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Expression microarray reproducibility is improved by optimising purification steps in RNA amplification and labelling
Ali Naderi, Ahmed A Ahmed, Nuno L Barbosa-Morais, Samuel Aparicio, James D Brenton, Carlos Caldas
BMC Genomics. 2004; 5: 9. Published online 2004 January 30. doi: 10.1186/1471-2164-5-9
PMCID:
PMC343272
Abstract Full Text PDF–647K
 Is Cited by the Following 10 Articles in this Archive:
Plasticity of the Systemic Inflammatory Response to Acute Infection during Critical Illness: Development of the Riboleukogram
Jonathan E. McDunn, Kareem D. Husain, Ashoka D. Polpitiya, Anton Burykin, Jianhua Ruan, Qing Li, William Schierding, Nan Lin, David Dixon, Weixiong Zhang, Craig M. Coopersmith, W. Michael Dunne, Marco Colonna, Bijoy K. Ghosh, J. Perren Cobb
PLoS ONE. 2008; 3(2): e1564. Published online 2008 February 13. doi: 10.1371/journal.pone.0001564
PMCID:
PMC2215774
Abstract Full Text PDF–703K Supplementary Material
Unravelling the molecular control of calvarial suture fusion in children with craniosynostosis
Anna K Coussens, Christopher R Wilkinson, Ian P Hughes, C Phillip Morris, Angela van Daal, Peter J Anderson, Barry C Powell
BMC Genomics. 2007; 8: 458. Published online 2007 December 12. doi: 10.1186/1471-2164-8-458
PMCID:
PMC2222648
Abstract Full Text PDF–3.2M Supplementary Material
Evaluation of Global RNA Amplification and Its Use for High-Throughput Transcript Analysis of Laser-Microdissected Endosperm
Robert C. Day, Les McNoe, Richard C. Macknight
Int J Plant Genomics. 2007; 2007: 61028. Published online 2007 April 10. doi: 10.1155/2007/61028
PMCID:
PMC1939914
Abstract Full Text PDF–3.0M Supplementary Material
A consensus prognostic gene expression classifier for ER positive breast cancer
Andrew E Teschendorff, Ali Naderi, Nuno L Barbosa-Morais, Sarah E Pinder, Ian O Ellis, Sam Aparicio, James D Brenton, Carlos Caldas
Genome Biol. 2006; 7(10): R101. Published online 2006 October 31. doi: 10.1186/gb-2006-7-10-r101
PMCID:
PMC1794561
Abstract Full Text PDF–1.0M Supplementary Material
Improvement in the Reproducibility and Accuracy of DNA Microarray Quantification by Optimizing Hybridization Conditions
Tao Han, Cathy D Melvin, Leming Shi, William S Branham, Carrie L Moland, P Scott Pine, Karol L Thompson, James C Fuscoe
BMC Bioinformatics. 2006; 7(Suppl 2): S17. Published online 2006 September 26. doi: 10.1186/1471-2105-7-S2-S17
PMCID:
PMC1683572
Abstract Full Text PDF–398K
Options available for profiling small samples: a review of sample amplification technology when combined with microarray profiling
Vigdis Nygaard, Eivind Hovig
Nucleic Acids Res. 2006; 34(3): 996–1014. Published online 2006 February 9. doi: 10.1093/nar/gkj499
PMCID:
PMC1363777
Abstract Full Text PDF–206K
Prognostic Gene Expression Signatures Can Be Measured in Tissues Collected in RNAlater Preservative
Dondapati Chowdary, Jessica Lathrop, Joanne Skelton, Kathleen Curtin, Thomas Briggs, Yi Zhang, Jack Yu, Yixin Wang, Abhijit Mazumder
J Mol Diagn. 2006 February; 8(1): 31–39. doi: 10.2353/jmoldx.2006.050056
PMCID:
PMC1867564
Abstract Full Text PDF–1.6M
PCR inhibition by reverse transcriptase leads to an overestimation of amplification efficiency
Oleg Suslov, Dennis A. Steindler
Nucleic Acids Res. 2005; 33(20): e181. Published online 2005 November 27. doi: 10.1093/nar/gni176
PMCID:
PMC1298932
Abstract Full Text PDF–381K Supplementary Material
Limitations of mRNA amplification from small-size cell samples
Vigdis Nygaard, Marit Holden, Anders Løland, Mette Langaas, Ola Myklebost, Eivind Hovig
BMC Genomics. 2005; 6: 147. Published online 2005 October 27. doi: 10.1186/1471-2164-6-147
PMCID:
PMC1310617
Abstract Full Text PDF–595K
Microarrays and breast cancer clinical studies: forgetting what we have not yet learnt
Ahmed Ashour Ahmed, James D Brenton
Breast Cancer Res. 2005; 7(3): 96–99. Published online 2005 April 1. doi: 10.1186/bcr1017
PMCID:
PMC1143564
Abstract Full Text PDF–51K
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