pmc logo image
Eugene V Koonin, Natalie D Fedorova, John D Jackson, Aviva R Jacobs, Dmitri M Krylov, Kira S Makarova, Raja Mazumder, Sergei L Mekhedov, Anastasia N Nikolskaya, B Sridhar Rao, Igor B Rogozin, Sergei Smirnov, Alexander V Sorokin, Alexander V Sverdlov, Sona Vasudevan, Yuri I Wolf, Jodie J Yin, Darren A Natale
Genome Biol. 2004; 5(2): R7. Published online 2004 January 15.
PMCID:
PMC395751
Page of 3 Next Last
 Is Cited by the Following 77 Articles in this Archive:
David M. Goodstein, Shengqiang Shu, Russell Howson, Rochak Neupane, Richard D. Hayes, Joni Fazo, Therese Mitros, William Dirks, Uffe Hellsten, Nicholas Putnam, Daniel S. Rokhsar
Nucleic Acids Res. 2012 January; 40(D1): D1178–D1186. Published online 2011 November 22. doi: 10.1093/nar/gkr944
PMCID:
PMC3245001
Igor V. Grigoriev, Henrik Nordberg, Igor Shabalov, Andrea Aerts, Mike Cantor, David Goodstein, Alan Kuo, Simon Minovitsky, Roman Nikitin, Robin A. Ohm, Robert Otillar, Alex Poliakov, Igor Ratnere, Robert Riley, Tatyana Smirnova, Daniel Rokhsar, Inna Dubchak
Nucleic Acids Res. 2012 January; 40(D1): D26–D32. Published online 2011 November 22. doi: 10.1093/nar/gkr947
PMCID:
PMC3245080
Christopher E. Ellison, Jason E. Stajich, David J. Jacobson, Donald O. Natvig, Alla Lapidus, Brian Foster, Andrea Aerts, Robert Riley, Erika A. Lindquist, Igor V. Grigoriev, John W. Taylor
Genetics. 2011 September; 189(1): 55–69. doi: 10.1534/genetics.111.130690
PMCID:
PMC3176108
Nick Lane
Biol Direct. 2011; 6: 35. Published online 2011 June 30. doi: 10.1186/1745-6150-6-35
PMCID:
PMC3152533
Stephen B. Goodwin, Sarrah Ben M'Barek, Braham Dhillon, Alexander H. J. Wittenberg, Charles F. Crane, James K. Hane, Andrew J. Foster, Theo A. J. Van der Lee, Jane Grimwood, Andrea Aerts, John Antoniw, Andy Bailey, Burt Bluhm, Judith Bowler, Jim Bristow, Ate van der Burgt, Blondy Canto-Canché, Alice C. L. Churchill, Laura Conde-Ferràez, Hans J. Cools, Pedro M. Coutinho, Michael Csukai, Paramvir Dehal, Pierre De Wit, Bruno Donzelli, Henri C. van de Geest, Roeland C. H. J. van Ham, Kim E. Hammond-Kosack, Bernard Henrissat, Andrzej Kilian, Adilson K. Kobayashi, Edda Koopmann, Yiannis Kourmpetis, Arnold Kuzniar, Erika Lindquist, Vincent Lombard, Chris Maliepaard, Natalia Martins, Rahim Mehrabi, Jan P. H. Nap, Alisa Ponomarenko, Jason J. Rudd, Asaf Salamov, Jeremy Schmutz, Henk J. Schouten, Harris Shapiro, Ioannis Stergiopoulos, Stefano F. F. Torriani, Hank Tu, Ronald P. de Vries, Cees Waalwijk, Sarah B. Ware, Ad Wiebenga, Lute-Harm Zwiers, Richard P. Oliver, Igor V. Grigoriev, Gert H. J. Kema
PLoS Genet. 2011 June; 7(6): e1002070. Published online 2011 June 9. doi: 10.1371/journal.pgen.1002070
PMCID:
PMC3111534
Mikael R. Andersen, Margarita P. Salazar, Peter J. Schaap, Peter J.I. van de Vondervoort, David Culley, Jette Thykaer, Jens C. Frisvad, Kristian F. Nielsen, Richard Albang, Kaj Albermann, Randy M. Berka, Gerhard H. Braus, Susanna A. Braus-Stromeyer, Luis M. Corrochano, Ziyu Dai, Piet W.M. van Dijck, Gerald Hofmann, Linda L. Lasure, Jon K. Magnuson, Hildegard Menke, Martin Meijer, Susan L. Meijer, Jakob B. Nielsen, Michael L. Nielsen, Albert J.J. van Ooyen, Herman J. Pel, Lars Poulsen, Rob A. Samson, Hein Stam, Adrian Tsang, Johannes M. van den Brink, Alex Atkins, Andrea Aerts, Harris Shapiro, Jasmyn Pangilinan, Asaf Salamov, Yigong Lou, Erika Lindquist, Susan Lucas, Jane Grimwood, Igor V. Grigoriev, Christian P. Kubicek, Diego Martinez, Noël N.M.E. van Peij, Johannes A. Roubos, Jens Nielsen, Scott E. Baker
Genome Res. 2011 June; 21(6): 885–897. doi: 10.1101/gr.112169.110
PMCID:
PMC3106321
Diana Chernikova, Sam Motamedi, Miklós Csürös, Eugene V Koonin, Igor B Rogozin
Biol Direct. 2011; 6: 26. Published online 2011 May 19. doi: 10.1186/1745-6150-6-26
PMCID:
PMC3125394
Rodrigo JS Dalmolin, Mauro AA Castro, José L Rybarczyk Filho, Luis HT Souza, Rita MC de Almeida, José CF Moreira
Biol Direct. 2011; 6: 22. Published online 2011 May 17. doi: 10.1186/1745-6150-6-22
PMCID:
PMC3117832
Hiroaki Iwata, Osamu Gotoh
BMC Genomics. 2011; 12: 45. Published online 2011 January 19. doi: 10.1186/1471-2164-12-45
PMCID:
PMC3033335
Chong Shou, Nitin Bhardwaj, Hugo Y. K. Lam, Koon-Kiu Yan, Philip M. Kim, Michael Snyder, Mark B. Gerstein
PLoS Comput Biol. 2011 January; 7(1): e1001050. Published online 2011 January 6. doi: 10.1371/journal.pcbi.1001050
PMCID:
PMC3017101
Aminael Sánchez-Rodríguez, Cindy Martens, Kristof Engelen, Yves Van de Peer, Kathleen Marchal
BMC Evol Biol. 2010; 10: 318. Published online 2010 October 21. doi: 10.1186/1471-2148-10-318
PMCID:
PMC3087541
Christoph P Bagowski, Wouter Bruins, Aartjan J.W te Velthuis
Curr Genomics. 2010 August; 11(5): 368–376. doi: 10.2174/138920210791616725
PMCID:
PMC2945003
Eugene V Koonin
Genome Biol. 2010; 11(5): 209. Published online 2010 May 5. doi: 10.1186/gb-2010-11-5-209
PMCID:
PMC2898073
Alexander E. Vinogradov
Proc Biol Sci. 2010 May 7; 277(1686): 1403–1408. Published online 2010 January 6. doi: 10.1098/rspb.2009.1865
PMCID:
PMC2871935
Krzysztof Kuchta, Lukasz Knizewski, Lucjan S. Wyrwicz, Leszek Rychlewski, Krzysztof Ginalski
Nucleic Acids Res. 2009 December; 37(22): 7701–7714. Published online 2009 December. doi: 10.1093/nar/gkp854
PMCID:
PMC2794190
Valentín Ruano-Rubio, Olivier Poch, Julie D Thompson
BMC Bioinformatics. 2009; 10: 383. Published online 2009 November 24. doi: 10.1186/1471-2105-10-383
PMCID:
PMC2787529
John W Stiller, Jinling Huang, Qin Ding, Jing Tian, Carol Goodwillie
BMC Genomics. 2009; 10: 484. Published online 2009 October 20. doi: 10.1186/1471-2164-10-484
PMCID:
PMC2770532
Jeffrey J. Coleman, Steve D. Rounsley, Marianela Rodriguez-Carres, Alan Kuo, Catherine C. Wasmann, Jane Grimwood, Jeremy Schmutz, Masatoki Taga, Gerard J. White, Shiguo Zhou, David C. Schwartz, Michael Freitag, Li-jun Ma, Etienne G. J. Danchin, Bernard Henrissat, Pedro M. Coutinho, David R. Nelson, Dave Straney, Carolyn A. Napoli, Bridget M. Barker, Michael Gribskov, Martijn Rep, Scott Kroken, István Molnár, Christopher Rensing, John C. Kennell, Jorge Zamora, Mark L. Farman, Eric U. Selker, Asaf Salamov, Harris Shapiro, Jasmyn Pangilinan, Erika Lindquist, Casey Lamers, Igor V. Grigoriev, David M. Geiser, Sarah F. Covert, Esteban Temporini, Hans D. VanEtten
PLoS Genet. 2009 August; 5(8): e1000618. Published online 2009 August 28. doi: 10.1371/journal.pgen.1000618
PMCID:
PMC2725324
Bernd W. Brandt, Jaap Heringa
Nucleic Acids Res. 2009 July 1; 37(Web Server issue): W48–W52. Published online 2009 July 1. doi: 10.1093/nar/gkp279
PMCID:
PMC2703954
Nir Yosef, Martin Kupiec, Eytan Ruppin, Roded Sharan
Nucleic Acids Res. 2009 July; 37(12): e88. Published online 2009 July. doi: 10.1093/nar/gkp414
PMCID:
PMC2709590
Igor B. Rogozin, Malay Kumar Basu, Miklós Csürös, Eugene V. Koonin
Genome Biol Evol. 2009; 1: 99–113. Published online 2009 May 25. doi: 10.1093/gbe/evp011
PMCID:
PMC2817406
Xin Wang, Yongjun Zhao, Kim Wong, Peter Ehlers, Yuji Kohara, Steven J Jones, Marco A Marra, Robert A Holt, Donald G Moerman, Dave Hansen
BMC Genomics. 2009; 10: 213. Published online 2009 May 9. doi: 10.1186/1471-2164-10-213
PMCID:
PMC2686737
Takao Kasuga, Gertrud Mannhaupt, N. Louise Glass
PLoS ONE. 2009; 4(4): e5286. Published online 2009 April 21. doi: 10.1371/journal.pone.0005286
PMCID:
PMC2684829
Mark E Peterson, Feng Chen, Jeffery G Saven, David S Roos, Patricia C Babbitt, Andrej Sali
Protein Sci. 2009 June; 18(6): 1306–1315. Published online 2009 April 16. doi: 10.1002/pro.143
PMCID:
PMC2774440
Yuri I. Wolf, Pavel S. Novichkov, Georgy P. Karev, Eugene V. Koonin, David J. Lipman
Proc Natl Acad Sci U S A. 2009 May 5; 106(18): 7273–7280. Published online 2009 April 7. doi: 10.1073/pnas.0901808106
PMCID:
PMC2666616
Sabine P Schrimpf, Manuel Weiss, Lukas Reiter, Christian H Ahrens, Marko Jovanovic, Johan Malmström, Erich Brunner, Sonali Mohanty, Martin J Lercher, Peter E Hunziker, Ruedi Aebersold, Christian von Mering, Michael O Hengartner
PLoS Biol. 2009 March; 7(3): e1000048. Published online 2009 March 3. doi: 10.1371/journal.pbio.1000048
PMCID:
PMC2650730
Eugene V. Koonin
Nucleic Acids Res. 2009 March; 37(4): 1011–1034. Published online 2009 March. doi: 10.1093/nar/gkp089
PMCID:
PMC2651812
Taishi Umezawa, Tetsuya Sakurai, Yasushi Totoki, Atsushi Toyoda, Motoaki Seki, Atsushi Ishiwata, Kenji Akiyama, Atsushi Kurotani, Takuhiro Yoshida, Keiichi Mochida, Mie Kasuga, Daisuke Todaka, Kyonoshin Maruyama, Kazuo Nakashima, Akiko Enju, Saho Mizukado, Selina Ahmed, Kyoko Yoshiwara, Kyuya Harada, Yasutaka Tsubokura, Masaki Hayashi, Shusei Sato, Toyoaki Anai, Masao Ishimoto, Hideyuki Funatsuki, Masayoshi Teraishi, Mitsuru Osaki, Takuro Shinano, Ryo Akashi, Yoshiyuki Sakaki, Kazuko Yamaguchi-Shinozaki, Kazuo Shinozaki
DNA Res. 2008 December; 15(6): 333–346. Published online 2008 October 16. doi: 10.1093/dnares/dsn024
PMCID:
PMC2608845
Maxim Y Wolf, Yuri I Wolf, Eugene V Koonin
Biol Direct. 2008; 3: 40. Published online 2008 October 7. doi: 10.1186/1745-6150-3-40
PMCID:
PMC2572155
Raja Mazumder, Sona Vasudevan
PLoS Comput Biol. 2008 September; 4(9): e1000151. Published online 2008 September 26. doi: 10.1371/journal.pcbi.1000151
PMCID:
PMC2515338
Page of 3 Next Last