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A scalable, fully automated process for construction of sequence-ready barcoded libraries for 454
Niall J Lennon, Robert E Lintner, Scott Anderson, Pablo Alvarez, Andrew Barry, William Brockman, Riza Daza, Rachel L Erlich, Georgia Giannoukos, Lisa Green, Andrew Hollinger, Cindi A Hoover, David B Jaffe, Frank Juhn, Danielle McCarthy, Danielle Perrin, Karen Ponchner, Taryn L Powers, Kamran Rizzolo, Dana Robbins, Elizabeth Ryan, Carsten Russ, Todd Sparrow, John Stalker, Scott Steelman, Michael Weiand, Andrew Zimmer, Matthew R Henn, Chad Nusbaum, Robert Nicol
Genome Biol. 2010; 11(2): R15. Published online 2010 February 5. doi: 10.1186/gb-2010-11-2-r15
PMCID:
PMC2872875
Abstract Full Text PDF–639K Supplementary Material

Is Cited by the Following 16 Articles in this Archive:

Bacterial Communities of the Coronal Sulcus and Distal Urethra of Adolescent Males
David E. Nelson, Qunfeng Dong, Barbara Van Der Pol, Evelyn Toh, Baochang Fan, Barry P. Katz, Deming Mi, Ruichen Rong, George M. Weinstock, Erica Sodergren, J. Dennis Fortenberry
PLoS One. 2012; 7(5): e36298. Published online 2012 May 11. doi: 10.1371/journal.pone.0036298
PMCID:
PMC3350528
Abstract Full Text PDF–601K Supplementary Material
Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture
Nadin Rohland, David Reich
Genome Res. 2012 May; 22(5): 939–946. doi: 10.1101/gr.128124.111
PMCID:
PMC3337438
Free in PMC on 2012/11/01
Automated Workflow for Preparation of cDNA for Cap Analysis of Gene Expression on a Single Molecule Sequencer
Masayoshi Itoh, Miki Kojima, Sayaka Nagao-Sato, Eri Saijo, Timo Lassmann, Mutsumi Kanamori-Katayama, Ai Kaiho, Marina Lizio, Hideya Kawaji, Piero Carninci, Alistair R. R. Forrest, Yoshihide Hayashizaki
PLoS One. 2012; 7(1): e30809. Published online 2012 January 30. doi: 10.1371/journal.pone.0030809
PMCID:
PMC3268765
Abstract Full Text PDF–452K Supplementary Material
NGS technologies for analyzing germplasm diversity in genebanks
Benjamin Kilian, Andreas Graner
Brief Funct Genomics. 2012 January; 11(1): 38–50. Published online 2012 January 17. doi: 10.1093/bfgp/elr046
PMCID:
PMC3281264
Abstract Full Text PDF–448K
Targeted Amplicon Sequencing (TAS): A Scalable Next-Gen Approach to Multilocus, Multitaxa Phylogenetics
Seth M. Bybee, Heather Bracken-Grissom, Benjamin D. Haynes, Russell A. Hermansen, Robert L. Byers, Mark J. Clement, Joshua A. Udall, Edward R. Wilcox, Keith A. Crandall
Genome Biol Evol. 2011; 3: 1312–1323. Published online 2011 October 13. doi: 10.1093/gbe/evr106
PMCID:
PMC3236605
Abstract Full Text PDF–857K
Rapid flow-sorting to simultaneously resolve multiplex massively parallel sequencing products
Julia Sandberg, Beata Werne, Mark Dessing, Joakim Lundeberg
Sci Rep. 2011; 1: 108. Published online 2011 October 6. doi: 10.1038/srep00108
PMCID:
PMC3216591
Abstract Full Text PDF–1.0M
Clinical implementation of comprehensive strategies to characterize cancer genomes: opportunities and challenges
Laura E. MacConaill, Paul Van Hummelen, Matthew Meyerson, William C. Hahn
Cancer Discov. Author manuscript; available in PMC 2012 September 1.
Published in final edited form as: Cancer Discov. 2011 September 1; 1(4): 297. doi: 10.1158/2159-8290.CD-11-0110
PMCID:
PMC3175123
Free in PMC on 2012/09/01
Scalable Transcriptome Preparation for Massive Parallel Sequencing
Henrik Stranneheim, Beata Werne, Ellen Sherwood, Joakim Lundeberg
PLoS One. 2011; 6(7): e21910. Published online 2011 July 7. doi: 10.1371/journal.pone.0021910
PMCID:
PMC3131396
Abstract Full Text PDF–622K Supplementary Material
Large Scale Library Generation for High Throughput Sequencing
Erik Borgström, Sverker Lundin, Joakim Lundeberg
PLoS One. 2011; 6(4): e19119. Published online 2011 April 27. doi: 10.1371/journal.pone.0019119
PMCID:
PMC3083417
Abstract Full Text PDF–523K Supplementary Material
A next-generation sequencing method for overcoming the multiple gene copy problem in polyploid phylogenetics, applied to Poa grasses
Philippa C Griffin, Charles Robin, Ary A Hoffmann
BMC Biol. 2011; 9: 19. Published online 2011 March 23. doi: 10.1186/1741-7007-9-19
PMCID:
PMC3078099
Abstract Full Text PDF–557K Supplementary Material
Next-generation sequencing for HLA typing of class I loci
Rachel L Erlich, Xiaoming Jia, Scott Anderson, Eric Banks, Xiaojiang Gao, Mary Carrington, Namrata Gupta, Mark A DePristo, Matthew R Henn, Niall J Lennon, Paul IW de Bakker
BMC Genomics. 2011; 12: 42. Published online 2011 January 18. doi: 10.1186/1471-2164-12-42
PMCID:
PMC3033818
Abstract Full Text PDF–2.4M Supplementary Material
A scalable, fully automated process for construction of sequence-ready human exome targeted capture libraries
Sheila Fisher, Andrew Barry, Justin Abreu, Brian Minie, Jillian Nolan, Toni M Delorey, Geneva Young, Timothy J Fennell, Alexander Allen, Lauren Ambrogio, Aaron M Berlin, Brendan Blumenstiel, Kristian Cibulskis, Dennis Friedrich, Ryan Johnson, Frank Juhn, Brian Reilly, Ramy Shammas, John Stalker, Sean M Sykes, Jon Thompson, John Walsh, Andrew Zimmer, Zac Zwirko, Stacey Gabriel, Robert Nicol, Chad Nusbaum
Genome Biol. 2011; 12(1): R1. Published online 2011 January 4. doi: 10.1186/gb-2011-12-1-r1
PMCID:
PMC3091298
Abstract Full Text PDF–1.0M Supplementary Material
Rapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transposition
Andrew Adey, Hilary G Morrison, Asan, Xu Xun, Jacob O Kitzman, Emily H Turner, Bethany Stackhouse, Alexandra P MacKenzie, Nicholas C Caruccio, Xiuqing Zhang, Jay Shendure
Genome Biol. 2010; 11(12): R119. Published online 2010 December 8. doi: 10.1186/gb-2010-11-12-r119
PMCID:
PMC3046479
Abstract Full Text PDF–3.6M Supplementary Material
Applications of next generation sequencing in molecular ecology of non-model organisms
R Ekblom, J Galindo
Heredity. 2011 July; 107(1): 1–15. Published online 2010 December 8. doi: 10.1038/hdy.2010.152
PMCID:
PMC3186121
Free in PMC on 2012/07/01
Ultra High Throughput Sequencing in Human DNA Variation Detection: A Comparative Study on the NDUFA3-PRPF31 Region
Paola Benaglio, Carlo Rivolta
PLoS One. 2010; 5(9): e13071. Published online 2010 September 29. doi: 10.1371/journal.pone.0013071
PMCID:
PMC2947511
Abstract Full Text PDF–917K Supplementary Material
Unlocking Short Read Sequencing for Metagenomics
Sébastien Rodrigue, Arne C. Materna, Sonia C. Timberlake, Matthew C. Blackburn, Rex R. Malmstrom, Eric J. Alm, Sallie W. Chisholm
PLoS One. 2010; 5(7): e11840. Published online 2010 July 28. doi: 10.1371/journal.pone.0011840
PMCID:
PMC2911387
Abstract Full Text PDF–1.1M Supplementary Material
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