My NCBISign In
MicroRNA targets in Drosophila
Anton J Enright, Bino John, Ulrike Gaul, Thomas Tuschl, Chris Sander, Debora S Marks
Genome Biol. 2004; 5(1): R1. Published online 2003 December 12.
PMCID:
PMC395733
Abstract Full Text PDF–1.3M Supplementary Material

Is Cited by the Following 261 Articles in this Archive:

Ssa miRNAs DB: Online repository of in silico predicted miRNAs in Salmo salar
Daniela Reyes, Victoria Cepeda, Ruth González, Rodrigo Vidal
Bioinformation. 2012; 8(6): 284–286. Published online 2012 March 31. doi: 10.6026/97320630008284
PMCID:
PMC3321240
Abstract Full Text PDF–213K
Bioinformatic Resources of microRNA Sequences, Gene Targets, and Genetic Variation
Wenbo Mu, Wei Zhang
Front Genet. 2012; 3: 31. Prepublished online 2012 February 2. Published online 2012 March 5. doi: 10.3389/fgene.2012.00031
PMCID:
PMC3293225
Abstract Full Text PDF–328K
Three Drosophila Hox Complex microRNAs Do Not Have Major Effects on Expression of Evolutionarily Conserved Hox Gene Targets during Embryogenesis
Derek Lemons, Adam Paré, William McGinnis
PLoS One. 2012; 7(2): e31365. Published online 2012 February 29. doi: 10.1371/journal.pone.0031365
PMCID:
PMC3290615
Abstract Full Text PDF–942K Supplementary Material
Optimal Use of Conservation and Accessibility Filters in MicroRNA Target Prediction
Ray M. Marín, Jiří Vaníček
PLoS One. 2012; 7(2): e32208. Published online 2012 February 27. doi: 10.1371/journal.pone.0032208
PMCID:
PMC3288066
Abstract Full Text PDF–766K Supplementary Material
Bioinformatic identification of cassava miRNAs differentially expressed in response to infection by Xanthomonas axonopodis pv. manihotis
Álvaro L Pérez-Quintero, Andrés Quintero, Oscar Urrego, Pablo Vanegas, Camilo López
BMC Plant Biol. 2012; 12: 29. Published online 2012 February 23. doi: 10.1186/1471-2229-12-29
PMCID:
PMC3337288
Abstract Full Text PDF–600K Supplementary Material
Identification of links between small molecules and miRNAs in human cancers based on transcriptional responses
Wei Jiang, Xiaowen Chen, Mingzhi Liao, Wei Li, Baofeng Lian, Lihong Wang, Fanlin Meng, Xinyi Liu, Xiujie Chen, Yan Jin, Xia Li
Sci Rep. 2012; 2: 282. Published online 2012 February 21. doi: 10.1038/srep00282
PMCID:
PMC3282946
Abstract Full Text PDF–1.0M Supplementary Material
Microbial Pattern Recognition Causes Distinct Functional Micro-RNA Signatures in Primary Human Monocytes
Robert Häsler, Gunnar Jacobs, Andreas Till, Nils Grabe, Christian Cordes, Susanna Nikolaus, Kaiqin Lao, Stefan Schreiber, Philip Rosenstiel
PLoS One. 2012; 7(2): e31151. Published online 2012 February 17. doi: 10.1371/journal.pone.0031151
PMCID:
PMC3281918
Abstract Full Text PDF–1.4M Supplementary Material
miRdSNP: a database of disease-associated SNPs and microRNA target sites on 3'UTRs of human genes
Andrew E Bruno, Li Li, James L Kalabus, Yuzhuo Pan, Aiming Yu, Zihua Hu
BMC Genomics. 2012; 13: 44. Published online 2012 January 25. doi: 10.1186/1471-2164-13-44
PMCID:
PMC3287127
Abstract Full Text PDF–1.1M
Pseudorabies Virus Infected Porcine Epithelial Cell Line Generates a Diverse Set of Host MicroRNAs and a Special Cluster of Viral MicroRNAs
Yi-Quan Wu, Di-Jun Chen, Hua-Bin He, Dong-Sheng Chen, Ling-Ling Chen, Huan-Chun Chen, Zheng-Fei Liu
PLoS One. 2012; 7(1): e30988. Published online 2012 January 23. doi: 10.1371/journal.pone.0030988
PMCID:
PMC3264653
Abstract Full Text PDF–2.0M Supplementary Material
Accurate microRNA Target Prediction Using Detailed Binding Site Accessibility and Machine Learning on Proteomics Data
Martin Reczko, Manolis Maragkakis, Panagiotis Alexiou, Giorgio L. Papadopoulos, Artemis G. Hatzigeorgiou
Front Genet. 2011; 2: 103. Prepublished online 2011 November 9. Published online 2012 January 18. doi: 10.3389/fgene.2011.00103
PMCID:
PMC3265086
Abstract Full Text PDF–1.3M
MiR-365 regulates lung cancer and developmental gene thyroid transcription factor 1
Ji Qi, Shawn J Rice, Anna C Salzberg, E Aaron Runkle, Jason Liao, Dani S Zander, David Mu
Cell Cycle. 2012 January 1; 11(1): 177–186. Published online 2012 January 1. doi: 10.4161/cc.11.1.18576
PMCID:
PMC3272236
Free in PMC on 2013/01/01
Translational Regulation of Utrophin by miRNAs
Utpal Basu, Olga Lozynska, Catherine Moorwood, Gopal Patel, Steve D. Wilton, Tejvir S. Khurana
PLoS One. 2011; 6(12): e29376. Published online 2011 December 27. doi: 10.1371/journal.pone.0029376
PMCID:
PMC3246502
Abstract Full Text PDF–634K Supplementary Material
Identification of cis-Regulatory Elements in the dmyc Gene of Drosophila Melanogaster
Jasmine Kharazmi, Cameron Moshfegh, Thomas Brody
Gene Regul Syst Bio. 2012; 6: 15–42. Published online 2011 December 21. doi: 10.4137/GRSB.S8044
PMCID:
PMC3256997
Abstract Full Text PDF–5.8M Supplementary Material
Comparative Genomics of the Anopheline Glutathione S-Transferase Epsilon Cluster
Constância Ayres, Pie Müller, Naomi Dyer, Craig Wilding, Daniel Rigden, Martin Donnelly
PLoS One. 2011; 6(12): e29237. Published online 2011 December 19. doi: 10.1371/journal.pone.0029237
Correction in:
PLoS One. 2012; 7(1): 10.1371/annotation/1dbf46fc-3f3f-47d0-9605-514bda135ba4.
Correction in:
PLoS One. 2012; 7(1): 10.1371/annotation/02a173a2-0473-49b9-a18e-6e530508640f.
PMCID:
PMC3242777
Abstract Full Text PDF–980K Supplementary Material Correction Correction
Aberrant epigenetic grooming of miRNAs in pancreatic cancer: a systems biology perspective
Asfar S Azmi, Frances WJ Beck, Bin Bao, Ramzi M Mohammad, Fazlul H Sarkar
Epigenomics. Author manuscript; available in PMC 2012 October 1.
Published in final edited form as: Epigenomics. 2011 December; 3(6): 747–759. doi: 10.2217/epi.11.97
PMCID:
PMC3243906
Free in PMC on 2012/10/01
Distinct Roles of MicroRNA-1 and -499 in Ventricular Specification and Functional Maturation of Human Embryonic Stem Cell-Derived Cardiomyocytes
Ji-Dong Fu, Stephanie N. Rushing, Deborah K. Lieu, Camie W. Chan, Chi-Wing Kong, Lin Geng, Kitchener D. Wilson, Nipavan Chiamvimonvat, Kenneth R. Boheler, Joseph C. Wu, Gordon Keller, Roger J. Hajjar, Ronald A. Li
PLoS One. 2011; 6(11): e27417. Published online 2011 November 16. doi: 10.1371/journal.pone.0027417
PMCID:
PMC3217986
Abstract Full Text PDF–1.4M Supplementary Material
Mutation Altering the miR-184 Seed Region Causes Familial Keratoconus with Cataract
Anne E. Hughes, Declan T. Bradley, Malcolm Campbell, Judith Lechner, Durga P. Dash, David A. Simpson, Colin E. Willoughby
Am J Hum Genet. 2011 November 11; 89(5): 628–633. doi: 10.1016/j.ajhg.2011.09.014
PMCID:
PMC3213395
Abstract Full Text PDF–717K Supplementary Material
Mutagen-Specific Mutation Signature Determines Global microRNA Binding
Eyal Greenberg, Gideon Rechavi, Ninette Amariglio, Oz Solomon, Jacob Schachter, Gal Markel, Eran Eyal
PLoS One. 2011; 6(11): e27400. Published online 2011 November 9. doi: 10.1371/journal.pone.0027400
PMCID:
PMC3212558
Abstract Full Text PDF–940K Supplementary Material
Upregulation of Cyclin B1 by miRNA and its implications in cancer
Vera Huang, Robert F. Place, Victoria Portnoy, Ji Wang, Zhongxia Qi, Zhejun Jia, Angela Yu, Marc Shuman, Jingwei Yu, Long-Cheng Li
Nucleic Acids Res. 2012 February; 40(4): 1695–1707. Published online 2011 November 2. doi: 10.1093/nar/gkr934
PMCID:
PMC3287204
Abstract Full Text PDF–5.5M Supplementary Material
An Integrated Analysis of miRNA and mRNA Expressions in Non-Small Cell Lung Cancers
Lina Ma, Yanyan Huang, Wangyu Zhu, Shiquan Zhou, Jihang Zhou, Fang Zeng, Xiaoguang Liu, Yongkui Zhang, Jun Yu
PLoS One. 2011; 6(10): e26502. Published online 2011 October 27. doi: 10.1371/journal.pone.0026502
PMCID:
PMC3203153
Abstract Full Text PDF–612K Supplementary Material
An Extensive MicroRNA-Mediated Network of RNA-RNA Interactions Regulates Established Oncogenic Pathways in Glioblastoma
Pavel Sumazin, Xuerui Yang, Hua-Sheng Chiu, Wei-Jen Chung, Archana Iyer, David Llobet-Navas, Presha Rajbhandari, Mukesh Bansal, Paolo Guarnieri, Jose Silva, Andrea Califano
Cell. Author manuscript; available in PMC 2012 October 14.
Published in final edited form as: Cell. 2011 October 14; 147(2): 370–381. doi: 10.1016/j.cell.2011.09.041
PMCID:
PMC3214599
Free in PMC on 2012/10/14
A Long Noncoding RNA Controls Muscle Differentiation by Functioning as a Competing Endogenous RNA
Marcella Cesana, Davide Cacchiarelli, Ivano Legnini, Tiziana Santini, Olga Sthandier, Mauro Chinappi, Anna Tramontano, Irene Bozzoni
Cell. 2011 October 14; 147(2): 358–369. doi: 10.1016/j.cell.2011.09.028
PMCID:
PMC3234495
Abstract Full Text Supplementary Material
Convergence of miRNA Expression Profiling, α-Synuclein Interacton and GWAS in Parkinson's Disease
Madalena Martins, Alexandra Rosa, Leonor C. Guedes, Benedita V. Fonseca, Kristina Gotovac, Sara Violante, Tiago Mestre, Miguel Coelho, Mário M. Rosa, Eden R. Martin, Jeffery M. Vance, Tiago F. Outeiro, Liyong Wang, Fran Borovecki, Joaquim J. Ferreira, Sofia A. Oliveira
PLoS One. 2011; 6(10): e25443. Published online 2011 October 7. doi: 10.1371/journal.pone.0025443
PMCID:
PMC3189215
Abstract Full Text PDF–246K Supplementary Material
Alzheimer-specific variants in the 3'UTR of Amyloid precursor protein affect microRNA function
Charlotte Delay, Frédéric Calon, Paul Mathews, Sébastien S Hébert
Mol Neurodegener. 2011; 6: 70. Published online 2011 October 7. doi: 10.1186/1750-1326-6-70
PMCID:
PMC3195754
Abstract Full Text PDF–1.5M
miRNA Alterations Modify Kinase Activation In The IGF-1 Pathway And Correlate With Colorectal Cancer Stage And Progression In Patients
David L. Knowlton, Kim Tang, Peter V. Henstock, Romesh R. Subramanian
J Cancer. 2011; 2: 490–502. Published online 2011 October 1.
PMCID:
PMC3187934
Abstract Full Text PDF–2.0M
miRNA-mediated feedback inhibition of JAK/STAT morphogen signaling establishes a cell fate threshold
Wan Hee Yoon, Hans Meinhardt, Denise J. Montell
Nat Cell Biol. Author manuscript; available in PMC 2012 March 1.
Published in final edited form as: Nat Cell Biol. 2011 August 21; 13(9): 1062–1069. doi: 10.1038/ncb2316
PMCID:
PMC3167036
Full Text PDF–1.8M Supplementary Material
MIRTFnet: Analysis of miRNA Regulated Transcription Factors
Haroon Naeem, Robert Küffner, Ralf Zimmer
PLoS One. 2011; 6(8): e22519. Published online 2011 August 17. doi: 10.1371/journal.pone.0022519
PMCID:
PMC3157336
Abstract Full Text PDF–609K Supplementary Material
miR-107 promotes tumor progression by targeting the let-7 microRNA in mice and humans
Pai-Sheng Chen, Jen-Liang Su, Shih-Ting Cha, Woan-Yuh Tarn, Ming-Yang Wang, Hsing-Chih Hsu, Ming-Tsan Lin, Chia-Yu Chu, Kuo-Tai Hua, Chiung-Nien Chen, Tsang-Chih Kuo, King-Jen Chang, Michael Hsiao, Yi-Wen Chang, Jin-Shing Chen, Pan-Chyr Yang, Min-Liang Kuo
J Clin Invest. 2011 September 1; 121(9): 3442–3455. Published online 2011 August 15. doi: 10.1172/JCI45390
PMCID:
PMC3163949
Abstract Full Text PDF–3.3M Supplementary Material
Identifying transcriptional start sites of human microRNAs based on high-throughput sequencing data
Chia-Hung Chien, Yi-Ming Sun, Wen-Chi Chang, Pei-Yun Chiang-Hsieh, Tzong-Yi Lee, Wei-Chih Tsai, Jorng-Tzong Horng, Ann-Ping Tsou, Hsien-Da Huang
Nucleic Acids Res. 2011 November; 39(21): 9345–9356. Published online 2011 August 5. doi: 10.1093/nar/gkr604
PMCID:
PMC3241639
Abstract Full Text PDF–5.3M Supplementary Material
Analysis of the melon (Cucumis melo) small RNAome by high-throughput pyrosequencing
Daniel Gonzalez-Ibeas, José Blanca, Livia Donaire, Montserrat Saladié, Albert Mascarell-Creus, Ana Cano-Delgado, Jordi Garcia-Mas, Cesar Llave, Miguel A Aranda
BMC Genomics. 2011; 12: 393. Published online 2011 August 3. doi: 10.1186/1471-2164-12-393
PMCID:
PMC3163571
Abstract Full Text PDF–1.1M Supplementary Material
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