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Diverse hematopoietic potentials of five human embryonic stem cell lines aDepartment of Medicine, Hematology Division, University of Washington, 1705 NE Pacific Street, Box 357710, Seattle, WA, USA bDepartment of Comparative Medicine, University of Washington, USA cDepartment of Medicine, Medical Genetics Division, University of Washington, USA * Corresponding author. Fax: +1 206 543 3560. E-mail address: thalp/at/u.washington.edu (T. Papayannopoulou). The publisher's final edited version of this article is available at Exp Cell Res.Abstract Despite a growing body of literature concerning the hematopoietic differentiation of human embryonic stem cells (hESCs), the full hematopoietic potential of the majority of existing hESC lines remains unknown. In this study, the hematopoietic response of five NIH-approved hESC lines (H1, hSF6, BG01, BG02, and BG03) was compared. Our data show that despite expressing similar hESC markers under self-renewing conditions and initiating mesodermal differentiation under spontaneous differentiation conditions, marked differences in subsequent hematopoietic differentiation potential among these lines existed. A high degree of hematopoietic differentiation was attained only by H1 and BG02, whereas this process appeared to be abortive in nature for hSF6, BG01, and BG03. This difference in hematopoietic differentiation predisposition was readily apparent during spontaneous differentiation, and further augmented under hematopoietic-inducing conditions. This predisposition appeared to be intrinsic to the specific hESC line and independent of passage number or gender karyotype. Interestingly, H1 and BG02 displayed remarkable similarities in their kinetics of hematopoietic marker expression, hematopoietic colony formation, erythroid differentiation, and globin expression, suggesting that a similar, predetermined differentiation sequence is followed. The identification of intrinsic and extrinsic factors governing the hematopoietic differentiation potential of hESCs will be of great importance for the putative clinical utility of hESC lines. Keywords: Human embryonic stem cells, Mesodermal differentiation, Hematopoiesis, Hematopoietic differentiation, Erythroid, Erythropoietic differentiation, Globin expression Introduction Human embryonic stem cells (hESCs) are derived from the inner cell mass (ICM) of blastocysts [1]. They can be maintained in culture for prolonged periods of time while retaining a normal karyotype. Furthermore, they are totipotent cells that can differentiate into derivatives of all three germ layers [2]. To date, a variety of cells have been derived from hESCs including cardiomyocytes, hematopoietic cells, endothelial cells, neurons, neuroglia, oligodendrocytes, insulin-producing cells, hepatocyte-like cells, trophoblasts, and germ cells [3]. HESCs may serve as a putative source of donorless hematopoietic stem cells. The cotransplantation of hESC-derived hematopoietic cells with hESC-derived non-hematopoietic tissues or organs may also facilitate the development of graft tolerance, as shown in patients receiving bone marrow and liver transplants from the same donors [4,5]. Therefore, hematopoietic differentiation of hESCs is an important branch of hESC studies that is of both biological significance and clinical relevance. Over 200 different hESC lines have been established worldwide [6] but only eight of them have been characterized in terms of their hematopoietic differentiation patterns with the three WiCell lines (H1, H7 and H9) dominating >90% of that literature [7-36] and no specific comparison among lines have been made. In this study, we compared a total of five NIH-approved hESC lines (H1, hSF6, BG01, BG02, and BG03), established by three independent laboratories in their ability to differentiate along the hematopoietic lineage using a protocol that has been shown to induce high levels of hematopoietic differentiation in H1 cells [17]. We showed that in addition to the widely used H1, only BG02 was capable of being induced to generate substantial output of hematopoietic cells, whereas the other three lines (hSF6, BG01, and BG03) showed little evidence of hematopoietic differentiation under similar culture conditions. The implications of these findings are discussed. Materials and methods Maintenance and differentiation of human embryonic stem cells Five hESC lines: H1 (NIH code WA01, WiCell, Madison, WI), hSF6 (NIH code UC06, University of California, San Francisco, CA), BG01, BG02, and BG03 (all three were from BresaGen, Athens, GA) (NIH codes: BG01, BG02, and BG03) were used in this study. H1, BG01, and BG02 had the karyotype of 46, XY, whereas hSF6 and BG03 had the karyotype of 46, XX. All five lines have been converted to enzymatic passage and propagated under uniform culture conditions as previously described [37]. The characterizations of these five lines have been published previously [6,37-39]. When cultured under self-renewing conditions, all five lines express conventional hESC markers including SSEA-3, SSEA-4, Oct-4, and display high alkaline phosphatase activity (Fig. 1
To induce hematopoietic differentiation, a previously described protocol was employed with slight modifications [17]. Briefly, undifferentiated hESC colonies were harvested off the murine embryonic fibroblast feeders and plated onto ultralow attachment plates (Corning, Acton, MA) in the EB medium [17] supplemented with 0.3% methylcellulose (BD Biosciences) for 14 days at 37 °C, 5% CO2 in a humidified incubator. At the end of the EB culture, EBs were transferred to tissue culture plates (BD falcon) pre-coated with matrigel (BD Biosciences, San Jose, CA) and cultured in the hematopoietic growth and expansion medium supplemented with a combination of growth factors [17]. The non-adherent cells and adherent cells were harvested after 7 days for analyses. To induce erythroid differentiation, EBs were harvested on day-7, dissociated by treatment with 0.05% collagenase IA (Sigma, St Louis, MO) and 0.05% dispase (Invitrogen, Carlsbad, CA) supplemented with 20% fetal bovine serum (FBS) (Hyclone, Logan, UT) at 37 °C for 45 min. The reaction was stopped by incubating the mixture on ice for 5 min. After incubation, EBs were passed through a 20 G needle for 10 times, then through a 18 G needle for 5 times. Cells were then washed twice with PBS supplemented with 0.5% bovine serum albumin (PBS-BSA), centrifuged at 450 ×g for 5 min, filtered through a 41 μM nylon filter, and resuspended in the erythroid-inducing medium consisted of Stemline hematopoietic stem cell growth and expansion medium (Sigma) supplemented with 2mM l-glutamine, 1× penicillin/streptomycin, 0.1 mM MEM non-essential amino acids (all from Mediatech, Herndon, VA), 0.1 mM beta-mercaptoethanol, 200 μg/ml iron-saturated transferrin, 10 μM ethanolamine, 10 μg/ml insulin (all from Sigma), 6 U/ml erythropoietin, 50 ng/ml stem cell factor (both from Amgen, Thousand Oakes, CA), 20 ng/ml interleukin-3, 20 ng/ml interleukin-6, 40 ng/ml insulin-like growth factor-1, 10 ng/ml vascular endothelial growth factor (all from Peprotech, Rocky Hill, NJ), 5% protein free hybridoma medium, 1× insulin-transferrin-selenium (both from Invitrogen), and 1× EX-CYTE (Millipore, Billerica, MA). Cells were harvested 10−15 days later for analyses. CD34+ cells from healthy volunteer-donor mobilized peripheral blood (PB) and from fetal liver cells (50−100-day gestation) were cultured in the erythroid-inducing medium to generate adult- and fetal-type erythroid cells to use as controls. PB-derived CD34+ cells were received from the NIH repository (Fred Hutchinson Cancer Research Center), and fetal liver cells were received from the fetal tissue repository (University of Washington Birth Defects Research Laboratory), both with permission of the University of Washington Institutional Review Board. Gene expression analysis RNA was prepared using RNeasy Micro kit or RNeasy Mini kit (both from Qiagen, Valencia, CA) per manufacturer's instructions with RNase-free DNase (Qiagen) treatment. First-strand cDNA was reversed transcribed with oligo(dT)18 priming using First Strand cDNA synthesis Kit (Fermentas, Glen Burnie, MD) per manufacturer's instructions. The expression levels of α-fetoprotein (AFP), neurofilament heavy chain (NFH), BRACHYURY, RENIN, stem cell leukemia (SCL) gene, runt-related transcription factor 1 (RUNX1), GATA binding protein 1 (GATA1), GATA2, and glyceraldehydes-3-phosphate dehydrogenase (GAPDH) were determined by quantitative real-time polymerase chain reactions using FastStart SYBR Green Master (Roche Applied Science, Indianapolis, IN) in the MJ Research DNA Engine Opticon 2 (Bio-rad, Hercules, CA) and analyzed with MJ Opticon Monitor Analysis Software Version 2.02. The PCR conditions were: 15 min at 95 °C, followed by 40 cycles of 30 s at 95 °C, 1 min at 60 °C, and 1 min at 72 °C, and then 5 min at 72 °C, followed by melting curve analysis. All primers except for GATA2 were selected from qPrimerDepot (available at http://primerdepot.nci.nih.gov) [40]. The following primers were used: AFP forward, GTG GTC AGT TTG CAG CAT TC; AFP reverse, AGA GGA GAT GTG CTG GAT TG; NFH forward, CAA AGC CAA TCC GAC ACT CT; NFH reverse, CAG GAC CTG CTC AAT GTC AA; BRACHYURY forward, TGC TCA CAG ACC ACA GGC; BRACHYURY reverse, AAT TGG TCC AGC CTT GGA A; RENIN forward, ACC TCG TTC CTT CAG GCT TT, RENIN reverse, GTA CCT TTG GTC TCC CGA CA; SCL forward, AAG ATA CGC CGC ACA ACT TT; SCL reverse, GCC TTC CCT ATG TTC ACC AC; RUNX1 forward, CAA TGG ATC CCA GGT ATT GG; RUNX1 reverse, CAC TGC CTT TAA CCC TCA GC; GATA1 forward, CAG GCC AGG GAA CTC CA; GATA1 reverse, ATC ACA CTG AGC TTG CCA CA; GATA2 forward, AAG GCT CGT TCC TGT TCA GA; GATA2 reverse, GGC ATT GCA CAG GTA GTG G; GAPDH forward, AAT GAA GGG GTC ATT GAT GG; and GAPDH reverse, AAG GTG AAG GTC GGA GTC AA. The expression of globin mRNA was analyzed using RNase protection assay as previously described [17]. Phenotypic analysis The immunophenotype of cells was analyzed using flow cytometry analysis. Cells were stained with stage-specific embryonic antigen 3 (SSEA-3) (Developmental Studies Hybridoma Bank, University of Iowa, Iowa City, IA) followed by goat anti-rat-IgM-Phycoerythrin (PE) (Southern Biotech, Birmingham, AL), SSEA-4 (Developmental Studies Hybridoma Bank) followed by goat anti-mouse-IgG-fluorescein isothiocyanate (FITC) (Sigma), glycophorin (Gly)-A-PE (DAKO, Glostrup, Denmark), CD34-PE, CD45-Allophycocyanin (APC), CD31-PE, CD71-FITC, CD117-PE, or CD41-FITC (all from BD Biosciences). After staining, cells were washed and resuspended in PBS-BSA containing 100 ng/ml propidium iodide (Sigma) for dead cell exclusion. Cells were acquired using FACScalibur (BD Biosciences), and results were analyzed with Cell Quest Pro (BD Biosciences). Gatings were set according to isotype controls. The undifferentiated phenotype of hESCs was also established by immunohistochemistry using anti-Oct-4 antibody (1:200 dilution) (R&D Systems Inc., Minneapolis), visualized using the Universal Quick Kit with Nova Red (Vector Laboratories, Burlingame, CA) and by staining for alkaline phosphatase activity using a Black Alkaline Phosphatase Substrate Kit II (Vector Laboratories). Clonogenic growth of hESC-derived cells Aliquots of 10 × 103 to 100 × 103 cells were plated per 1 ml of semisolid methylcellulose (CFU-lite with Epo, Miltenyi Biotech, or complete human methycellulose medium, Stem Cell Technologies, Vancouver, BC, Canada). Frequency of colony-forming units-culture (CFU-C) was scored morphologically after culturing for 10 to 14 days at 37 °C, 5% CO2, in a humidified incubator. A serum-free semisolid medium with the same compositions as the erythroid-inducing medium stated above except for the addition of methylcellulose (BD Biosciences) to a final concentration of 1% was used to enumerate the frequency of burst-forming unit-erythroid (BFU-E). Results All hESC lines display similar undifferentiated phenotype The undifferentiated phenotype of the five individual hESC lines maintained on MEF feeders was confirmed by both flow cytometry and immunohistochemistry (Fig. 1 All five hESC lines express markers of three germ layers upon their differentiation To compare the differentiation properties of the five hESC lines, hESCs were first allowed to undergo spontaneous differentiation in a suspension culture for 14 days when large cystic EBs were harvested from all five hESC lines (Fig. 2A
To investigate the general germ-layer differentiation potential, samples were collected on day-5 (D5EB), day-14 (D14EB), and day-21 (D7Ad). The mRNA levels of AFP, NFH, BRACHYURY, and RENIN relative to GAPDH were quantified (Fig. 2C hESC lines exhibit striking differences in their GATA1 expression In addition to the general germ-layer markers, we also examined the expression dynamics of hematopoietic-specific transcripts including RUNX1, GATA2, SCL, and GATA1 (Fig. 2D Marked differences in the hematopoietic differentiation potential of five hESC lines The hematopoietic-specific development of hESCs was further assessed by flow cytometry. A panel of cell surface markers was analyzed (Fig. 3
The differences in hematopoietic differentiation potentials among the five hESC lines were confirmed by functional in vitro hematopoietic colony formation assay. H1 and BG02 gave rise to considerable numbers of CFU-GMs and BFU-Es at both differentiation stages (Fig. 4
Robust erythroid differentiation is achieved only by H1 and BG02 EBs were dissociated at day-7 and cultured under erythroid-inducing conditions for 10−15 days. At the end of the erythroid culture, there were no viable cells from hSF6, BG01, or BG03, whereas large numbers of hematopoietic-like cells in the H1 and BG02 culture could be observed under the microscope (data not shown). Flow cytometry analysis revealed that these cells were mostly erythroid as over 90% of them stained positive for Gly-A (Fig. 5A
Discussion Since the first article describing hESCs giving rise to hematopoietic colonies under specific conditions [21], much effort has been invested to improve the efficiency of directed hematopoietic differentiation of hESCs [14,15,41-44], as well as to characterize the hESC-derived hematopoietic cells [13,15,17,20,27,30,31,33,34,45]. While these studies provide both the foundation for therapeutic potential of hESCs and insight into the early events of human ontogenesis, it needs to be stressed that these data, with few exceptions [7-12], have been generated from H1, H7, and H9 lines, the three hESC lines derived by Thomson and colleagues, although over 200 hESC lines have been established. It has been shown recently that each of the hESC lines has its own unique transcriptional profile [38,46]; they may also differ significantly in their doubling time, transfection efficiency, long term culture stability [37], spontaneous differentiation patterns [47] and X-inactivation status [39,48]. Therefore, it is not clear whether the lack of hematopoietic differentiation data from other hESC lines is due to researchers focusing their resources on the few lines with proven records, or due to the fact that these data could not be reproduced using other lines. To address this issue, we tested the hematopoietic response of four hESC lines in addition to the commonly used H1 line. Our data showed that all five hESC lines expressed classic hESC markers prior to differentiation (Fig. 1 The differences between these two groups – lower CD34 and CD31 expression, and the absence of CD41 expression – were evident as early as day-14 during the spontaneous differentiation of hESCs (Fig. 3A The examination of hematopoietic-related transcription factors over the course of differentiation shed some light into the failed hematopoietic differentiation of the three hESC lines — hSF6, BG01, and BG03 (Fig. 2D Although the differential hematopoietic differentiation propensity of hESCs might be attributed to the different levels of SCL expression, the reasons for the lack of SCL induction remain to be resolved. It has been suggested that the differences observed among different hESC lines in different laboratories may be attributed to the adaptation of hESCs to different culture techniques as well as the accumulation of epigenetic modifications [3,55].As the five hESC lines tested in this study have been converted to a uniform propagation protocol [37], the impact of different passaging techniques on the differentiation potential of the hESC lines may be minimized. However, we acknowledge that epigenetic changes already in place prior to their conversion cannot be excluded. Since the hematopoietic differentiation potential of each line was tested multiple times over a wide range of passage numbers, the unique hematopoietic predisposition associated with each line appeared to be line-specific and not linked to the length of time each particular line has been cultured. However, the possibility that variants of certain lines maintained by other laboratories might behave differently cannot be excluded. Furthermore, as only one out of three lines from BresaGen generated substantial numbers of hematopoietic cells comparable to H1 from WiCell, the different approaches used for generating hESC lines from blastocysts by independent laboratories may not be solely responsible for the different characteristics of these lines. It is generally acknowledged that the quality of the embryos that the hESC lines derived from may have a fundamental impact on the characteristics of the hESC lines. The embryos that gave rise to H1 and hSF6 were labeled as surplus from IVF clinic, whereas those that gave rise to BG01, BG02, and BG03 were marked as of poor quality and to be discarded by the IVF clinic. Although it is impossible to evaluate the quality of these embryos to understand what might have caused the differences in their hematopoietic differentiation properties, insights could be obtained from murine ESCs. It has been reported that significant variations in their response to alterations in culture conditions also exist between independent murine ESC lines cultured under defined conditions [56]. Furthermore, the differentiation potential of murine hESCs varies between isogenic cell lines generated in the same laboratory and even varies between two lines derived from one single mechanically dissected ICM [57]. This difference has been attributed to the variations of leukemia inhibitory factor receptor protein levels in the ICM and then conferred to the ESC clones. Identification of similar markers expressed by undifferentiated hESCs may greatly facilitate detecting hESC lines suitable to be induced towards a hematopoietic pathway. While the wide variation in hematopoietic potentials among these five hESC lines is noted, it is equally important to point out that two of the lines (H1 and BG02) displayed remarkable similarities in terms of their hematopoietic marker expression, hematopoietic colony formation, erythroid differentiation, and globin expression patterns. These findings suggest that any hESC line capable of efficient hematopoietic differentiation may follow a preordained sequence of differentiation including the final globin expression program. Taken together, our data document that the similar characteristics shared by all hESC lines, such as the expression of Oct-4, SSEA-3, SSEA-4, and TRA-1−60 in their undifferentiated state [37,39], and the capability to form teratomas in vivo [39], do not necessarily translate into their ability to differentiate along any desired lineage. Each hESC line has a distinct hematopoietic differentiation potential that becomes readily apparent during their spontaneous differentiation. This predisposition appears to be line-specific and is independent of the passage number, gender karyotype, or the ability to form embryoid bodies and to initiate mesodermal differentiation. While hematopoietic cytokines can promote hematopoietic development in the lines predisposed to such development, they have limited to no effects on hESC lines that show little hematopoietic development during spontaneous differentiation. However, once hematopoietic differentiation advances, a predetermined differentiation sequence seems to be followed. 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