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Non-imprinted allele-specific DNA methylation on human autosomes
Yingying Zhang, Christian Rohde, Richard Reinhardt, Claudia Voelcker-Rehage, Albert Jeltsch
Genome Biol. 2009; 10(12): R138. Published online 2009 December 3. doi: 10.1186/gb-2009-10-12-r138
PMCID:
PMC2812945
Abstract Full Text PDF–1020K Supplementary Material
 Is Cited by the Following 14 Articles in this Archive:
Methylation of L1Hs promoters is lower on the inactive X, has a tendency of being higher on autosomes in smaller genomes and shows inter-individual variability at some loci
Heike Singer, Maja Walier, Nicole Nüsgen, Christian Meesters, Felix Schreiner, Joachim Woelfle, Rolf Fimmers, Thomas Wienker, Vera M. Kalscheuer, Tim Becker, Rainer Schwaab, Johannes Oldenburg, Osman El-Maarri
Hum Mol Genet. 2012 January 1; 21(1): 219–235. Published online 2011 October 4. doi: 10.1093/hmg/ddr456
PMCID:
PMC3235015
Abstract Full Text PDF–1.1M Supplementary Material
Analysis of DNA Methylation in a Three-Generation Family Reveals Widespread Genetic Influence on Epigenetic Regulation
Jason Gertz, Katherine E. Varley, Timothy E. Reddy, Kevin M. Bowling, Florencia Pauli, Stephanie L. Parker, Katerina S. Kucera, Huntington F. Willard, Richard M. Myers
PLoS Genet. 2011 August; 7(8): e1002228. Published online 2011 August 11. doi: 10.1371/journal.pgen.1002228
PMCID:
PMC3154961
Abstract Full Text PDF–807K Supplementary Material
A comparative analysis of DNA methylation across human embryonic stem cell lines
Pao-Yang Chen, Suhua Feng, Jong Wha Joanne Joo, Steve E Jacobsen, Matteo Pellegrini
Genome Biol. 2011; 12(7): R62. Published online 2011 July 6. doi: 10.1186/gb-2011-12-7-r62
PMCID:
PMC3218824
Abstract Full Text PDF–737K Supplementary Material
B Vitamins, Methionine and Alcohol Intake and Risk of Colon Cancer in Relation to BRAF Mutation and CpG Island Methylator Phenotype (CIMP)
Eva S. Schernhammer, Edward Giovannucci, Yoshifumi Baba, Charles S. Fuchs, Shuji Ogino
PLoS One. 2011; 6(6): e21102. Published online 2011 June 27. doi: 10.1371/journal.pone.0021102
PMCID:
PMC3124479
Abstract Full Text PDF–120K
Allele-Specific, Age-Dependent and BMI-Associated DNA Methylation of Human MCHR1
Stefanie Stepanow, Kathrin Reichwald, Klaus Huse, Ulrike Gausmann, Almut Nebel, Philip Rosenstiel, Martin Wabitsch, Pamela Fischer-Posovszky, Matthias Platzer
PLoS One. 2011; 6(5): e17711. Published online 2011 May 26. doi: 10.1371/journal.pone.0017711
PMCID:
PMC3102661
Abstract Full Text PDF–285K Supplementary Material
Genome-wide quantitative assessment of variation in DNA methylation patterns
Hehuang Xie, Min Wang, Alexandre de Andrade, Maria de F. Bonaldo, Vasil Galat, Kelly Arndt, Veena Rajaram, Stewart Goldman, Tadanori Tomita, Marcelo B. Soares
Nucleic Acids Res. 2011 May; 39(10): 4099–4108. Published online 2011 January 27. doi: 10.1093/nar/gkr017
PMCID:
PMC3105398
Abstract Full Text PDF–1.3M Supplementary Material
Integrated Genetic and Epigenetic Analysis Identifies Haplotype-Specific Methylation in the FTO Type 2 Diabetes and Obesity Susceptibility Locus
Christopher G. Bell, Sarah Finer, Cecilia M. Lindgren, Gareth A. Wilson, Vardhman K. Rakyan, Andrew E. Teschendorff, Pelin Akan, Elia Stupka, Thomas A. Down, Inga Prokopenko, Ian M. Morison, Jonathan Mill, Ruth Pidsley, International Type 2 Diabetes 1q Consortium, Panos Deloukas, Timothy M. Frayling, Andrew T. Hattersley, Mark I. McCarthy, Stephan Beck, Graham A. Hitman
PLoS One. 2010; 5(11): e14040. Published online 2010 November 18. doi: 10.1371/journal.pone.0014040
PMCID:
PMC2987816
Abstract Full Text PDF–361K Supplementary Material
Allele-specific DNA methylation: beyond imprinting
Benjamin Tycko
Hum Mol Genet. 2010 October 15; 19(R2): R210–R220. Published online 2010 September 20. doi: 10.1093/hmg/ddq376
PMCID:
PMC2953749
Abstract Full Text PDF–241K
Identification and resolution of artifacts in the interpretation of imprinted gene expression
Charlotte Proudhon, Déborah Bourc’his
Brief Funct Genomics. 2010 December; 9(5-6): 374–384. Published online 2010 September 8. doi: 10.1093/bfgp/elq020
PMCID:
PMC3080772
Abstract Full Text PDF–500K
Allele-specific methylation is prevalent and is contributed by CpG-SNPs in the human genome
Robert Shoemaker, Jie Deng, Wei Wang, Kun Zhang
Genome Res. 2010 July; 20(7): 883–889. doi: 10.1101/gr.104695.109
PMCID:
PMC2892089
Abstract Full Text PDF–817K
BISMA - Fast and accurate bisulfite sequencing data analysis of individual clones from unique and repetitive sequences
Christian Rohde, Yingying Zhang, Richard Reinhardt, Albert Jeltsch
BMC Bioinformatics. 2010; 11: 230. Published online 2010 May 6. doi: 10.1186/1471-2105-11-230
PMCID:
PMC2877691
Abstract Full Text PDF–2.4M Supplementary Material
Coordinated Chromatin Control: Structural and Functional Linkage of DNA and Histone Methylation
Xiaodong Cheng, Robert M. Blumenthal
Biochemistry. Author manuscript; available in PMC 2010 April 21.
Published in final edited form as: Biochemistry. 2010 April 13; 49(14): 2999–3008. doi: 10.1021/bi100213t
PMCID:
PMC2857722
Abstract Full Text PDF–984K
Allelic Skewing of DNA Methylation Is Widespread across the Genome
Leonard C. Schalkwyk, Emma L. Meaburn, Rebecca Smith, Emma L. Dempster, Aaron R. Jeffries, Matthew N. Davies, Robert Plomin, Jonathan Mill
Am J Hum Genet. 2010 February 12; 86(2): 196–212. doi: 10.1016/j.ajhg.2010.01.014
PMCID:
PMC2820163
Abstract Full Text PDF–1011K Supplementary Material
Mapping Allele-Specific DNA Methylation: A New Tool for Maximizing Information from GWAS
Benjamin Tycko
Am J Hum Genet. 2010 February 12; 86(2): 109–112. doi: 10.1016/j.ajhg.2010.01.021
PMCID:
PMC2820186
Abstract Full Text PDF–252K
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