 2010 March 16. doi: 10.1371/journal.pone.0009724
PMCID:
PMC2838798
Abstract Full Text PDF–377K
Comparative Study of the Gating Motif and C-type Inactivation in Prokaryotic Voltage-gated Sodium Channels
Katsumasa Irie, Kazuya Kitagawa, Hitoshi Nagura, Tomoya Imai, Takushi Shimomura, Yoshinori Fujiyoshi
J Biol Chem. 2010 February 5; 285(6): 3685–3694. Published online 2009 December 3. doi: 10.1074/jbc.M109.057455
PMCID:
PMC2823509
Abstract Full Text
High yield recombinant thermostable α-amylase production using an improved Bacillus licheniformis system
Dandan Niu, Zhirui Zuo, Gui-Yang Shi, Zheng-Xiang Wang
Microb Cell Fact. 2009; 8: 58. Published online 2009 October 31. doi: 10.1186/1475-2859-8-58
PMCID:
PMC2776586
Abstract Full Text PDF–560K
Functional characterization of a Na+-coupled dicarboxylate transporter from Bacillus licheniformis
Melodie A. Strickler, Jason A. Hall, Olga Gaiko, Ana M. Pajor
Biochim Biophys Acta. Author manuscript; available in PMC 2010 December 1.
Published in final edited form as: Biochim Biophys Acta. 2009 December; 1788(12): 2489–2496. Published online 2009 October 17. doi: 10.1016/j.bbamem.2009.10.008
PMCID:
PMC2787743
Abstract Full Text PDF–895K
Production of the Novel Two-Peptide Lantibiotic Lichenicidin by Bacillus licheniformis DSM 13
Jasmin Dischinger, Michaele Josten, Christiane Szekat, Hans-Georg Sahl, Gabriele Bierbaum
PLoS One. 2009; 4(8): e6788. Published online 2009 August 26. doi: 10.1371/journal.pone.0006788
PMCID:
PMC2727956
Abstract Full Text PDF–744K
Identification of a Novel Two-Peptide Lantibiotic, Lichenicidin, following Rational Genome Mining for LanM Proteins
Máire Begley, Paul D. Cotter, Colin Hill, R. Paul Ross
Appl Environ Microbiol. 2009 September; 75(17): 5451–5460. Published online 2009 June 26. doi: 10.1128/AEM.00730-09
PMCID:
PMC2737927
Abstract Full Text PDF–1.3M
Dissecting Structural and Functional Diversity of the Lantibiotic Mersacidin
Antony N. Appleyard, Shaila Choi, Daniel M. Read, Ann Lightfoot, Steven Boakes, Anja Hoffmann, Ian Chopra, Gabriele Bierbaum, Brian A.M. Rudd, Michael J. Dawson, Jesus Cortes
Chem Biol. 2009 May 29; 16(5-3): 490–498. doi: 10.1016/j.chembiol.2009.03.011
PMCID:
PMC2706954
Abstract Full Text PDF–512K Supplementary Material
Phylogeny in Aid of the Present and Novel Microbial Lineages: Diversity in Bacillus
Shalini Porwal, Sadhana Lal, Simrita Cheema, Vipin Chandra Kalia
PLoS ONE. 2009; 4(2): e4438. Published online 2009 February 12. doi: 10.1371/journal.pone.0004438
PMCID:
PMC2639701
Abstract Full Text PDF–11M Supplementary Material
A Widely Conserved Gene Cluster Required for Lactate Utilization in Bacillus subtilis and Its Involvement in Biofilm Formation
Yunrong Chai, Roberto Kolter, Richard Losick
J Bacteriol. 2009 April; 191(8): 2423–2430. Published online 2009 February 6. doi: 10.1128/JB.01464-08
PMCID:
PMC2668416
Abstract Full Text PDF–839K
Complete Genome Sequence of Macrococcus caseolyticus Strain JSCS5402, Reflecting the Ancestral Genome of the Human-Pathogenic Staphylococci
Tadashi Baba, Kyoko Kuwahara-Arai, Ikuo Uchiyama, Fumihiko Takeuchi, Teruyo Ito, Keiichi Hiramatsu
J Bacteriol. 2009 February; 191(4): 1180–1190. Published online 2008 December 12. doi: 10.1128/JB.01058-08
Correction in:
J Bacteriol. 2009 May; 191(10): 3429.
PMCID:
PMC2632007
Abstract Full Text PDF–1.0M Correction
Ecology and genomics of Bacillus subtilis
Ashlee M. Earl, Richard Losick, Roberto Kolter
Trends Microbiol. Author manuscript; available in PMC 2010 February 10.
Published in final edited form as: Trends Microbiol. 2008 June; 16(6): 269. Published online 2008 May 28. doi: 10.1016/j.tim.2008.03.004
PMCID:
PMC2819312
Abstract Full Text PDF–378K
SIGffRid: A tool to search for sigma factor binding sites in bacterial genomes using comparative approach and biologically driven statistics
Fabrice Touzain, Sophie Schbath, Isabelle Debled-Rennesson, Bertrand Aigle, Gregory Kucherov, Pierre Leblond
BMC Bioinformatics. 2008; 9: 73. Published online 2008 January 31. doi: 10.1186/1471-2105-9-73
PMCID:
PMC2375139
Abstract Full Text PDF–414K Supplementary Material
Genetic Evidence for the Actin Homolog Gene mreBH and the Bacitracin Resistance Gene bcrC as Targets of the Alternative Sigma Factor SigI of Bacillus subtilis
Chi-Ling Tseng, Gwo-Chyuan Shaw
J Bacteriol. 2008 March; 190(5): 1561–1567. Published online 2007 December 21. doi: 10.1128/JB.01497-07
PMCID:
PMC2258693
Abstract Full Text PDF–362K
Molecular and Biochemical Characterization of the Chromosome-Encoded Class A β-Lactamase BCL-1 from Bacillus clausii
Delphine Girlich, Roland Leclercq, Thierry Naas, Patrice Nordmann
Antimicrob Agents Chemother. 2007 November; 51(11): 4009–4014. Published online 2007 September 10. doi: 10.1128/AAC.00537-07
PMCID:
PMC2151419
Abstract Full Text PDF–257K
Isolation and Molecular Characterization of Chitinase-Deficient Bacillus licheniformis Strains Capable of Deproteinization of Shrimp Shell Waste To Obtain Highly Viscous Chitin
Jens Waldeck, Gabriele Daum, Bernward Bisping, Friedhelm Meinhardt
Appl Environ Microbiol. 2006 December; 72(12): 7879–7885. Published online 2006 October 6. doi: 10.1128/AEM.00938-06
PMCID:
PMC1694268
Abstract Full Text PDF–326K
Cell Envelope Stress Response in Bacillus licheniformis: Integrating Comparative Genomics, Transcriptional Profiling, and Regulon Mining To Decipher a Complex Regulatory Network
Tina Wecke, Birgit Veith, Armin Ehrenreich, Thorsten Mascher
J Bacteriol. 2006 November; 188(21): 7500–7511. Published online 2006 August 25. doi: 10.1128/JB.01110-06
PMCID:
PMC1636251
Abstract Full Text PDF–387K
Characterization of the family of Mistic homologues
Tarmo P Roosild, Mark Vega, Samantha Castronovo, Senyon Choe
BMC Struct Biol. 2006; 6: 10. Published online 2006 May 16. doi: 10.1186/1472-6807-6-10
PMCID:
PMC1471793
Abstract Full Text PDF–1.0M
ICDS database: interrupted CoDing sequences in prokaryotic genomes
Emmanuel Perrodou, Caroline Deshayes, Jean Muller, Christine Schaeffer, Alain Van Dorsselaer, Raymond Ripp, Olivier Poch, Jean-Marc Reyrat, Odile Lecompte
Nucleic Acids Res. 2006 January 1; 34(Database issue): D338–D343. Published online 2005 December 28. doi: 10.1093/nar/gkj060
PMCID:
PMC1347423
Abstract Full Text PDF–227K Supplementary Material
CapE, a 47-Amino-Acid Peptide, Is Necessary for Bacillus anthracis Polyglutamate Capsule Synthesis
Thomas Candela, Michèle Mock, Agnès Fouet
J Bacteriol. 2005 November; 187(22): 7765–7772. doi: 10.1128/JB.187.22.7765-7772.2005
PMCID:
PMC1280324
Abstract Full Text PDF–388K
YrxA Is the Transcriptional Regulator That Represses De Novo NAD Biosynthesis in Bacillus subtilis
Paola Rossolillo, Ilaria Marinoni, Elisa Galli, Anna Colosimo, Alessandra M. Albertini
J Bacteriol. 2005 October; 187(20): 7155–7160. doi: 10.1128/JB.187.20.7155-7160.2005
PMCID:
PMC1251630
Abstract Full Text PDF–160K
Proteome analysis of a recombinant Bacillus megaterium strain during heterologous production of a glucosyltransferase
Wei Wang, Rajan Hollmann, Tobias Fürch, Manfred Nimtz, Marco Malten, Dieter Jahn, Wolf-Dieter Deckwer
Proteome Sci. 2005; 3: 4. Published online 2005 May 31. doi: 10.1186/1477-5956-3-4
PMCID:
PMC1175100
Abstract Full Text PDF–714K Supplementary Material
Flavobacterium johnsoniae GldJ Is a Lipoprotein That Is Required for Gliding Motility
Timothy F. Braun, Mark J. McBride
J Bacteriol. 2005 April; 187(8): 2628–2637. doi: 10.1128/JB.187.8.2628-2637.2005
PMCID:
PMC1070399
Abstract Full Text PDF–310K
You are here: NCBI > Literature > PubMed Central
Write to the Help Desk