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Differential binding and co-binding pattern of FOXA1 and FOXA3 and their relation to H3K4me3 in HepG2 cells revealed by ChIP-seq
Mehdi Motallebipour, Adam Ameur, Madhu Sudhan Reddy Bysani, Kalicharan Patra, Ola Wallerman, Jonathan Mangion, Melissa A Barker, Kevin J McKernan, Jan Komorowski, Claes Wadelius
Genome Biol. 2009; 10(11): R129. Published online 2009 November 17. doi: 10.1186/gb-2009-10-11-r129
PMCID:
PMC3091322
Abstract Full Text PDF–2.3M Supplementary Material
 Is Cited by the Following 6 Articles in this Archive:
The Forkhead Transcription Factor FOXK2 Promotes AP-1-Mediated Transcriptional Regulation
Zongling Ji, Ian J. Donaldson, Jingru Liu, Andrew Hayes, Leo A. H. Zeef, Andrew D. Sharrocks
Mol Cell Biol. 2012 January; 32(2): 385–398. doi: 10.1128/MCB.05504-11
PMCID:
PMC3255788
Abstract Full Text PDF–1.3M Supplementary Material
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity
Lingyun Song, Zhancheng Zhang, Linda L. Grasfeder, Alan P. Boyle, Paul G. Giresi, Bum-Kyu Lee, Nathan C. Sheffield, Stefan Gräf, Mikael Huss, Damian Keefe, Zheng Liu, Darin London, Ryan M. McDaniell, Yoichiro Shibata, Kimberly A. Showers, Jeremy M. Simon, Teresa Vales, Tianyuan Wang, Deborah Winter, Zhuzhu Zhang, Neil D. Clarke, Ewan Birney, Vishwanath R. Iyer, Gregory E. Crawford, Jason D. Lieb, Terrence S. Furey
Genome Res. 2011 October; 21(10): 1757–1767. doi: 10.1101/gr.121541.111
PMCID:
PMC3202292
Abstract Full Text PDF–1.6M
Enhancers regulate progression of development in mammalian cells
Anna-Lena Kranz, Roland Eils, Rainer König
Nucleic Acids Res. 2011 November; 39(20): 8689–8702. Published online 2011 July 23. doi: 10.1093/nar/gkr602
PMCID:
PMC3203619
Abstract Full Text PDF–4.2M Supplementary Material
Epigenetic switch involved in activation of pioneer factor FOXA1-dependent enhancers
Aurélien A. Sérandour, Stéphane Avner, Frédéric Percevault, Florence Demay, Maud Bizot, Céline Lucchetti-Miganeh, Frédérique Barloy-Hubler, Myles Brown, Mathieu Lupien, Raphaël Métivier, Gilles Salbert, Jérôme Eeckhoute
Genome Res. 2011 April; 21(4): 555–565. doi: 10.1101/gr.111534.110
PMCID:
PMC3065703
Abstract Full Text PDF–1.1M
Next generation sequencing based approaches to epigenomics
Martin Hirst, Marco A. Marra
Brief Funct Genomics. 2010 December; 9(5-6): 455–465. Published online 2011 January 22. doi: 10.1093/bfgp/elq035
PMCID:
PMC3080743
Abstract Full Text PDF–205K
Core promoter structure and genomic context reflect histone 3 lysine 9 acetylation patterns
Anton Kratz, Erik Arner, Rintaro Saito, Atsutaka Kubosaki, Jun Kawai, Harukazu Suzuki, Piero Carninci, Takahiro Arakawa, Masaru Tomita, Yoshihide Hayashizaki, Carsten O Daub
BMC Genomics. 2010; 11: 257. Published online 2010 April 21. doi: 10.1186/1471-2164-11-257
PMCID:
PMC2867832
Abstract Full Text PDF–1.6M Supplementary Material
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