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Infect Immun. Jan 2010; 78(1): 184–192.
Published online Oct 26, 2009. doi:  10.1128/IAI.00958-09
PMCID: PMC2798226

The Stability of Cytadherence Proteins in Mycoplasma pneumoniae Requires Activity of the Protein Kinase PrkC[down-pointing small open triangle]

Abstract

Mycoplasma pneumoniae belongs to the mollicutes, a group of bacteria that have strongly reduced genomes but that are nevertheless capable of independent life. With only three transcription factors, the regulatory features of these bacteria are very limited. Thus, posttranslational regulation might be important for M. pneumoniae. In addition to the highly specific HPr kinase, the M. pneumoniae prkC gene encodes the serine/threonine protein kinase C. In order to study the function(s) of this kinase, we isolated an M. pneumoniae mutant affected in PrkC. This mutation resulted in nonadherent growth and loss of cytotoxicity. Examination of the phosphorylation profile of the prkC mutant suggested that phosphorylation of cytadherence proteins was affected by the loss of this kinase. In contrast, inactivation of the prpC gene affecting the protein phosphatase that antagonizes PrkC-dependent phosphorylation resulted in more intensive phosphorylation of the cytadherence proteins HMW1 and HMW3 of the major adhesin P1 and of the surface protein MPN474. Moreover, loss of PrkC affects not only the phosphorylation state of the cytadherence proteins but also their intracellular accumulation. However, the expression of the corresponding genes was not affected by PrkC, suggesting that PrkC-dependent phosphorylation results in stabilization of the cytadherence proteins. The HMW proteins and P1 are part of the so-called terminal organelle of M. pneumoniae that is involved in gliding motility, cell division, and adhesion to host epithelial tissues. Our observations suggest that the posttranslational modification of cytadherence proteins by PrkC is essential for the development and function of the M. pneumoniae terminal organelle.

Mycoplasma pneumoniae belongs to the mollicutes, i.e., cell wall-less bacteria. These organisms are among the smallest self-replicating living beings capable of a host-independent existence. M. pneumoniae is a pathogenic bacterium that causes atypical pneumonia and extrapulmonary infections, such as autoimmune disorders, asthma, and arthritis (4, 32, 34).

M. pneumoniae and its close relative Mycoplasma genitalium have recently attracted much attention, not only with respect to the elucidation of pathogenicity mechanisms but also because the small genomes of these bacteria define the lower limit of naturally existing independent life. The analysis of the minimal gene complement of M. pneumoniae and M. genitalium is one of the sources of synthetic biology, a new discipline of biology (12, 13).

However, life is not static and not determined only by a defined set of genes. A very important feature is the control of biological activities in response to changing environmental conditions. Only this control enables organisms to adapt to different habitats and to survive suboptimal conditions. In M. pneumoniae, the regulatory potential seems to be rather limited. In bacteria, regulation of gene expression is achieved mainly at the level of transcription, by alternative sigma factors of the RNA polymerase, by transcription repressors and activators, or by RNA switches. The annotation of the M. pneumoniae genome revealed only one sigma factor and three putative transcriptional repressors. No two-component regulatory system is present (8). This set of transcription factors corresponds to only 0.5% of the protein-coding genes of M. pneumoniae. In contrast, versatile environmental bacteria, such as Streptomyces coelicolor and Pseudomonas aeruginosa, reserve as much as 10% of their coding capacity for transcription regulation (15).

A second way to control biochemical activities is the posttranslational modification of proteins, and protein phosphorylation is the most common protein modification. For a long time, it has been thought that bacteria prefer to phosphorylate proteins on histidine and aspartate residues, whereas eukaryotes phosphorylate serine, threonine, and tyrosine residues. In the past few years, protein phosphorylation on these amino acids was found to be common in bacteria as well (20).

In M. pneumoniae, protein phosphorylation has been studied with the phosphotransferase system. This system uses the phosphate group of phosphoenolpyruvate to phosphorylate consecutively its components, enzyme I, HPr, the glucose permease, and the incoming glucose (17). The HPr protein of the PTS is not only subject to enzyme I-dependent phosphorylation on His-15, but it is also phosphorylated on Ser-46 by the HPr kinase at the expense of ATP (31). The molecular role of HPr phosphorylation on Ser-46 has not yet been identified with M. pneumoniae; in other bacteria this phosphorylation is crucial for carbon catabolite repression (14). Dephosphorylation of HPr(Ser-P) in M. pneumoniae requires the protein phosphatase PrpC, the product of the MPN247 gene (18). This gene is clustered with another gene that potentially encodes a protein kinase (PrkC). This gene cluster is conserved in all firmicutes, i.e., in gram-positive bacteria with a low GC content of their genomic DNA (this group includes the mollicutes). In other firmicutes, PrkC has been shown to be a protein kinase involved in many functions, such as phosphorylation of glycolytic enzymes, virulence, and germination (11, 25, 26, 30). However, the potential protein kinase PrkC of M. pneumoniae has so far not been the subject of any studies.

To date, phosphorylation of HPr by the HPr kinase is the best-studied protein phosphorylation event of M. pneumoniae (3, 16, 18, 27, 31). However, in addition to HPr, several other proteins are phosphorylated in these bacteria. Among these proteins are HMW1 and HMW2, large cytadherence proteins that were shown to be phosphorylated on serine and threonine residues (9, 24). Recently, a proteomic approach was used to identify phosphorylated proteins in M. genitalium and M. pneumoniae (33). This study identified 18 phosphoproteins in M. pneumoniae, among them the surface protein MPN474, the cytadherence protein HMW3, and several metabolic enzymes. Unfortunately, none of the previously identified phosphoproteins was found by the phosphoproteome approach. Until now, it has not been known which kinases are responsible for these phosphorylation events. Moreover, the function of these phosphorylations has not been addressed.

In this work, we have studied the function of PrkC in M. pneumoniae by genetic and proteomic methods. The analysis of a prkC mutant revealed that this kinase is required for adherent growth of the cells on solid surfaces and for cytotoxicity toward eukaryotic cells. Moreover, we provide evidence that PrkC-dependent protein phosphorylation is crucial for the stability of a group of high-molecular-weight cytadherence proteins.

MATERIALS AND METHODS

Bacterial strains, oligonucleotides, and growth conditions.

The M. pneumoniae strains used in this study were M. pneumoniae M129 (ATCC 29342) in the 32nd broth passage and its isogenic mutant derivatives GPM11 (prkC::mini-Tn, Gmr), GPM51 (hprK::mini-Tn, Gmr) (18), GPM68 (prpC::mini-Tn, Gmr) (18), and GPM70 (MPN247::mini-Tn, Gmr) (19). The oligonucleotides used in this study are listed in Table S1 in the supplemental material. M. pneumoniae was grown at 37°C in 150-cm2 tissue culture flasks containing 100 ml of modified Hayflick medium with glucose (1% [wt/vol]) as the carbon source as described previously (17). Strains harboring transposon insertions were cultivated in the presence of 80 μg/ml gentamicin.

Preparation of whole-cell extracts.

A 100-ml culture was washed twice with cold phosphate-buffered saline (PBS) (137 mM NaCl, 2.7 mM KCl, 10 mM sodium hydrogen phosphate, 2 mM potassium dihydrogenphosphate, pH 7.4). The cells were harvested with 1.5 ml PBS by scraping them off the surface of the flask. The cells were then centrifuged for 4 min at 15,000 × g at 4°C. The pellet was resuspended in 150 μl of PBS. The protein concentration was determined and adjusted to 1 μg/μl in PBS containing sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) loading dye. Cells of the M. pneumoniae prkC mutant GPM11 were harvested by centrifugation of the culture. The pellets were washed twice with 1.5 ml PBS, and the cells were resuspended as described above.

Visualization of protein phosphorylation.

In order to detect phosphorylated proteins, cell extracts were separated on 6% SDS polyacrylamide gels. The gels were subsequently stained with Pro-Q Diamond (Invitrogen) and Flamingo fluorescent dye (Bio-Rad) to visualize the phosphoproteins and all proteins, respectively (10). ProQ staining was detected using a Molecular Imager FX (Bio-Rad). Flamingo signals were detected using a Typhoon 9400 image scanner. Relative quantification of the phosphosignal intensities was performed using Image J software version 1.42 (1).

Protein identification by MS.

Gel pieces were washed twice with 200 μl 20 mM NH4HCO3/30% (vol/vol) acetonitrile for 30 min at 37°C and dried in a vacuum centrifuge (Concentrator 5301; Eppendorf). Trypsin solution (10 ng/μl trypsin in 20 mM ammonium bicarbonate) was added until gel pieces stopped swelling, and digestion was allowed to proceed for 16 to 18 h at 37°C. Peptides were extracted from gel pieces by incubation in an ultrasonic bath for 15 min in 20 μl high-performance liquid chromatography-grade water and transferred into micro vials for mass spectrometric analysis. Peptides were separated by liquid chromatography and measured online by electrospray ionization mass spectrometry (MS) using a nanoAcquity ultra-performance liquid chromatography system (Waters, Milford, MA) coupled to an LTQ Orbitrap mass spectrometer (Thermo Fisher Scientific, Waltham, MA). Peptides were desalted onto a trap column (Symmetry C18; Waters). Elution was performed in an analytical column (BEH130 C18; Waters) with a binary gradient of buffer A (0.1% [vol/vol] acetic acid) and B (100% [vol/vol] acetonitrile, 0.1% [vol/vol] acetic acid) over a period of 80 min with a flow rate of 400 nl/min. The LTQ Orbitrap was operated in data-dependent tandem MS (MS-MS) mode using multistage activation for phospho-relevant masses. Proteins were identified by searching all MS-MS spectra in .dta format against all M. pneumoniae proteins (extracted from the NCBI database [http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genome&Cmd=Retrieve&dopt=Protein+Table&list_uids=113]) using SEQUEST (Bioworks 3.3.1/Sequest version 2.7, revision 11; Thermo Electron). Initial mass tolerances for peptide identification on MS and MS-MS peaks were 10 ppm and 1 Da, respectively. Up to two missed tryptic cleavages were allowed. Methionine oxidation (+15.99492 Da) was set as a variable modification. Proteins were identified by at least two peptides by applying a stringent SEQUEST filter (Xcorr versus charge state of 1.90 for singly charged ions, 2.2 for doubly charged ions, 3.3 for triply charged ions, and 3.75 for higher-charged ions). Phosphorylated peptides that passed this filter were examined manually and accepted only when b or y ions confirmed the phosphorylation site.

Western blot analysis.

For Western blot analysis, M. pneumoniae cell extracts were separated on SDS polyacrylamide gels (6% to 12%). After electrophoresis, the proteins were transferred onto a polyvinylidene difluoride membrane (Bio-Rad) by electroblotting. The proteins of interest were detected with polyclonal antibodies raised against these proteins. The antibodies used in this study are listed in Table S2 in the supplemental material. Antibodies were visualized by using anti-rabbit immunoglobulin G-alkaline phosphatase secondary antibodies (Promega) and the CDP-Star detection system (Roche Diagnostics). The quantification was performed using Image J software version 1.42 (1).

Southern blot analysis.

For the preparation of M. pneumoniae chromosomal DNA, cells of a 100-ml culture were harvested as described previously (17). The cell pellet was resuspended in 750 μl 50 mM Tris-HCl, pH 8.0, and 25 mM EDTA, and RNase A was added to a final concentration of 25 μg/ml. After an incubation step at 37°C for 15 min, 50 μl proteinase K (25 mg/ml) and 75 μl 10% SDS were added. The mixture was incubated at 50°C until the lysate was clarified and subsequently cooled down on ice. To precipitate debris, 300 μl 5 M NaCl was added, and the mixture was incubated for 20 min on ice. The precipitate was pelleted by centrifugation (25 min, 15,000 × g, 4°C), and the resulting supernatant was mixed with 500 μl isopropanol to precipitate the chromosomal DNA. The DNA pellet was washed with 70% ethanol and finally resolved in 300 μl Tris-EDTA buffer. Digests of chromosomal DNA were separated using 1% agarose gels, transferred onto a positively charged nylon membrane (Roche Diagnostics) (29), and probed with digoxigenin (DIG)-labeled riboprobes obtained by in vitro transcription with T7 RNA polymerase (Roche Diagnostics) using PCR-generated fragments as templates. Primer pairs for the amplification of prkC and aac-ahpD gene fragments were CH74/SH89 and SH62/SH63, respectively (see Table S1 in the supplemental material). The reverse primers contained a T7 RNA polymerase recognition sequence. In vitro RNA labeling, hybridization, and signal detection were carried out according to the manufacturer's instructions (DIG RNA labeling kit and detection chemicals; Roche Diagnostics).

Analysis of mRNA amounts.

Preparation of total M. pneumoniae RNA was done as described previously (17). For slot blot analysis, serial twofold dilutions of the RNA extract in 10× SSC (1× SSC is 0.15 M NaCl plus 0.015 M sodium citrate) (2 μg to 0.25 μg) were blotted onto a positively charged nylon membrane using a PR 648 slot blot manifold (Amersham Biosciences). Equal amounts of yeast tRNA (Roche) and M. pneumoniae chromosomal DNA served as controls. DIG-labeled riboprobes were obtained by in vitro transcription from PCR products that cover open reading frame internal sequences using T7 RNA polymerase (Roche). The reverse primers used to generate the PCR products contained a T7 promoter sequence (see Table S1 in the supplemental material). The quantification was performed using Image J software version 1.42 (1).

HeLa cell cytotoxicity assay.

HeLa cells were grown in 24-well plates with 2.5 × 104 cells per well in 700 μl Dulbecco modified Eagle medium for 24 h at 37°C and 5% CO2. The M. pneumoniae cultures were grown for 96 h at 37°C. The M. pneumoniae cells were then washed three times with 67.6 mM HEPES, pH 7.3; 140 mM NaCl; and 7 mM MgCl2. The M. pneumoniae cells were resuspended with a 0.4- by 20-mm needle. Depending on the size of the pellet, they were resuspended in 5 to 8 ml buffer. The cell suspensions were adjusted to an A550 of 0.1 and centrifuged for 5 min at 10,000 rpm at 4°C. The pellet was resuspended in 125 μl of modified Hayflick medium with a 0.4- by 20-mm needle. The cells were then pipetted onto the lawn of HeLa cells and incubated for 2 h at 37°C and 5% CO2. Then the supernatant was removed and replaced by 700 μl Dulbecco modified Eagle medium, and the cells were incubated. The cytotoxicity assays were performed in triplicate.

RESULTS

Isolation of an M. pneumoniae prkC mutant.

To get more insights into the function of the protein kinase PrkC (MPN248), we attempted to isolate prkC mutants. This was done using “haystack mutagenesis” (18). This strategy is based on an ordered collection of pooled random transposon insertion mutants that can be screened for junctions between the transposon and the gene of interest due to transposon insertion. Sixty-four pools containing 2,976 individual mutants (18) were used in a PCR to detect junctions between the prkC gene and the minitransposon using the oligonucleotides CH35 and SH29 for prkC and the minitransposon, respectively (Fig. (Fig.1A).1A). For one pool that gave a positive signal, colony PCR with the 50 individual mutants resulted in the identification of one prkC mutant. The presence of the transposon insertion in prkC was verified by Southern blot analysis using a prkC-specific probe (Fig. (Fig.1B).1B). To test whether this strain contained only a unique transposon insertion, we did another Southern blotting using a probe specific for the aac-aphD resistance gene present on the minitransposon. As shown in Fig. Fig.1B,1B, only a single band hybridizing with this probe was detected; moreover, this fragment had the same size as that of the XhoI fragment hybridizing to the prkC probe (Fig. (Fig.1B).1B). The isolated prkC mutant strain was designated GPM11. The position of the transposon insertion in the prkC gene of M. pneumoniae GPM11 was determined by DNA sequencing. The prkC gene was disrupted between nucleotides 313 and 314, resulting in a truncated protein of 106 amino acids, with one additional amino acid and the following stop codon encoded by the inserted minitransposon. The disruption destroyed the kinase domain of PrkC (amino acids 80 to 256), suggesting that no active PrkC is present in the mutant strain.

FIG. 1.
Isolation of an M. pneumoniae prkC transposon insertion mutant. (A) Schematic representation of the genomic region surrounding the prkC gene in M. pneumoniae and site of the transposon insertion in the prkC knockout strain GPM11. The annealing sites of ...

Implication of PrkC in adherent growth and cytotoxicity.

For an initial characterization of the prkC mutant strain GPM11, we observed growth of this strain in modified Hayflick medium. A comparison of the growths of the wild type and the prkC mutant strain revealed that both strains grow at the same rate in the presence of glucose as the carbon source (data not shown). However, in contrast to its isogenic wild type, GPM11 was unable to attach to the surface of the culture flask, and the cells grew as a suspension in liquid medium.

This loss of adherent growth suggested that the prkC mutant might also be impaired in cytotoxicity. To assess the cytotoxicity of the prkC mutant strain, we infected confluently grown HeLa cell cultures with M. pneumoniae cells (multiplicity of infection of 2). The cytotoxicity of the prkC mutant was compared to that of wild-type strain M129 and M. pneumoniae GPM68, which is affected in prpC, the protein phosphatase that is thought to be the antagonist of PrkC. As shown in Fig. Fig.2,2, the HeLa cells underwent lysis after 6 days upon infection with wild-type M. pneumoniae. In contrast, a large portion of viable cells was observed after infection of the cell culture with prkC mutant GPM11. In contrast, cytotoxicity induced by prpC mutant strain GPM68 was equivalent to that of the wild-type strain (Fig. (Fig.2B).2B). These data clearly demonstrate that PrkC is required for host cell damage, whereas PrpC is not. This suggests that PrkC-dependent protein phosphorylation is an important factor for cytotoxicity.

FIG. 2.
Cytotoxicity of M. pneumoniae toward HeLa cell cultures. (A) Infection assay with the M. pneumoniae prkC::Tn strain GPM11 and the prpC::Tn strain GPM68. HeLa cell culture without M. pneumoniae (left top; control); HeLa cell culture incubated with wild-type ...

Identification of proteins that are subject to PrkC-dependent phosphorylation.

The loss of adherent growth and cytotoxicity in the prkC mutant suggested that proteins that are phosphorylated by PrkC might be involved in these functions. To identify such proteins, we separated whole-cell extracts of M. pneumoniae by SDS-PAGE. The proteins were consecutively stained with Pro-Q Diamond, a dye for the detection of Ser/Thr/Tyr-phosphorylated proteins, and with Flamingo fluorescence stain for the detection of the total proteins. For this analysis, we compared the wild-type strain M129 and the prkC mutant GPM11. As a control, we used the prpC mutant GPM68. Since PrpC is thought to be the antagonist of PrkC, we expected to observe a more intense phosphorylation of PrkC target proteins with this mutant. In addition, we used a mutant affected in the other identified protein kinase of M. pneumoniae, HPrK (GPM51), and a mutant deficient in the surface protein MPN474, which is not thought to be implicated in protein phosphorylation (GPM70) (24). Several of the proteins that are involved in cytadherence in M. pneumoniae are very large proteins, such as HMW1, HMW2, and HMW3. It has been shown that these proteins are phosphorylated in M. pneumoniae (24, 33). Therefore, we decided to analyze specifically the phosphorylation pattern of large proteins by using 6% SDS-polyacrylamide gels. A comparison of the total protein patterns in the wild type and the prkC mutant strain revealed that the quantity of four proteins was severely reduced (Fig. (Fig.3A).3A). These protein bands were identified by MS as the three high-molecular-weight proteins HMW1, HMW2, and HMW3 and the major adhesin P1. The amounts of these four proteins in the prpC mutant were indistinguishable from those of the wild-type strain, suggesting that PrkC is necessary for their accumulation in the cell. The quantitative analysis of the Pro-Q Diamond signal intensities for the detection of phosphorylated proteins revealed that the bands of these proteins were absent or much weaker in the prkC mutant (Fig. 3B and C). In contrast, the phosphorylation signals of HMW1, HMW3, and P1 were more intense in the prpC phosphatase mutant than in the wild type (Fig. (Fig.3C).3C). This observation indicated the accumulation of phosphorylated protein that cannot be dephosphorylated by the cognate protein phosphatase. In turn, this suggests that these proteins are targets of PrkC-dependent phosphorylation and that phosphorylation plays a role in their accumulation. In addition, one protein with an apparent molecular mass of 160 kDa accumulates in the prpC mutant and shows also a new very strong phosphorylation signal in this mutant (Fig. (Fig.3B).3B). This protein is the acidic surface protein MPN474.

FIG. 3.
Comparison of protein profile and in vivo phosphorylation patterns in M. pneumoniae wild-type and mutant cells. Whole-cell extracts of the M. pneumoniae wild type and different mutant strains were analyzed by SDS-PAGE and stained with Pro-Q Diamond (Invitrogen) ...

Impact of PrkC on the accumulation of cytadherence proteins.

It has been shown that HMW2 mutants of M. pneumoniae are impaired in the accumulation of other cytadherence proteins, such as HMW1, HMW3, and MPN309 (P65) (6). Since the amounts of the HMW proteins were reduced in the prkC mutant, we determined the cellular amounts of other cytadherence proteins by use of specific polyclonal antibodies raised against these proteins (Table (Table11 provides a summary of the results). As controls, we used the elongation factor G (FusA) and the MPN567 (P200) protein, which is required for gliding motility (23). The amounts of both proteins were virtually identical in all strains tested in this study (Fig. (Fig.4C4C).

FIG. 4.
Western blot analyses of expression profiles of M. pneumoniae cytadherence proteins. Whole-cell extracts of the M. pneumoniae wild type and different mutant strains were separated by SDS-PAGE and blotted onto a polyvinylidene difluoride membrane. Cytadherence ...
TABLE 1.
Summary of Western blot analyses with a prkC::Tn mutant (GPM11)

First, we studied the proteins encoded by one gene cluster containing the gene encoding HMW2 (the so-called P65 operon). As shown in Fig. Fig.4A,4A, the cellular amounts of all these proteins are significantly reduced in the prkC mutant. In fact, the HMW2 protein and HMW2-S (also called P28), a second translation product of the same mRNA (7), are nearly completely absent in the prkC mutant strain. The accumulation of all the proteins encoded by the gene cluster is not affected by a disruption of the prpC gene (Fig. (Fig.4A).4A). Thus, the phosphorylation of these proteins seems to be essential for their accumulation. The so-called HMW gene cluster encodes the HMW1, HMW3, and MPN453 (P30) proteins. As observed for HMW2, the two high-molecular-weight proteins encoded by this gene cluster are much less abundant in the prkC mutant, whereas none of the other tested mutations had any effect. The accumulation of MPN453 was also somewhat reduced, but to a lesser extent (Fig. (Fig.4B).4B). Finally, we assayed the amounts of the major adhesins MPN141 (P1) and MPN142 (P40) and of the surface protein MPN474, which was shown to be phosphorylated by PrkC (Fig. (Fig.3).3). As shown for the large cytadherence proteins, many fewer adhesins were detected in the prkC mutant than in the wild type or all other strains. In contrast, the cellular amounts of MPN474 were not affected by the prkC mutation. As expected, the antibodies do not cross-react with any protein in the MPN247 mutant strain GPM70.

Transcription of the genes encoding cytadherence proteins in mutants affecting protein phosphorylation.

The virtual absence of cytadherence proteins in the prkC mutant can be explained by two alternative scenarios: (i) the expression of the corresponding genes and the accumulation of their mRNAs might require some kind of PrkC-dependent protein phosphorylation and (ii) the proteins might be translated to a lesser extent or be subject to rapid degradation. To distinguish between these possibilities, we compared the amounts of the mRNAs of the cytadherence genes in the wild-type strain M129 and in our set of mutants that are affected in protein (de)phosphorylation. For this purpose, we isolated RNA from cultures grown in modified Hayflick medium supplemented with glucose and performed slot blot analyses.

For the P65 operon, we observed similar amounts of mRNA for the two proximal genes of the operon, MPN309 (encoding P65) and hmw2 (encoding HMW2) in the wild type and in the kinase and phosphatase mutants (Fig. (Fig.5A).5A). This observation is in sharp contrast to the strongly reduced amounts of the corresponding proteins in the prkC mutant (Fig. (Fig.4A).4A). For the two distal genes of the operon, MPN311 (P41) and MPN312 (P24), we observed a slight reduction of mRNA amounts in the prkC mutant (Fig. (Fig.5A).5A). These reduced mRNA levels might explain the weak reduction of P24 protein accumulation, but they are not sufficient to account for the strongly reduced P41 amounts in the prkC mutant strain GPM11.

FIG. 5.
Expression of cytadherence genes in M. pneumoniae wild-type and mutant cells. Slot blot analyses with whole-RNA extracts of the M. pneumoniae wild type and different mutant strains. A dilution series of RNA extracts was blotted onto a positively charged ...

The genes of the HMW and the adhesin (P1 and P40) operons were all expressed at similar levels in the wild type as well as in the prkC, hprK, and prpC mutant strains (Fig. (Fig.5B).5B). Again, the mRNA amounts were not affected by the prkC mutation, whereas the protein amounts were strongly reduced (Fig. (Fig.4C).4C). This is in good agreement with the observations for the P65 operon and supports the conclusion that PrkC-dependent protein phosphorylation is implicated in the stability of the cytadherence and adhesion proteins in M. pneumoniae.

DISCUSSION

Protein phosphorylation is a major mechanism to control the activities of proteins. This posttranslational modification has been observed with all organisms for which it has been studied, including the minimal bacteria M. genitalium and M. pneumoniae (33; this work). However, the physiological consequences of protein phosphorylation events in bacteria, as well as the responsible kinases, have remained largely unknown.

So far, only a few classes of serine/threonine protein kinases have been identified and characterized for bacteria. M. pneumoniae contains two of these protein kinases, HPrK and PrkC (31; this work). While HPrK is generally thought to phosphorylate only one specific substrate, the HPr protein of the phosphotransferase system, a variety of substrates have been proposed for PrkC and its homologues in different gram-positive bacteria. In Bacillus subtilis, PrkC was shown to phosphorylate the elongation factors Tu and G, the small-ribosome-associated GTPase CpgA, and the potential stressosome component YezA (2, 30). PrkC is required for germination of B. subtilis spores in response to muropeptides (30). The extracellular PASTA domain of PrkC senses these muropeptides (30). Since M. pneumoniae neither sporulates nor possesses a peptidoglycan cell wall, it is not surprising that the PrkC protein of this bacterium does not contain a PASTA domain. Thus, it is safe to assume that M. pneumoniae PrkC has a function(s) that differs completely from that described for B. subtilis. Indeed, this work provides evidence that PrkC is required for adhesive growth of M. pneumoniae, and a prkC mutant has lost cytotoxicity. This is reminiscent of observations that have been made with several other pathogenic firmicutes. In Streptococcus pyogenes, the homolog of PrkC is required for adherence to host cells and for invasion (21). Similarly, the kinase of Enterococcus faecalis is implicated in persistence in the intestine of mice (25). In contrast, PrkC of Staphylococcus aureus was reported to phosphorylate glycolytic enzymes (26).

While the importance of PrkC-dependent protein phosphorylation is well established for many bacteria, the molecular consequences of the primary phosphorylation events have not been studied so far. Most often, protein phosphorylation results in a shift of a protein's activity (22).

In this work, we observed that PrkC-dependent phosphorylation of large cytadherence proteins is required for the stability of these complexes. It is unknown which of these proteins is responsible for the destabilization of cytadherence proteins in the prkC mutant, but our studies revealed that HMW1, HMW3, the major adhesin P1, and the surface protein MPN474 are subject to PrkC-dependent phosphorylation. This conclusion is supported not only by the absence of these proteins in cell extracts of the prkC mutant but also by the increased intensity of phosphorylation signals for these proteins in the prpC mutant strain. PrpC is the protein phosphatase that reverses PrkC-dependent protein phosphorylation. Thus, our work confirms and extends earlier reports on the phosphorylation of cytadherence proteins (24, 33). We can not exclude, however, the possibility that an additional kinase(s) might phosphorylate HMW3 and P1 (Fig. (Fig.3C).3C). It is well established that the cytadherence proteins show reciprocal dependency in their stabilities, i.e., mutations in one of the corresponding genes result in destabilization and delocalization of the other proteins of the attachment structure (5, 28, 35). Specifically, HMW1 was shown to be required for HMW2 and P1 localization and stability. In turn, HMW2 is necessary for the stabilization of HMW3 and P65. As shown in this work, it has been suggested previously that the interdependence of the proteins of the attachment organelle does not involve reduced transcription (28). Taken together, these findings establish that phosphorylation of the HMW proteins by PrkC is a prerequisite for their stability and perhaps for their proper localization in the attachment structure. This is the first time that protein phosphorylation was shown to increase the stability of a protein.

M. pneumoniae has only limited regulatory potential. These bacteria may use, in addition to three potential transcription regulators, protein phosphorylation to adapt to changes in environmental conditions. An analysis of the M. pneumoniae genome revealed the presence of two genes for serine/threonine kinases, i.e., hprK and prkC, encoding the HPr kinase and protein kinase C (PrkC), respectively. Based on our present knowledge, it appears that these two proteins represent the total serine/threonine kinome of M. pneumoniae. It will be interesting to study how PrkC activity is triggered and whether other proteins are targets of this pleiotropic protein kinase.

Supplementary Material

[Supplemental material]

Acknowledgments

We are grateful to Richard Herrmann for the gift of antibodies. Hinnerk Eilers is acknowledged for helpful discussions.

This work was supported by Deutsche Forschungsgemeinschaft and the Fonds der Chemischen Industrie. S.R.S. was supported by a personal grant from the Studienstiftung des Deutschen Volkes.

Notes

Editor: A. Camilli

Footnotes

[down-pointing small open triangle]Published ahead of print on 26 October 2009.

Supplemental material for this article may be found at http://iai.asm.org/.

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