My NCBISign In
Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment
Anna Shevchenko, Assen Roguev, Daniel Schaft, Luke Buchanan, Bianca Habermann, Cagri Sakalar, Henrik Thomas, Nevan J Krogan, Andrej Shevchenko, A Francis Stewart
Genome Biol. 2008; 9(11): R167. Published online 2008 November 28. doi: 10.1186/gb-2008-9-11-r167
PMCID:
PMC2614481
Abstract Full Text PDF–920K Supplementary Material

Is Cited by the Following 29 Articles in this Archive:

Predicting the Fission Yeast Protein Interaction Network
Vera Pancaldi, Ömer S. Saraç, Charalampos Rallis, Janel R. McLean, Martin Převorovský, Kathleen Gould, Andreas Beyer, Jürg Bähler
G3 (Bethesda) 2012 April; 2(4): 453–467. Published online 2012 April 1. doi: 10.1534/g3.111.001560
PMCID:
PMC3337474
Abstract Full Text PDF–2.4M
Linking DNA replication checkpoint to MBF cell-cycle transcription reveals a distinct class of G1/S genes
Francisco M Bastos de Oliveira, Michael R Harris, Pijus Brazauskas, Robertus A M de Bruin, Marcus B Smolka
EMBO J. 2012 April 4; 31(7): 1798–1810. Published online 2012 February 14. doi: 10.1038/emboj.2012.27
PMCID:
PMC3321206
Free in PMC on 2013/04/04
The Double-Bromodomain Proteins Bdf1 and Bdf2 Modulate Chromatin Structure to Regulate S-Phase Stress Response in Schizosaccharomyces pombe
Mikael V. Garabedian, Chiaki Noguchi, Melissa A. Ziegler, Mukund M. Das, Tanu Singh, Logan J. Harper, Adam R. Leman, Lyne Khair, Bettina A. Moser, Toru M. Nakamura, Eishi Noguchi
Genetics. 2012 February; 190(2): 487–500. doi: 10.1534/genetics.111.135459
PMCID:
PMC3276636
Free in PMC on 2013/02/01
Genetic and Physical Interactions between Tel2 and the Med15 Mediator Subunit in Saccharomyces cerevisiae
Nathalie Grandin, Laetitia Corset, Michel Charbonneau
PLoS One. 2012; 7(1): e30451. Published online 2012 January 24. doi: 10.1371/journal.pone.0030451
PMCID:
PMC3265489
Abstract Full Text PDF–1.3M Supplementary Material
Widespread Cotranslational Formation of Protein Complexes
Caia D. S. Duncan, Juan Mata
PLoS Genet. 2011 December; 7(12): e1002398. Published online 2011 December 1. doi: 10.1371/journal.pgen.1002398
PMCID:
PMC3228823
Abstract Full Text PDF–293K Supplementary Material
Crumbs regulates rhodopsin transport by interacting with and stabilizing myosin V
Shirin Meher Pocha, Anna Shevchenko, Elisabeth Knust
J Cell Biol. 2011 November 28; 195(5): 827–838. doi: 10.1083/jcb.201105144
PMCID:
PMC3257572
Free in PMC on 2012/05/28
Evolution of the TOR Pathway
Teunis J. P. van Dam, Fried J. T. Zwartkruis, Johannes L. Bos, Berend Snel
J Mol Evol. 2011 October; 73(3-4): 209–220. Published online 2011 November 5. doi: 10.1007/s00239-011-9469-9
PMCID:
PMC3236823
Abstract Full Text PDF–523K Supplementary Material
Sch9 regulates ribosome biogenesis via Stb3, Dot6 and Tod6 and the histone deacetylase complex RPD3L
Alexandre Huber, Sarah L French, Hille Tekotte, Seda Yerlikaya, Michael Stahl, Mariya P Perepelkina, Mike Tyers, Jacques Rougemont, Ann L Beyer, Robbie Loewith
EMBO J. 2011 August 3; 30(15): 3052–3064. Published online 2011 July 5. doi: 10.1038/emboj.2011.221
PMCID:
PMC3160192
Free in PMC on 2012/08/03
Tra1 has specific regulatory roles, rather than global functions, within the SAGA co-activator complex
Dominique Helmlinger, Samuel Marguerat, Judit Villén, Danielle L Swaney, Steven P Gygi, Jürg Bähler, Fred Winston
EMBO J. 2011 July 20; 30(14): 2843–2852. Published online 2011 June 3. doi: 10.1038/emboj.2011.181
PMCID:
PMC3160243
Free in PMC on 2012/07/20
The Complete Spectrum of Yeast Chromosome Instability Genes Identifies Candidate CIN Cancer Genes and Functional Roles for ASTRA Complex Components
Peter C. Stirling, Michelle S. Bloom, Tejomayee Solanki-Patil, Stephanie Smith, Payal Sipahimalani, Zhijian Li, Megan Kofoed, Shay Ben-Aroya, Kyungjae Myung, Philip Hieter
PLoS Genet. 2011 April; 7(4): e1002057. Published online 2011 April 28. doi: 10.1371/journal.pgen.1002057
PMCID:
PMC3084213
Abstract Full Text PDF–710K Supplementary Material
Human Lysophosphatidylcholine Acyltransferases 1 and 2 Are Located in Lipid Droplets Where They Catalyze the Formation of Phosphatidylcholine
Christine Moessinger, Lars Kuerschner, Johanna Spandl, Andrej Shevchenko, Christoph Thiele
J Biol Chem. 2011 June 17; 286(24): 21330–21339. Published online 2011 April 15. doi: 10.1074/jbc.M110.202424
PMCID:
PMC3122193
Free in PMC on 2012/06/17
Adjacent Gene Pairing Plays a Role in the Coordinated Expression of Ribosome Biogenesis Genes MPP10 and YJR003C in Saccharomyces cerevisiae
James T. Arnone, Michael A. McAlear
Eukaryot Cell. 2011 January; 10(1): 43–53. doi: 10.1128/EC.00257-10
PMCID:
PMC3019797
Abstract Full Text PDF–1.4M
Genomic Expression Program Involving the Haa1p-Regulon in Saccharomyces cerevisiae Response to Acetic Acid
Nuno P. Mira, Jorg D. Becker, Isabel Sá-Correia
OMICS. 2010 October; 14(5): 587–601. doi: 10.1089/omi.2010.0048
PMCID:
PMC3125556
Abstract Full Text PDF–565K Supplementary Material
Activity of a C-terminal Plant Homeodomain (PHD) of Msc1 Is Essential for Function
Xinxing Qiu, Barbara E. Dul, Nancy C. Walworth
J Biol Chem. 2010 November 19; 285(47): 36828–36835. Published online 2010 September 21. doi: 10.1074/jbc.M110.157792
PMCID:
PMC2978611
Abstract Full Text Supplementary Material
Tel2 structure and function in the Hsp90-dependent maturation of mTOR and ATR complexes
Hiroyuki Takai, Yihu Xie, Titia de Lange, Nikola P. Pavletich
Genes Dev. 2010 September 15; 24(18): 2019–2030. doi: 10.1101/gad.1956410
PMCID:
PMC2939364
Abstract Full Text PDF–875K
Mutational analysis of the C-terminal FATC domain of Saccharomyces cerevisiae Tra1
Stephen M. T. Hoke, A. Irina Mutiu, Julie Genereaux, Stephanie Kvas, Michael Buck, Michael Yu, Gregory B. Gloor, Christopher J. Brandl
Curr Genet. 2010 October; 56(5): 447–465. Published online 2010 July 16. doi: 10.1007/s00294-010-0313-3
PMCID:
PMC2943577
Abstract Full Text PDF–1.1M Supplementary Material
A Genome-Scale DNA Repair RNAi Screen Identifies SPG48 as a Novel Gene Associated with Hereditary Spastic Paraplegia
Mikołaj Słabicki, Mirko Theis, Dragomir B. Krastev, Sergey Samsonov, Emeline Mundwiller, Magno Junqueira, Maciej Paszkowski-Rogacz, Joan Teyra, Anne-Kristin Heninger, Ina Poser, Fabienne Prieur, Jérémy Truchetto, Christian Confavreux, Cécilia Marelli, Alexandra Durr, Jean Philippe Camdessanche, Alexis Brice, Andrej Shevchenko, M. Teresa Pisabarro, Giovanni Stevanin, Frank Buchholz
PLoS Biol. 2010 June; 8(6): e1000408. Published online 2010 June 29. doi: 10.1371/journal.pbio.1000408
PMCID:
PMC2893954
Abstract Full Text PDF–2.2M Supplementary Material
PINCH1 regulates Akt1 activation and enhances radioresistance by inhibiting PP1α
Iris Eke, Ulrike Koch, Stephanie Hehlgans, Veit Sandfort, Fabio Stanchi, Daniel Zips, Michael Baumann, Anna Shevchenko, Christian Pilarsky, Michael Haase, Gustavo B. Baretton, Véronique Calleja, Banafshé Larijani, Reinhard Fässler, Nils Cordes
J Clin Invest. 2010 July 1; 120(7): 2516–2527. Published online 2010 June 7. doi: 10.1172/JCI41078
PMCID:
PMC2898588
Abstract Full Text PDF–3.3M Supplementary Material
Expression profiling of S. pombe acetyltransferase mutants identifies redundant pathways of gene regulation
Rebecca L Nugent, Anna Johnsson, Brian Fleharty, Madelaine Gogol, Yongtao Xue-Franzén, Chris Seidel, Anthony PH Wright, Susan L Forsburg
BMC Genomics. 2010; 11: 59. Published online 2010 January 22. doi: 10.1186/1471-2164-11-59
PMCID:
PMC2823694
Abstract Full Text PDF–2.0M Supplementary Material
Fission Yeast Iec1-Ino80-Mediated Nucleosome Eviction Regulates Nucleotide and Phosphate Metabolism
Cassandra Justine Hogan, Sofia Aligianni, Mickaël Durand-Dubief, Jenna Persson, William R. Will, Judith Webster, Linda Wheeler, Christopher K. Mathews, Sarah Elderkin, David Oxley, Karl Ekwall, Patrick Daniel Varga-Weisz
Mol Cell Biol. 2010 February; 30(3): 657–674. Published online 2009 November 23. doi: 10.1128/MCB.01117-09
PMCID:
PMC2812234
Abstract Full Text PDF–4.3M
An acetylated form of histone H2A.Z regulates chromosome architecture in Schizosaccharomyces pombe
Hyun-Soo Kim, Vincent Vanoosthuyse, Jeffrey Fillingham, Assen Roguev, Stephen Watt, Thomas Kislinger, Alex Treyer, Laura Rocco Carpenter, Christopher S. Bennett, Andrew Emili, Jack F. Greenblatt, Kevin G. Hardwick, Nevan J. Krogan, Jürg Bähler, Michael-Christopher Keogh
Nat Struct Mol Biol. Author manuscript; available in PMC 2010 June 1.
Published in final edited form as: Nat Struct Mol Biol. 2009 December; 16(12): 1286–1293. Published online 2009 November 15. doi: 10.1038/nsmb.1688
PMCID:
PMC2788674
Abstract Full Text PDF–4.7M Supplementary Material
The Schizosaccharomyces pombe JmjC-Protein, Msc1, Prevents H2A.Z Localization in Centromeric and Subtelomeric Chromatin Domains
Luke Buchanan, Mickaël Durand-Dubief, Assen Roguev, Cagri Sakalar, Brian Wilhelm, Annelie Strålfors, Anna Shevchenko, Rein Aasland, Andrej Shevchenko, Karl Ekwall, A. Francis Stewart
PLoS Genet. 2009 November; 5(11): e1000726. Published online 2009 November 13. doi: 10.1371/journal.pgen.1000726
PMCID:
PMC2770259
Abstract Full Text PDF–871K Supplementary Material
Histone Variant H2A.Z Regulates Centromere Silencing and Chromosome Segregation in Fission Yeast
Haitong Hou, Yu Wang, Scott P. Kallgren, James Thompson, John R. Yates, III, Songtao Jia
J Biol Chem. 2010 January 15; 285(3): 1909–1918. Published online 2009 November 12. doi: 10.1074/jbc.M109.058487
PMCID:
PMC2804349
Abstract Full Text Supplementary Material
Protein kinase A and TORC1 activate genes for ribosomal biogenesis by inactivating repressors encoded by Dot6 and its homolog Tod6
Soyeon I. Lippman, James R. Broach
Proc Natl Acad Sci U S A. 2009 November 24; 106(47): 19928–19933. Published online 2009 November 9. doi: 10.1073/pnas.0907027106
PMCID:
PMC2775034
Abstract Full Text PDF–7.2M Supplementary Material
A yeast killer toxin screen provides insights into A/B toxin entry, trafficking and killing mechanisms
Susheela Y. Carroll, Peter C. Stirling, Helen E. M. Stimpson, Esther Gießelmann, Manfred J. Schmitt, David G. Drubin
Dev Cell. Author manuscript; available in PMC 2010 October 20.
Published in final edited form as: Dev Cell. 2009 October 20; 17(4): 552–560. doi: 10.1016/j.devcel.2009.08.006
PMCID:
PMC2768656
Abstract Full Text PDF–2.8M Supplementary Material
Histone H2A.Z cooperates with RNAi and heterochromatin factors to suppress antisense RNAs
Martin Zofall, Tamás Fischer, Ke Zhang, Ming Zhou, Bowen Cui, Timothy D. Veenstra, Shiv I. S. Grewal
Nature. Author manuscript; available in PMC 2010 March 17.
Published in final edited form as: Nature. 2009 September 17; 461(7262): 419–422. Published online 2009 August 19. doi: 10.1038/nature08321
PMCID:
PMC2746258
Abstract Full Text PDF–2.1M Supplementary Material
Multiple histone modifications in euchromatin promote heterochromatin formation by redundant mechanisms in Saccharomyces cerevisiae
Kitty F Verzijlbergen, Alex W Faber, Iris JE Stulemeijer, Fred van Leeuwen
BMC Mol Biol. 2009; 10: 76. Published online 2009 July 28. doi: 10.1186/1471-2199-10-76
PMCID:
PMC2724485
Abstract Full Text PDF–1.9M
The histone deacetylase Rpd3p is required for transient changes in genomic expression in response to stress
Adriana L Alejandro-Osorio, Dana J Huebert, Dominic T Porcaro, Megan E Sonntag, Songdet Nillasithanukroh, Jessica L Will, Audrey P Gasch
Genome Biol. 2009; 10(5): R57. Published online 2009 May 26. doi: 10.1186/gb-2009-10-5-r57
PMCID:
PMC2718523
Abstract Full Text PDF–1.1M Supplementary Material
The functional importance of telomere clustering: Global changes in gene expression result from SIR factor dispersion
Angela Taddei, Griet Van Houwe, Shigeki Nagai, Ionas Erb, Erik van Nimwegen, Susan M. Gasser
Genome Res. 2009 April; 19(4): 611–625. doi: 10.1101/gr.083881.108
PMCID:
PMC2665780
Abstract Full Text PDF–1.8M
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