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New connections in the prokaryotic toxin-antitoxin network: relationship with the eukaryotic nonsense-mediated RNA decay system
Vivek Anantharaman, L Aravind
Genome Biol. 2003; 4(12): R81. Published online 2003 November 26.
PMCID:
PMC329420
Abstract Full Text PDF–447K Supplementary Material

Is Cited by the Following 54 Articles in this Archive:

Evolutionary, ecological and biotechnological perspectives on plasmids resident in the human gut mobile metagenome
Lesley A. Ogilvie, Sepinoud Firouzmand, Brian V. Jones
Bioeng Bugs. 2012 January 1; 3(1): 13–31. doi: 10.4161/bbug.3.1.17883
PMCID:
PMC3329251
Abstract Full Text PDF–1016K
Toxin-Antitoxin Systems of Mycobacterium smegmatis Are Essential for Cell Survival
Rebekah Frampton, Raphael B. M. Aggio, Silas G. Villas-Bôas, Vickery L. Arcus, Gregory M. Cook
J Biol Chem. 2012 February 17; 287(8): 5340–5356. Published online 2011 December 23. doi: 10.1074/jbc.M111.286856
PMCID:
PMC3285314
Free in PMC on 2013/02/17
Crystal structure of the DNA-bound VapBC2 antitoxin/toxin pair from Rickettsia felis
María J. Maté, Renaud Vincentelli, Nicolas Foos, Didier Raoult, Christian Cambillau, Miguel Ortiz-Lombardía
Nucleic Acids Res. 2012 April; 40(7): 3245–3258. Published online 2011 December 2. doi: 10.1093/nar/gkr1167
PMCID:
PMC3326315
Abstract Full Text PDF–8.8M Supplementary Material
Bacterial toxin-antitoxin systems: Translation inhibitors everywhere
Julien Guglielmini, Laurence Van Melderen
Mob Genet Elements. 2011 November 1; 1(4): 283–290. doi: 10.4161/mge.18477
PMCID:
PMC3337138
Abstract Full Text PDF–279K
Evolution of the deaminase fold and multiple origins of eukaryotic editing and mutagenic nucleic acid deaminases from bacterial toxin systems
Lakshminarayan M. Iyer, Dapeng Zhang, Igor B. Rogozin, L. Aravind
Nucleic Acids Res. 2011 December; 39(22): 9473–9497. Published online 2011 September 2. doi: 10.1093/nar/gkr691
PMCID:
PMC3239186
Abstract Full Text PDF–18M
Comparative Analysis of Histophilus somni Immunoglobulin-binding Protein A (IbpA) with Other Fic Domain-containing Enzymes Reveals Differences in Substrate and Nucleotide Specificities
Seema Mattoo, Eric Durrant, Mark J. Chen, Junyu Xiao, Cheri S. Lazar, Gerard Manning, Jack E. Dixon, Carolyn A. Worby
J Biol Chem. 2011 September 16; 286(37): 32834–32842. Published online 2011 July 27. doi: 10.1074/jbc.M111.227603
PMCID:
PMC3173180
Abstract Full Text
VapC6, a ribonucleolytic toxin regulates thermophilicity in the crenarchaeote Sulfolobus solfataricus
Yukari Maezato, Amanda Daugherty, Karl Dana, Edith Soo, Charlotte Cooper, Sabrina Tachdjian, Robert M. Kelly, Paul Blum
RNA. 2011 July; 17(7): 1381–1392. doi: 10.1261/rna.2679911
PMCID:
PMC3138573
Abstract Full Text PDF–635K
Diversity of bacterial type II toxin–antitoxin systems: a comprehensive search and functional analysis of novel families
Raphaël Leplae, Damien Geeraerts, Régis Hallez, Julien Guglielmini, Pierre Drèze, Laurence Van Melderen
Nucleic Acids Res. 2011 July; 39(13): 5513–5525. Published online 2011 March 21. doi: 10.1093/nar/gkr131
PMCID:
PMC3141249
Abstract Full Text PDF–4.9M Supplementary Material
A novel immunity system for bacterial nucleic acid degrading toxins and its recruitment in various eukaryotic and DNA viral systems
Dapeng Zhang, Lakshminarayan M. Iyer, L. Aravind
Nucleic Acids Res. 2011 June; 39(11): 4532–4552. Published online 2011 February 8. doi: 10.1093/nar/gkr036
PMCID:
PMC3113570
Abstract Full Text PDF–28M Supplementary Material
Txe, an endoribonuclease of the enterococcal Axe–Txe toxin–antitoxin system, cleaves mRNA and inhibits protein synthesis
Elizabeth M. Halvorsen, Julia J. Williams, Azra J. Bhimani, Emily A. Billings, Paul J. Hergenrother
Microbiology. 2011 February; 157(Pt 2): 387–397. doi: 10.1099/mic.0.045492-0
PMCID:
PMC3090131
Abstract Full Text PDF–374K
Vibrio cholerae ParE2 Poisons DNA Gyrase via a Mechanism Distinct from Other Gyrase Inhibitors
Jie Yuan, Yann Sterckx, Lesley A. Mitchenall, Anthony Maxwell, Remy Loris, Matthew K. Waldor
J Biol Chem. 2010 December 17; 285(51): 40397–40408. Published online 2010 October 15. doi: 10.1074/jbc.M110.138776
PMCID:
PMC3001019
Abstract Full Text Supplementary Material
Evidence of Transfer by Conjugation of Type IV Secretion System Genes between Bartonella Species and Rhizobium radiobacter in Amoeba
Watcharee Saisongkorh, Catherine Robert, Bernard La Scola, Didier Raoult, Jean-Marc Rolain
PLoS One. 2010; 5(9): e12666. Published online 2010 September 13. doi: 10.1371/journal.pone.0012666
PMCID:
PMC2938332
Abstract Full Text PDF–3.6M Supplementary Material
Characterization of the Interaction and Cross-Regulation of Three Mycobacterium tuberculosis RelBE Modules
Min Yang, Chunhui Gao, Yi Wang, Hua Zhang, Zheng-Guo He
PLoS One. 2010; 5(5): e10672. Published online 2010 May 17. doi: 10.1371/journal.pone.0010672
PMCID:
PMC2871789
Abstract Full Text PDF–1.4M Supplementary Material
The Yersinia pestis Chromosome Encodes Active Addiction Toxins
Céline Goulard, Sophie Langrand, Elisabeth Carniel, Sylvie Chauvaux
J Bacteriol. 2010 July; 192(14): 3669–3677. Published online 2010 May 14. doi: 10.1128/JB.00336-10
PMCID:
PMC2897361
Abstract Full Text PDF–833K Supplementary Material
Interaction specificity, toxicity, and regulation of a paralogous set of ParE/RelE-family toxin-antitoxin systems
Aretha Fiebig, Cyd Marie Castro Rojas, Dan Siegal-Gaskins, Sean Crosson
Mol Microbiol. Author manuscript; available in PMC 2011 July 1.
Published in final edited form as: Mol Microbiol. 2010 July 1; 77(1): 236–251. Published online 2010 May 12. doi: 10.1111/j.1365-2958.2010.07207.x
PMCID:
PMC2907451
Abstract Full Text PDF–1.5M Supplementary Material
Function inferences from a molecular structural model of bacterial ParE toxin
Luiz Carlos Bertucci Barbosa, Saulo Santesso Garrido, Anderson Garcia, Davi Barbosa Delfino, Reinaldo Marchetto
Bioinformation. 2010; 4(10): 438–440. Published online 2010 April 30.
PMCID:
PMC2951705
Abstract Full Text PDF–281K
A conserved mode of protein recognition and binding in a ParD-ParE toxin-antitoxin complex
Kevin M. Dalton, Sean Crosson
Biochemistry. Author manuscript; available in PMC 2011 March 16.
Published in final edited form as: Biochemistry. 2010 March 16; 49(10): 2205–2215. doi: 10.1021/bi902133s
PMCID:
PMC2846751
Abstract Full Text PDF–4.3M
Origin of the cell nucleus, mitosis and sex: roles of intracellular coevolution
Thomas Cavalier-Smith
Biol Direct. 2010; 5: 7. Published online 2010 February 4. doi: 10.1186/1745-6150-5-7
PMCID:
PMC2837639
Abstract Full Text PDF–2.3M
Signals of Growth Regulation in Bacteria
Christopher S. Hayes, David A. Low
Curr Opin Microbiol. Author manuscript; available in PMC 2010 December 1.
Published in final edited form as: Curr Opin Microbiol. 2009 December; 12(6): 667–673. Published online 2009 October 23. doi: 10.1016/j.mib.2009.09.006
PMCID:
PMC2789310
Abstract Full Text PDF–1.0M
Fido, a Novel AMPylation Domain Common to Fic, Doc, and AvrB
Lisa N. Kinch, Melanie L. Yarbrough, Kim Orth, Nick V. Grishin
PLoS ONE. 2009; 4(6): e5818. Published online 2009 June 5. doi: 10.1371/journal.pone.0005818
PMCID:
PMC2686095
Abstract Full Text PDF–2.1M Supplementary Material
Comprehensive comparative-genomic analysis of Type 2 toxin-antitoxin systems and related mobile stress response systems in prokaryotes
Kira S Makarova, Yuri I Wolf, Eugene V Koonin
Biol Direct. 2009; 4: 19. Published online 2009 June 3. doi: 10.1186/1745-6150-4-19
PMCID:
PMC2701414
Abstract Full Text PDF–2.0M Supplementary Material
Inhibitory Mechanism of Escherichia coli RelE-RelB Toxin-Antitoxin Module Involves a Helix Displacement Near an mRNA Interferase Active Site
Guang-Yao Li, Yonglong Zhang, Masayori Inouye, Mitsuhiko Ikura
J Biol Chem. 2009 May 22; 284(21): 14628–14636. doi: 10.1074/jbc.M809656200
PMCID:
PMC2682910
Abstract Full Text Supplementary Material
In Vivo Interactions between Toxin-Antitoxin Proteins Epsilon and Zeta of Streptococcal Plasmid pSM19035 in Saccharomyces cerevisiae
Urszula Zielenkiewicz, Magdalena Kowalewska, Celina Kaczor, Piotr Cegłowski
J Bacteriol. 2009 June; 191(11): 3677–3684. Published online 2009 April 3. doi: 10.1128/JB.01763-08
PMCID:
PMC2681916
Abstract Full Text PDF–472K Supplementary Material
Crystal structure of the Fic (Filamentation Induced by cAMP) family protein SO4266 (gi|24375750) from Shewanella oneidensis MR-1 at 1.6 Å resolution
Debanu Das, S. Sri Krishna, Daniel McMullan, Mitchell D. Miller, Qingping Xu, Polat Abdubek, Claire Acosta, Tamara Astakhova, Herbert L. Axelrod, Prasad Burra, Dennis Carlton, Hsiu-Ju Chiu, Thomas Clayton, Marc C. Deller, Lian Duan, Ylva Elias, Marc-Andre Elsliger, Dustin Ernst, Julie Feuerhelm, Anna Grzechnik, Slawomir K. Grzechnik, Joanna Hale, Gye Won Han, Lukasz Jaroszewski, Kevin K. Jin, Heath E. Klock, Mark W. Knuth, Piotr Kozbial, Abhinav Kumar, David Marciano, Andrew T. Morse, Kevin D. Murphy, Edward Nigoghossian, Linda Okach, Silvya Oommachen, Jessica Paulsen, Ron Reyes, Christopher L. Rife, Natasha Sefcovic, Henry Tien, Christine Trame, Christina V. Trout, Henry van den Bedem, Dana Weekes, Aprilfawn White, Keith O. Hodgson, John Wooley, Ashley M. Deacon, Adam Godzik, Scott A. Lesley, Ian A. Wilson
Proteins. Author manuscript; available in PMC 2010 April 1.
Published in final edited form as: Proteins. 2009 April; 75(1): 264–271. doi: 10.1002/prot.22338
PMCID:
PMC2674511
Full Text PDF–1.4M
Bacterial Toxin–Antitoxin Systems: More Than Selfish Entities?
Laurence Van Melderen, Manuel Saavedra De Bast
PLoS Genet. 2009 March; 5(3): e1000437. Published online 2009 March 27. doi: 10.1371/journal.pgen.1000437
PMCID:
PMC2654758
Abstract Full Text PDF–251K
Role of vapBC toxin–antitoxin loci in the thermal stress response of Sulfolobus solfataricus
Charlotte R. Cooper, Amanda J. Daugherty, Sabrina Tachdjian, Paul H. Blum, Robert M. Kelly
Biochem Soc Trans. Author manuscript; available in PMC 2010 August 10.
Published in final edited form as: Biochem Soc Trans. 2009 February; 37(Pt 1): 123–126. doi: 10.1042/BST0370123
PMCID:
PMC2919284
Abstract Full Text PDF–461K
HicA of Escherichia coli Defines a Novel Family of Translation-Independent mRNA Interferases in Bacteria and Archaea
Mikkel G. Jørgensen, Deo P. Pandey, Milena Jaskolska, Kenn Gerdes
J Bacteriol. 2009 February; 191(4): 1191–1199. Published online 2008 December 5. doi: 10.1128/JB.01013-08
PMCID:
PMC2631989
Abstract Full Text PDF–1.1M Supplementary Material
Doc of Prophage P1 Is Inhibited by Its Antitoxin Partner Phd through Fold Complementation
Abel Garcia-Pino, Mikkel Christensen-Dalsgaard, Lode Wyns, Michael Yarmolinsky, Roy David Magnuson, Kenn Gerdes, Remy Loris
J Biol Chem. 2008 November 7; 283(45): 30821–30827. doi: 10.1074/jbc.M805654200
PMCID:
PMC2576525
Abstract Full Text Supplementary Material
Translation affects YoeB and MazF messenger RNA interferase activities by different mechanisms
Mikkel Christensen-Dalsgaard, Kenn Gerdes
Nucleic Acids Res. 2008 November; 36(20): 6472–6481. Published online 2008 November. doi: 10.1093/nar/gkn667
PMCID:
PMC2582610
Abstract Full Text PDF–10M
Crystallization of Doc and the Phd–Doc toxin–antitoxin complex
Abel Garcia-Pino, Minh-Hoa Dao-Thi, Ehud Gazit, Roy David Magnuson, Lode Wyns, Remy Loris
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 November 1; 64(Pt 11): 1034–1038. Published online 2008 October 28. doi: 10.1107/S1744309108031722
PMCID:
PMC2581698
Abstract Full Text PDF–480K
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