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PLoS One. 2012; 7(4): e35902.
Published online Apr 27, 2012. doi:  10.1371/journal.pone.0035902
PMCID: PMC3338759

IFN-λ3 Inhibits HIV Infection of Macrophages through the JAK-STAT Pathway

Jialin Charles Zheng, Editor

Abstract

Background

Interferon lambda 3 (IFN-λ3) is a newly identified cytokine with antiviral activity, and its single nucleotide polymorphisms are strongly associated with the treatment effectiveness and development of chronic hepatitis C virus infection. We thus examined the potential of IFN-λ3 to inhibit HIV replication and the possible mechanisms of the anti-HIV action by IFN-λ3 in human macrophages.

Principal Findings

Under different conditions (before, during, and after HIV infection), IFN-λ3 significantly inhibited viral replication in macrophages, which was associated with the induction of multiple antiviral cellular factors (ISG56, MxA, OAS-1, A3G/F and tetherin) and IFN regulatory factors (IRF-1, 3, 5, 7 and 9). This anti-HIV action of IFN-λ3 could be compromised by the JAK-STAT inhibitor. In addition, IFN-λ3 treatment of macrophages induced the expression of toll-like receptor 3 (TLR3) and two key adaptors (MyD88 and TRIF) in type I IFN pathway activation. However, HIV infection compromised IFN-λ3-mediated induction of the key elements in JAK-STAT signaling pathway.

Conclusions

These data indicate that IFN-λ3 exerts its anti-HIV function by activating JAK-STAT pathway-mediated innate immunity in macrophages. Future in vivo studies are necessary in order to explore the potential for developing IFN-λ3-based therapy for HIV disease.

Introduction

Interferon lambdas (IFN-λs) are a class of newly identified members of IFN family. IFN-λ subfamily is comprised of three structurally related cytokines (IFN-λ1, IFN-λ2, IFN-λ3), which are also called interleukin-29 and interleukin-28A/B (IL-29, IL-28A, IL-28B), respectively [1], [2]. IFN-λ could be activated following viral infections or activation of toll-like receptors (TLRs) [3], [4]. The expression of IFN-λ can induce antiviral factors to suppress the replication of broad spectrum of viruses [4]. IFN-λ functionally resembles type I IFNs, inducing antiviral protection in vitro [1], [2], [5], [6] as well as in vivo [7]. However, unlike type I IFN receptors that are broadly expressed on most cell types, including cells in the brain, the expression pattern of the IFN-λ receptors is more cell-specific. Thus IFN-λ has fewer side effects than IFN-α [8], which is considered as a significant advantage over IFN-α. IFN-λ binds to its two receptors, which activates JAK-STAT signaling pathway, resulting in the phosphorylation of STAT proteins and forming of ISGF3 complex [9]. The formed ISGF3 complex binds to the IFN-stimulated response element (ISRE) and induces host responses to viral infections [10]. The potential clinical importance of IFN-λ as a novel antiviral therapeutic agent has recently become apparent. Several groups [11][14] reported that the endogenous IFN-λ system is associated with treatment-induced clearance of hepatitis C virus (HCV). This finding has further promoted interest in studying the antiviral mechanisms of IFN-λ, particularly IFN-λ3.

Although it has been reported that two members of IFN-λ family, IFN-λ1 and IFN-λ2, could inhibit HIV replication in macrophages [6], it is unclear, however, whether IFN-λ3 possesses the anti-HIV function as well. In this study, we examined whether IFN-λ3 has the antiviral ability against HIV infection of macrophages. We also examined the mechanisms involved in IFN-λ3-mediated actions against HIV.

Materials and Methods

Cells and viruses

Peripheral blood samples were obtained from healthy donors and tested for HIV antibody. The Institutional Review Board of the Temple University approved this research, and written informed consents were obtained from all the subjects. All investigations have been conducted according to the principles expressed in the Declaration of Helsinki. PBMCs were isolated by Ficoll gradient, and further incubated with Dulbecco's modified Eagle medium (DMEM) in gelatin-coated flasks for 45 min in 37°C to collect monocytes. After detachment with 10 mM EDTA, monocytes were washed with DMEM and resuspended in 10% DMEM including 10% fetal bovine serum, glutamine (2 mmol/ml), penicillin (100 U/ml), streptomycin (100 µg/ml), and nonessential amino acids. Monocytes purification were determined by nonspecific esterase staining and fluorescence-activated cell sorting analysis with a monoclonal antibody against CD14 (Leu-M3) and low-density lipoprotein specific for monocytes and macrophages [6]. Monocytes were seeded in 96-well-plate (105 cells/well), or 48-well-plate (2.5×105 cells/well), and differentiated to macrophages after cultured for 7 days. HIV Bal strain (R5) was obtained from the AIDS Research and Reference Reagent Program, National Institutes of Health (Bethesda, MD).

Reagents

Recombinant human IFN-λ1 and IFN-λ2 were purchased from PeproTech Inc. (Rocky Hill, NJ). Recombinant human IFN-λ3 was purchased from R&D Systems, Inc. (Minneapolis, MN), the purity of IFN-λ3 is similar to that of IFN-λ1 and IFN-λ2. JAK inhibitor I was purchased from EMD Chemicals, Inc. (Gibbstown, NJ), and dissolved in 1% dimethyl sufoxide (DMSO). HIV p24 monoclonal antibody was obtained from NIH AIDA Research & Reference Reagent Program.

HIV infection and IFN-λ treatment

Seven-day-cultured macrophages were incubated with IFN-λ either 24 h prior to HIV Bal infection, or simultaneously with HIV infection, or 4 days after HIV infection. The productive HIV infection was determined at day 12 postinfection. In the experiments where the dose and time effects of IFN-λ3 were examined, IFN-λ3 was added to the cultures 4 days postinfection and continuously presented in the cultures. In order to determine the role of JAK-STAT pathway in the IFN-λ3 action against HIV, JAK inhibitor I was added to cell culture 1 h prior to IFN-λ3 treatment.

Reverse transcriptase (RT) activity assay

HIV RT activity was determined with the technique of Willey et al. [15] with some modifications [6], [16]. Briefly, 10 µl of supernatant collected from HIV-infected macrophages cultures were added to 50 µl of cocktail containing poly (A), oligo (dT), MgCl2, Nonidet P-40, and [32P] dTTP and incubated overnight at 37°C. Thirty microliters of the reaction mixture was spotted on DE 81 paper and air dried. The filters were then washed for four times in fresh standard saline citrate (SSC, contained with 0.3 mol/liter NaCl, 0.03 mol/liter sodium citrate, PH 7) and 100% ethanol. After dried, the filters were placed into the scintillation vials and measured for radioactivity by liquid scintillation analyzer (PerkinElmer Tri-Carb 2810TR, Downers Grove, IL60515, USA).

RNA extraction and real-time RT-PCR

Total cellular nucleotide was extracted from macrophages using TRI® Reagent (SIGMA-ALDRICH, Inc. St. Louis, MO 63178, USA) as described previously [6]. Total RNA (1 µg) was subjected to the reverse transcription using the RT system (Promega, Madison, WI) for 1 h at 42°C. The resulting cDNA was used as a template for real-time PCR quantification. Using the iQ SYBR Green supermix (Bio-Rad Laboratories, Hercules, California), messenger RNAs (mRNAs) in macrophages were detected for antiviral factors (interferon-stimulated gene 56 (ISG-56), myxovirus resistance-1 (MxA), obstructive sleep apnoea-1 (OAS-1), APOBEC3G/APOBEC3F (A3G/F), tetherin, IFN regulatory factor (IRF)-1, IRF-3, IRF-5, IRF-7, IRF-9, toll-like receptor (TLR)-3, TLR-7, TLR-9, IFN-λ3 receptors (IL-28Rα, IL-10Rβ), IFN-λ3 signal pathway cytokines (Myeloid differentiation primary response gene 88 (MyD88), TIR-domain-containing adapter-inducing interferon-β (TRIF), signal transducer and activator of transcription (STAT-1/2)) and glyceraldehydes 3-phosphate dehydrogenase (GAPDH). The primers used for the parameters above were listed in Table 1. The levels of GAPDH mRNA were used as an endogenous reference to normalize the quantities of target mRNA and presented as the change in induction relative to that of untreated control cells.

Table 1
Primers for Real-time PCR.

Indirect immunofluorescence assay for HIV p24

HIV Bal-infected macrophages treated with or without IFN-λ3 were washed with phosphate-buffered saline (PBS) and fixed in 4% paraformaldehyde (EM Science) for 20 min at room temperature. The cells were then permeabilized with 0.2% Triton for 10 min, and blocked in blocking solution (10% fetal calf serum, 1% penicillin/streptomylin, and 0.05% sodium azide in MEM) for 1 h. HIV p24 antigen was detected using mouse monoclonal anti-HIV-p24 antibody and goat-anti mouse antibody conjugated with Alexa Fluor 488 (Invitrogen). The cell nuclei were counterstained with Hoechst dye. Microscopic analysis was performed with a fluorescence microscope (Olympus).

Statistical analysis

Where appropriate, data were expressed as means ± standard deviations (SD) of at least three samples replicates. Data analysis was performed using a 2-tailed Student's t-test. Statistical analyses were performed with Graphpad Instat Statistical Software (Graphpad Software Inc., San Diego, CA), and the statistical significance was defined as P<0.05.

Results

IFN-λ3 inhibits HIV replication in macrophages

We first examined the effect of IFN-λ3 on HIV replication in macrophages. When added to HIV-infected macrophage cultures, IFN-λ3 significantly inhibited HIV RT activity in a dose (Fig. 1A) and time (Fig. 1B) dependant fashion. This inhibitory effect of IFN-λ3 on HIV was observed under three different treatment conditions (Fig. 1C). The highest inhibition of HIV was observed in macrophage cultures pretreated with IFN-λ3 (prior to HIV infection) (Fig. 1C). To maintain IFN-λ3 in HIV-infected cell cultures was necessary, as the withdrawal of IFN-λ3 from infected cultures resulted in a viral rebound (Fig. 1C). HIV inhibition by IFN-λ3 was also confirmed by indirect immunofluorescence staining with antibody against HIV p24 antigen (Fig. 2).

Figure 1
Effect of IFN-λ3 on HIV infection of human macrophages.
Figure 2
Indirect immunofluorescence assay for HIV p24.

IFN-λ3 induces key elements in JAK-STAT pathway

To determine the mechanism of IFN-λ3-mediated anti-HIV activity in macrophages, we examined the effect of IFN-λ3 on the expression of TLRs as well as several key elements in IFN-λ signaling pathway in both uninfected and infected macrophages. We first determined whether IFN-λ3 treatment modulates TLR (TLR3, 7, 9) expression in macrophages. IFN-λ3 treatment of uninfected macrophages could induce the expression of TLR7 and TLR9 (Fig. 3A). More significantly, IFN-λ3 induced TLR3 expression in uninfected macrophages as much as 40 folds (Fig. 3A). We next examined whether IFN-λ3 upregulates the expression of IFN regulatory factors (IRFs). As shown in Fig. 3B, IFN-λ3 induced the expression of several key IRFs, particularly IRF7 in uninfected macrophages (Fig. 3B). Because IFN-λ, through binding to IL-28Rα and IL-10Rβ, activates JAK-STAT pathway [17], and TLR activation induces type I IFN expressions [18], we further examined the impact of IFN-λ3 on type I IFN signaling pathway. As shown in Fig. 3C, the expression of IL-28Rα and STAT-1/2 was significantly induced by IFN-λ3 in uninfected macrophages. In addition, IFN-λ3 treatment of uninfected macrophages enhanced the expression of two key adaptors (MyD88 and TRIF) in type I IFN pathway activation (Fig. 3C). Because HIV infection/replication could have a negative effect on the expression of the antiviral cellular factors, we examined the impact of HIV on IFN-λ3-mediated induction of the key elements in JAK-STAT pathway in infected macrophages. As shown in Fig. 4, although IFN-λ could induce the expression of TLRs as well as other antiviral factors in infected macrophages, the degree of the induction was lower (Fig. 4) than that in uninfected cells (Fig. 3).

Figure 3
Effect of IFN-λ3 on the key elements in JAK-STAT pathway in uninfected macrophages.
Figure 4
Effect of IFN-λ3 on the key elements in JAK-STAT pathway in HIV infected macrophages.

IFN-λ3 is more potent in suppressing HIV than IFN-λ1 and IFN-λ2

IFN-λ1 or IFN-λ2 has been shown to inhibit HIV replication in macrophages [6], we thus compared the anti-HIV ability of IFN-λ3 with IFN-λ1 or IFN-λ2. As shown in Fig. 5A, the inhibitory effect of IFN-λ3 on HIV in macrophages is more potent than that of IFN-λ1 or IFN-λ2. In addition, IFN-λ3 was the most potent inducer of cellular antiviral factors (ISG-56, MxA, OAS-1, A3G/F and tetherin) among the three IFN-λ family members (Fig. 5B).

Figure 5
Effects of IFN-λ1, IFN-λ2 and IFN-λ3 on HIV.

The anti-HIV activity of IFN-λ3 is dependent on JAK-STAT pathway

In order to explore the mechanisms of the anti-HIV activity of IFN-λ3, we examined the role of JAK-STAT pathway in the IFN-λ3 action against HIV. As shown in Fig. 6A, the anti-HIV activity of IFN-λ3 was found to be significantly suppressed by the inhibitor (JAK inhibitor I) of JAK-STAT pathway. In addition, JAK inhibitor I treatment compromised the inducing effects of IFN-λ3 on several key antiviral cellular factors, including ISG-56, MxA, OAS-1, A3G/F and tetherin (Fig. 6B).

Figure 6
Effect of JAK-STAT inhibitor on the IFN-λ3 actions.

Discussion

Compared to IFN-λ1 or IFN-λ2, IFN-λ3 is thought to be more important for anti-HCV therapy, as its genetic variation of three single-nucleotide polymorphisms (SNPs) (rs12979860, rs12980275, and rs8099917) in upstream of the IFN-λ3 (IL-28B) gene is highly associated with treatment outcomes of Peg-IFNα-2a plus ribavirin therapy [11][14]. Although the anti-HIV function of IFN-λ1 or IFN-λ2 has been demonstrated [6], it remains to be determined whether IFN-λ3 has the ability to suppress HIV. In the present study, we have provided the experimental evidence that similar to IFN-λ1 and IFN-λ2, IFN-λ3 treatment resulted in the inhibition of HIV infection of macrophages. When macrophages were pretreated once with IFN-λ3, a nearly complete inhibition of HIV of macrophages was observed (Fig. 1). The presence of IFN-λ3 in the cultures is necessary to maintain HIV suppression, as the withdrawal of IFN-λ3 from the cultures resulted in a rebound of viral replication (Fig. 1C). This inhibitory effect of IFN-λ3 treatment was seen even after HIV infection had been initiated in macrophages (Fig. 1). We also demonstrated that IFN-λ3 appeared to be more potent in inhibiting HIV replication in macrophages than IFN-λ1 or IFN-λ2 (Fig. 5). This enhanced ability to inhibit HIV could be due to its stronger effects on several key cellular antiviral factors in macrophages than IFN-λ1 or IFN-λ2 (Fig. 5B).

IFN-λ functionally resembles type I IFNs in antiviral protection [19]. Despite of the overlapping antiviral functions of IFN-λ with type I IFNs, the more restriction pattern of IFN-λ receptor (IL-28Rα) expression suggests that IFN-λ has a more specialized role in host antiviral defense against viruses in a subset of cells [20], [21]. In addition, the mechanisms by which IFN-λ establishes an antiviral state are not as well characterized as those for IFN-α/β. Our studies showed that IFN-λ3 through multiple mechanisms suppressed HIV infection and replication. We first investigated whether IFN-λ3 activates JAK-STAT signaling pathway, inducing the antiviral state in macrophages. IFN-λ3 treatment of macrophages upregulated the expression of either key factors of JAK-STAT pathway, such as STAT1 and STAT2 (Fig. 3C, ,4C),4C), or the known ISGs in the downstream of JAK-SATA pathway, including ISG-56, MxA, and OAS-1 (Fig. 5B). The role of JAK-STAT pathway in the anti-HIV activity of IFN-λ3 was further confirmed by the observation that to block of JAK-STAT signaling pathway by the JAK inhibitor could compromise the IFN-λ3 action on HIV and significantly decrease the expression of IFN-λ3-induced antiviral factors (Fig. 6). We also demonstrated that APOBEC3G and APOBEC3F, the specific anti-HIV cellular factors, were induced by IFN-λ through JAK-STAT pathway (Figs. 5B and and6B).6B). In addition, tetherin, a transmembrane protein that specifically inhibits HIV infection by preventing its release from infected cells, was also induced by IFN-λ through JAK-STAT pathway (Figs. 5B and and6B).6B). Thus, JAK-STAT pathway plays a crucial role in the anti-HIV activity of IFN-λ3 in macrophages, which is in agreement with the previous findings, showing that IFN-λ3, through the activation of JAK-STAT pathway, exerts its anti-HCV function in human hepatocytes [10].

TLRs are crucial in the innate immune responses to pathogens, because they recognize and respond to PAMPs, which leads to activation of intracellular signaling pathways. Among the eleven identified human TLRs, three TLRs (TLR- 3, 7, and 9) play a key role in virus-mediated innate immunity, as they specifically recognizes viral RNA or DNA and initiate antiviral signaling pathways in macrophages [22], [23]. Our studies demonstrated that IFN-λ3 could significantly induce the expression of TLR3 as well as TLR3-associated adaptors such as MyD88 and TRIF (Figs. 3A, 3C, 4A and 4C). These observations provide an additional mechanism for IFN-λ3-mediated anti-HIV action, as TLR3 signaling has a crucial role in early innate immune response to viral infections, including HIV [24].

Our further investigation showed that IFN-λ3 induced the expression of IRFs (IRF-1, 3, 5, 7 and 9) in macrophages infected with or without HIV (Figs. 3B and and4B).4B). The IRFs are important regulators in the type I and III IFN-mediated antiviral immunity. These regulators not only recognize the elements of DNA promoter to modulate type I and III IFN genes, but also regulate the IFN-stimulated response element (ISRE) in some of ISGs, leading to induction of an antiviral state [25], [26]. Recent studies [27][29] have further demonstrated an essential role of IRF-3, IRF-5, and IRF-7 in the activation of type I and III IFN expression, which is critical for the production of down-stream antiviral factors such as ISG-56, MxA, OAS-1, tetherin (Fig. 6).

Taken together, our data have provided the compelling evidence that IFN-λ3 through the activation of TLR3 and JAK-STAT pathways inhibited HIV infection of macrophage. Although the precise cellular and molecular mechanisms by which IFN-λ3 inhibits HIV replication remain to be determined, the induction of multiple cellular restriction factors against HIV should account for much of IFN-λ3-mediated anti-HIV activity. These anti-HIV mechanisms of the IFN-λ3 action offer an attractive alternative for HIV treatment, as it would be extremely difficult for HIV to develop resistance to the IFN-λ3 actions that suppress virus at various steps of its replication in the context of host cell innate immunity. However, future studies are needed in order to determine the impact of IFN-λ3 on HIV in ex vivo and in vivo systems. These additional studies shall explore the potential for developing IFN-λ3-based therapy for people infected with HIV.

Footnotes

Competing Interests: The authors have declared that no competing interests exist.

Funding: This study was supported by the National Institutes of Health/National Institute on Drug Abuse (No: DA12815, DA22177, and DA27550) and the National Natural Sciences Foundation of China (No: 81001303). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

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