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Evolutionary rates and centrality in the yeast gene regulatory network
Richard Jovelin, Patrick C Phillips
Genome Biol. 2009; 10(4): R35. Published online 2009 April 9. doi: 10.1186/gb-2009-10-4-r35
PMCID:
PMC2688926
Abstract Full Text PDF–279K
 Is Cited by the Following 11 Articles in this Archive:
Expression Level Drives the Pattern of Selective Constraints along the Insulin/Tor Signal Transduction Pathway in Caenorhabditis
Richard Jovelin, Patrick C. Phillips
Genome Biol Evol. 2011; 3: 715–722. Published online 2011 August 17. doi: 10.1093/gbe/evr071
PMCID:
PMC3157841
Abstract Full Text PDF–271K
Difference in the distribution pattern of substrate enzymes in the metabolic network of Escherichia coli, according to chaperonin requirement
Kazuhiro Takemoto, Tatsuya Niwa, Hideki Taguchi
BMC Syst Biol. 2011; 5: 98. Published online 2011 June 24. doi: 10.1186/1752-0509-5-98
PMCID:
PMC3146850
Abstract Full Text PDF–651K Supplementary Material
The Effects of Network Neighbours on Protein Evolution
Guang-Zhong Wang, Martin J. Lercher
PLoS One. 2011; 6(4): e18288. Published online 2011 April 12. doi: 10.1371/journal.pone.0018288
PMCID:
PMC3075247
Abstract Full Text PDF–343K
Expression level, cellular compartment and metabolic network position all influence the average selective constraint on mammalian enzymes
Corey M Hudson, Gavin C Conant
BMC Evol Biol. 2011; 11: 89. Published online 2011 April 6. doi: 10.1186/1471-2148-11-89
PMCID:
PMC3082228
Abstract Full Text PDF–1.3M Supplementary Material
Evolution combined with genomic study elucidates genetic bases of isobutanol tolerance in Escherichia coli
Jeremy J Minty, Ann A Lesnefsky, Fengming Lin, Yu Chen, Ted A Zaroff, Artur B Veloso, Bin Xie, Catie A McConnell, Rebecca J Ward, Donald R Schwartz, Jean-Marie Rouillard, Yuan Gao, Erdogan Gulari, Xiaoxia Nina Lin
Microb Cell Fact. 2011; 10: 18. Published online 2011 March 25. doi: 10.1186/1475-2859-10-18
PMCID:
PMC3071312
Abstract Full Text PDF–4.0M Supplementary Material
Molecular Evolution, Mutation Size and Gene Pleiotropy: A Geometric Reexamination
Pablo Razeto-Barry, Javier Díaz, Darko Cotoras, Rodrigo A. Vásquez
Genetics. 2011 March; 187(3): 877–885. doi: 10.1534/genetics.110.125195
PMCID:
PMC3048784
Abstract Full Text PDF–829K
Molecular population genetics and selection in the glycolytic pathway
Walter F. Eanes
J Exp Biol. 2011 January 15; 214(2): 165–171. doi: 10.1242/jeb.046458
PMCID:
PMC3183487
Abstract Full Text
The evolutionary rate variation among genes of HOG-signaling pathway in yeast genomes
Xuechang Wu, Xiaoqin Chi, Pinmei Wang, Daoqiong Zheng, Rui Ding, Yudong Li
Biol Direct. 2010; 5: 46. Published online 2010 July 10. doi: 10.1186/1745-6150-5-46
PMCID:
PMC2914728
Abstract Full Text PDF–878K
Protein evolution in yeast transcription factor subnetworks
Yong Wang, Eric A. Franzosa, Xiang-Sun Zhang, Yu Xia
Nucleic Acids Res. 2010 October; 38(18): 5959–5969. Published online 2010 May 13. doi: 10.1093/nar/gkq353
PMCID:
PMC2952844
Abstract Full Text PDF–457K Supplementary Material
Lineage-specific transcription factors and the evolution of gene regulatory networks
Katja Nowick, Lisa Stubbs
Brief Funct Genomics. 2010 January; 9(1): 65–78. Published online 2010 January 16. doi: 10.1093/bfgp/elp056
PMCID:
PMC3096533
Abstract Full Text PDF–303K
Network analyses in systems pharmacology
Seth I. Berger, Ravi Iyengar
Bioinformatics. 2009 October 1; 25(19): 2466–2472. Published online 2009 July 30. doi: 10.1093/bioinformatics/btp465
PMCID:
PMC2752618
Abstract Full Text PDF–486K
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