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96 shRNAs designed for maximal coverage of HIV-1 variants
Glen John Mcintyre, Jennifer Lynne Groneman, Yi-Hsin Yu, Angel Jaramillo, Sylvie Shen, Tanya Lynn Applegate
Retrovirology. 2009; 6: 55. Published online 2009 June 4. doi: 10.1186/1742-4690-6-55
PMCID:
PMC2698899
Abstract Full Text PDF–568K Supplementary Material

Is Cited by the Following 8 Articles in this Archive:

SHAPE-directed Discovery of Potent shRNA Inhibitors of HIV-1
Justin T Low, Stefanie A Knoepfel, Joseph M Watts, Olivier ter Brake, Ben Berkhout, Kevin M Weeks
Mol Ther. 2012 April; 20(4): 820–828. Published online 2012 February 7. doi: 10.1038/mt.2011.299
PMCID:
PMC3321596
Free in PMC on 2013/04/01
HIVsirDB: A Database of HIV Inhibiting siRNAs
Atul Tyagi, Firoz Ahmed, Nishant Thakur, Arun Sharma, Gajendra P. S. Raghava, Manoj Kumar
PLoS One. 2011; 6(10): e25917. Published online 2011 October 11. doi: 10.1371/journal.pone.0025917
PMCID:
PMC3191155
Abstract Full Text PDF–382K Supplementary Material
A comparison of multiple shRNA expression methods for combinatorial RNAi
Glen J Mcintyre, Allison J Arndt, Kirsten M Gillespie, Wendy M Mak, Gregory C Fanning
Genet Vaccines Ther. 2011; 9: 9. Published online 2011 April 17. doi: 10.1186/1479-0556-9-9
PMCID:
PMC3098768
Abstract Full Text PDF–472K
Multiple shRNA combinations for near-complete coverage of all HIV-1 strains
Glen J Mcintyre, Jennifer L Groneman, Yi-Hsin Yu, Anna Tran, Tanya L Applegate
AIDS Res Ther. 2011; 8: 1. Published online 2011 January 13. doi: 10.1186/1742-6405-8-1
PMCID:
PMC3033792
Abstract Full Text PDF–830K Supplementary Material
An RNAi in silico approach to find an optimal shRNA cocktail against HIV-1
María C Méndez-Ortega, Silvia Restrepo, Luis M Rodríguez-R, Iván Pérez, Juan C Mendoza, Andrés P Martínez, Roberto Sierra, Gloria J Rey-Benito
Virol J. 2010; 7: 369. Published online 2010 December 20. doi: 10.1186/1743-422X-7-369
PMCID:
PMC3022682
Abstract Full Text PDF–1.6M Supplementary Material
In silico modeling indicates the development of HIV-1 resistance to multiple shRNA gene therapy differs to standard antiretroviral therapy
Tanya Lynn Applegate, Donald John Birkett, Glen John Mcintyre, Angel Belisario Jaramillo, Geoff Symonds, John Michael Murray
Retrovirology. 2010; 7: 83. Published online 2010 October 9. doi: 10.1186/1742-4690-7-83
PMCID:
PMC2959037
Abstract Full Text PDF–599K
Anticipating and blocking HIV-1 escape by second generation antiviral shRNAs
Nick CT Schopman, Olivier ter Brake, Ben Berkhout
Retrovirology. 2010; 7: 52. Published online 2010 June 8. doi: 10.1186/1742-4690-7-52
PMCID:
PMC2898777
Abstract Full Text PDF–695K
Cassette deletion in multiple shRNA lentiviral vectors for HIV-1 and its impact on treatment success
Glen J Mcintyre, Yi-Hsin Yu, Anna Tran, Angel B Jaramillo, Allison J Arndt, Michelle L Millington, Maureen P Boyd, Fiona A Elliott, Sylvie W Shen, John M Murray, Tanya L Applegate
Virol J. 2009; 6: 184. Published online 2009 October 30. doi: 10.1186/1743-422X-6-184
PMCID:
PMC2775741
Abstract Full Text PDF–1.2M
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