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Copyright © 2009, Journal of Zhejiang University Science Mycoplasma lipoproteins and Toll-like receptors*
Institute of Pathogenic Biology, School of Medicine, University of South China, Hengyang 421001, China ‡Corresponding Author †E-mail:yimouwu/at/sina.com Received August 23, 2008; Accepted December 1, 2008. Abstract Mycoplasmas, the smallest free-living, self-replicating bacteria with diameters of 200 to 800 nm, have been reported to be associated with human diseases. It is well known that the mycoplasma lipoprotein/peptide is able to modulate the host immune system, whose N-terminal structure is an important factor in inducing immunity and distinguishing Toll-like receptors (TLRs). However, there is still no clear elucidation about the pathogenic mechanism of mycoplasma lipoprotein/peptide and the signaling pathway. Some researchers have focused on understanding the structures of these proteins and the relationships between their structure and biological function. This review provides an update on the research in this field. Keywords: Mycoplasma lipoproteins/lipopeptides, Toll-like receptors, Signal pathway, Mycoplasmal pathogenic mechanism INTRODUCTION Mycoplasmas are physically the smallest bacteria and have the smallest genomes (580~2200 kb), with high A+T content (67%~76%) (You et al., 2006). With the basic genomes for survival, they have to derive most of their nutrients from host cells. Depending on the Mycoplasma species and respective hosts, these organisms can either occur as harmless commensals or cause inflammatory diseases, such as atypical pneumonia, nongonococcal urethritis, mastitis, salpingitis, and arthritis (Baseman and Tully, 1997). It is well known that mycoplasmas are wall-less bacteria, lacking the classical modulins such as lipopolysaccharide (LPS), lipoteichoic acid, and murein fragments (Henderson et al., 1996), but they are still potent activators of macrophages. One of the most important pathogenic elements is lipoproteins or lipopeptides (Feng and Lo, 1994; Mühlradt et al., 1998). To date, many mycoplasma lipoproteins or lipopeptides have been identified and studied, especially the Mycoplasma fermentans. Toll-like receptors (TLRs) are type I trans-membrane proteins that are evolutionarily conserved between insects and humans (Anderson, 2000). It is well known that TLRs are the important receptors for immune systems, especially for innate immunity (Lemaitre et al., 1996; Takeda et al., 2003). TLRs also play an important role in the mechanism of mycoplasma pathogenicity. MYCOPLASMA MEMBRANE LIPOPROTEINS Basic structure of the mycoplasma lipoprotein All membrane-anchored lipoproteins contain a lipoylated amino-terminal cysteinyl residue and proteins (Fig. (Fig.1).1
Categories and functions In the early 1990s, Mühlradt and Schade (1991) extracted a high-molecular-weight material (MDHM) from M. fermentans and found that it could activate the macrophages’ release of interleukin-6 (IL-6) and increase the synthesis of cell-associated IL-1. Lipid-associated membrane proteins (LAMPs) have been found in different Mycoplasma species, such as P68 from M. bovis and P60 from M. capricolum. There are three forms of mycoplasma lipoproteins/peptides identified from M. fermentans, named macrophage-activating lipoprotein 2 (MALP-2), P48, and M161Ag (identical to MALP-404). M161Ag is a 43-kDa M. fermentans lipoprotein of 428 amino acids with a signal sequence (Matsumoto et al., 1997), which is secreted as a 404-amino acid protein with a palmitoylated lipid anchor through posttranslational modification (Mühlradt et al., 1996; Matsumoto et al., 1997; Takeuchi et al., 2000). The P48 gene is 99% identical to the encoding of M161Ag. They have the similar N-terminal 114 amino acids including the 24-amino acid signal peptide, but diverge into distinct proteins by their respective C-terminal 315 and 71 amino acids. One common mycoplasma lipoprotein is a 2-kDa lipoprotein termed MALP-2. It has been found that the amino acid sequence of this lipopeptide (S-(2,3-bisacyloxypropyl)-cysteine-GNNDESNISFKEK) is entirely consistent with the N-terminal amino acid sequences of M161Ag and P48 (Mühlradt et al., 1997). It has also been found that the MALP-induced activation of intracellular signaling molecules is fully dependent on both TLR2 and myeloid differentiation primary response gene 88 (MyD88) (Takeuchi et al., 2000). In addition to what has been introduced above, some other lipoproteins modulating host immune system have been also identified. For example, the N-terminal lipopeptide of a 44-kDa membrane-bound lipoprotein of M. salivarium is the active entity, whose structure was very similar to that of S-(2,3-bis-palmitoyloxypropyl)-cysteine-GDPKHPKSF (Shibata et al., 2000). M. arthritidis is a 41-kDa moiety and dependent on TLR2 and differentiation 14 (CD14) (Hasebe et al., 2007). Shimizu et al.(2005) found that the diacylated lipoprotein, F0F1-type ATPase (F0F1-ATPase), derived from M. pneumoniae, activated nuclear factors-kappaB (NF-κB) through TLR1, TLR2, and TLR6, but two more lipoproteins, N-ALP1 and N-ALP2, did that through TLR1 and TLR2, but not TLR6 (Shimizu et al., 2007). Among the three lipoproteins, F0F1-ATPase might be a key molecule in inducing acute inflammatory responses in the lungs of mice (Shimizu et al., 2008a). As another common mycoplasma that causes diseases in human, Ureaplasma parvum has been examined to have several lipoproteins, such as P75 and P55 containing UU012 and UU016, respectively. They were found to activate NF-κB through TLR1, TLR2, and TLR6, and to induce tumor necrosis factor-α (TNF-α) production in mouse peritoneal macrophages (Shimizu et al., 2008b). All of these lipoproteins serve as potent cytokine inducers for monocytes/macrophages and have cytolytic activity. It was proven that the M161Ag could induce maturation of dendritic cells (DCs) and activate host complement on affected cells. The TLR2 mediated stimulation by MALP-2-induced cyclo-oxygenase 2 (COX-2) and prostaglandin E2 (PGE2) in human placental trophoblast cells via NF-κB and mitogen activated protein (MAP) kinase pathways (Mitsunari et al., 2006). TOLL-LIKE RECEPTORS AND IMMUNITY TLRs and their sub-cellular location In 1997, the first human homologue of the Drosophila protein Toll was identified. Thirteen members of the TLR family have been identified in mammals and are responsible for recognizing pathogens as diverse as gram-positive and gram-negative bacteria, viruses, and fungi, as well as protozoa (Takeda et al., 2003). Among these TLRs, TLR1~TLR10 are functional in humans; however, TLR7 and TLR10 have no known natural ligands (Hasan et al., 2005), and TLR11 is a pseudogene (Zhang et al., 2004). TLRs recognize various conserved pathogen-associated molecules, including triacylated lipoproteins (TLR1, TLR2), diacylated lipoproteins (TLR2, TLR6), double-stranded (DS) RNA (TLR3), LPS (TLR4), flagellin (TLR5), single-stranded (SS) RNA (TLR7, TLR8) (Kawai and Akira, 2007), and unmethylated DNA (TLR9) (Liu et al., 2007). Binding with their own ligands, TLRs recruit signaling molecules to their intracellular signaling domains, leading to the activation of the NF-κB and the secretion of proinflammatory cytokines (Triantafilou et al., 2006). Individual TLRs have different locations in cells. For example, TLR1, TLR2, and TLR4 are expressed on the cell surface, which has been confirmed by positive staining of the cell surface by specific antibodies. In contrast, TLR3, TLR7, TLR8, and TLR9 have been shown to be expressed in intracellular fractions, such as endosomes (Heil et al., 2003; Matsumoto et al., 2003; Latz et al., 2004). It has been reported that TLR3-, TLR7-, or TLR9-mediated recognition of their ligands requires endosomal maturation (Heil et al., 2004; Funami et al., 2004). Whether the TLR is on or in the cell, studies have shown that either phagosomal/lysosomal or endosomal/lysomal compartments may be the main sites for TLR recognition of microbial components (Latz et al., 2004; Leifer et al., 2004; Underhill et al., 1999). Structure and function of the TLRs The TLRs are type I integral membrane glycoproteins with molecular weights ranging from 90 to 115 kDa. TLRs are related to IL-1 receptors (IL-1Rs), based on the similarity in the cytoplasmic portions (designated the Toll-IL-1R, or TIR, domain), but the extra-cellular portions of TLRs and IL-1Rs are quite different. The extra-cellular portion of TLRs contains leucine-rich repeats (LRRs), whereas IL-1Rs contain three immunoglobulin-like domains. With regard to the structure, TLRs have three domains: extra-cellular, trans-membrane, and cytoplasmic regions (Gay and Gangloff, 2008). The TLR extra-cellular domain (ectodomain) consists of three discrete secondary structural elements: the LRRs, N-capping and C-capping structures (West et al., 2006) (Fig. (Fig.2).2
Each LRR has a short β-sheet region, and a more variable secondary structure (Fig. (Fig.2).2 The TLR ectodomains are connected to the cytoplasm by a hydrophobic trans-membrane sequence of about 22 amino acids, which probably form an α-helix. A short linker connects the C-terminal capping structure of the ectodomain and the membrane. However, on the cytoplasmic side of the membrane, there is a much longer linker connecting the trans-membrane sequence to the first secondary structure element of the TIR domain, varying from 20 amino acids in TLR4 to 30 amino acids in TLR5. The TIR domain consists of about 200 amino acids and folds into an α-β structure similar to that of the bacterial chemotaxis protein Che Y. It can be divided into two groups. The first group consists of type I trans-membrane receptors, the 10 TLRs and IL-1 family. They function in the second phase of the innate immune response. The second group constitutes the five signaling adapters for the TLRs, i.e., MyD88 adaptor-like/TIR-associated protein (Mal/TIRAP), MyD88, sterile-alpha and armadillo motif containing protein (SARM), TIR domain-containing adaptor inducing IFN-β (TRIF), and TRIF-related adaptor molecule (TRAM) (O′Neill et al., 2003). MyD88 functions as a critical adaptor for signaling pathway of TLR1/2/6, TLR5, and TLR7~TLR9. TRIF is an adaptor for TLR3 and TLR4 (Yamamoto et al., 2003). In all, the TIR domain has evolved as a general protein-protein interaction domain that later acquired some specialized functions in development and in immune processes. Signaling pathways of TLRs The signaling pathways associated with each TLR are not identical and may result in different biological responses, such as antigen-presenting cell (APC) activation, DCs maturation, and B cell activation (Anders et al., 2004). It is well known that there exist MyD88-dependent and -independent signaling pathways of TLRs. Here, MyD88-dependent signaling pathway related to mycoplasma lipopeptide-induced signaling pathway shall be introduced. After ligand binding, the intracellular adaptor molecule MyD88 is recruited to the receptor complex (Medzhitov et al., 1998; Muzio et al., 1998). MyD88 has a C-terminal TIR domain that mediates its homophilic interaction with the receptor and an N-terminal death domain that engages the death domain of its downstream target IL-1 receptor-associated kinase (IRAK) (Wesche et al., 1997). IRAK1 and IRAK4 join the receptor complex, which involves in the phosphorylation and activation of TNF receptor-associated factor 6 (TRAF6). In contrast, IRAK-M lacks kinase activity and plays different roles. IRAK-M negatively regulates TLR signaling by preventing dissociation of phosphorylated IRAK1 and IRAK4 from MyD88. Upon dimerization, TRAF6 forms a complex with Ubc13 and Uev1A, both of which facilitate lysine 63 ubiquitination of TRAF6 (Chen, 2005). Ub-TRAF6 then binds and phosphorylates another complex composed of transforming growth factor-activated kinase 1 (TAK1) and TAK1-binding proteins 1 and 2. Once it is activated, TAK1 in turn activates IκB kinase (IKK), p38, and c-Jun N-terminal kinase (JNK). JNK induces activator protein-1 (AP-1) activation (Wang et al., 2001). IKK phosphorylates IκB, an NF-κB inhibitor, and leads to its ubiquitination and degradation, unmasking the nuclear localization domain of NF-κB. Freed NF-κB translocates into the nucleus and turns on the transcription of multiple proinflammatory genes, including TNF-α, IL-1, and IL-6 (Cook et al., 2004; Kawai and Akira, 2005). Similar to the NF-κB pathway, TAK1 activates mitogen-activated protein kinase (MAPK) pathways, and leads to the expression of multiple proinflammatory genes. INTERACTION BETWEEN MYCOPLASMA LIPOPROTEIN AND TLRS Signaling pathway triggered by mycoplasma lipoproteins through TLRs It has been shown that the treatment with proteinase K fails to decrease the activity of M. fermentans and M. penetrans, while the treatment of lipoprotein lipase decreases the ability to induce NF-κB. This suggests that the active components are attributed to lipid moieties, although the moieties of proteins might have other functions (Shimizu et al., 2004). The acylated proteins of mycoplasmas are abundant cell-surface antigens, which are recognized by extra-cellular domains of TLRs. As described above, LRRs on each TLR can recognize different ligands. The extra-cellular regions of Ser40-Ile64 and leucine residues at positions 107, 112, and 115 in a LRR motif of TLR2 are involved in the recognition of mycoplasmal diacylated lipoproteins and lipopeptides (Fujita et al., 2003). So, we could conclude that LRRs on TLR1 or TLR6 discriminate the diacylated and triacylated lipoproteins. When the signal arrives at the TIR region of the cytoplasmic domain through a much longer linker connecting the trans-membrane sequence to the TIR domain, it forms a receptor complex activating the signaling pathways of TLRs. It was found that the MALP-induced activation of intracellular signaling molecules was fully dependent on both TLR2 and MyD88 (Takeuchi et al., 2000), and that TLR2-mediated stimulation by MALP-2 induced COX-2 and PGE2 in human placental trophoblast cells via NF-κB and MAPK pathways. Another finding is that domain-negative forms of MyD88 and Fas-associated protein with death domain (FADD), but not IRAK-4, reduced the cytocidal activity of the mycoplasma lipoproteins in transfected-HEK293 and the forms also down-regulated the activation of both NF-κB and caspase 8. Also, a selective inhibitor of p38 MAPK attenuated the cytocidal activity sufficiently in mycoplasmal membrane diacylated lipoproteins inducer tests. It could be concluded that mycoplasmal membrane diacylated lipoproteins not only initiate proinflammatory responses through TLR2 and TLR6 via the activation of the transcriptional factor NF-κB as an early event, but also initiate apoptotic responses as a latter event (Into et al., 2004). Cooperative interactions among TLRs Studies have focused more on cooperation of TLR2 and TLR6 or TLR1 to recognize the varied Mycoplasma species. Takeuchi et al.(2001) found that TLR6-deficient cells did not produce any inflammatory cytokines in response to mycoplasma-derived diacylated lipoproteins, but retained their normal response to triacylated lipopeptides of other bacterial origins. Experiments demonstrated that TLR6 cooperates with TLR2 to recognize diacylated lipoprotein, and to discriminate between the N-terminal lipoylated structures of MALP-2 and lipopeptides derived from other bacteria. Lipopeptides from M. salivarium got a different activation toward the human acute monocytic leukemia cell line (THP-1). It is suggested that both the fatty acids of diacylglycerol and the amino acid sequence of the peptide portion are indispensable for TLR2/6-mediated signaling, and the size of the peptide portion of lipopeptide affects the recognition of the lipopeptide by TLR2/6 (Okusawa et al., 2004). In contrast, TLR1-deficient cells show a normal response to mycoplasma-derived diacylated lipopeptides, but an impaired response to triacylated lipopeptides. Shimizu et al.(2004) found that the purified lipoprotein of M. penetrans LAMPs was able to activate NF-κB through TLR1 and TLR2. On the other hand, the activation of NF-κB by the purified lipoproteins of M. fermentans LAMPs was mediated through TLR2 and TLR6, but not TLR1. These results indicate that M. fermentans LAMPs may contain several active components, one of which is recognized by TLR2 and TLR6, while other components might be recognized by TLR1 and TLR2. Another finding is the existence of adjacent receptors for mycoplasma lipoproteins in Mycoplasma species. For example, Hoebe et al.(2005) put forth the opinion that TLR2/6 heterodimers require cluster of differentiation 36 (CD36) to sense diacylated lipoproteins, whereas TLR1/2 heterodimers do not. Almost at the same time, the findings by Hasebe et al.(2007) showed that four macrophage-activating components from M. arthritidis were dependent on TLR2 and cluster of CD14. M. tuberculosis, M. leprae, and M. bovis Bacille Calmette-Guerin (BCG) all activated adaptive immune by triggering dendritic cell-specific intercellular adhesion molecule-3-grabbing non-integrin (DC-SIGN)- and TLR-signal pathways on DCs (Gringhuis et al., 2007). Besides, the Dectin-1 was reported to be a co-receptor of TLR2, which recognized the biosynthetic lipoprotein, Pam3CSK4, on DCs (Gantner et al., 2003). In these adjacent receptors, CD14 is necessary for the recognition of triacylated lipoproteins by TLR1 and TLR2, but not for that of diacylated lipoproteins. For other Mycoplasmas species, a triacylated pattern is necessary but not sufficient to render a lipopeptide TLR1-dependent, and a diacylation pattern is necessary but not sufficient to render a lipopeptide TLR6-dependent (Buwitt-Beckmann et al., 2006). These results show the importance of the amide-bound acyl residue, the two ester-bound acyl residues, and the amino acid sequence of the peptide chain within lipoproteins for the induction of signaling through TLR2 hetero- or homo-dimers. Another explanation for the discrimination of diacylated or triacylated lipoproteins from TLR structures is the LRR domains. Omueti et al.(2005) have shown that LRR9~LRR12 of human TLR1 and TLR6 mediate the ability to discriminate between acylated lipoproteins, as the domain exchange between the two receptors alters lipopeptide responsiveness in transfected cells. Additionally, Grabiec et al.(2004) showed that LRR7~LRR10 of TLR2 were critical for responses to tri-lauroylated lipopeptides. In 2007, Jin et al.(2007), by using the hybrid LRR technique as previously described (Kim et al., 2007), revealed the mode of lipopeptide binding to TLR1 and TLR2 heterodimer, which provided a structural explanation for why both TLR1 and TLR2 are required for triacylated lipopeptide binding and signaling. It is well known that the diacylated glyceryl is attached to the N-terminal cysteine via a thioether bond, and that the third lipid chain is connected to the cysteine via an amide bond in triacylated lipoproteins. When triacylated lipoproteins bound to the complex of TLR1 and TLR2, TLR1 channel and TLR2 pocket were connected at the dimer interface and the two C-terminal domains covered in the middle, shaping a form of the letter “m”. And then the two ester-bound lipid chains were inserted into the TLR2 pocket in extended conformation, and the amide-bound lipid chain was exposed to the outside of the pocket and inserted into a narrow channel in TLR1. As for TLR6, it does not contain the lipid-binding channel analyzed by modeling the structure of TLR6 with an automatic homology modeling server using the TLR1 structure as template (Tosatto, 2005). Therefore, the amide-bound lipid chain of the triacylated lipopeptide cannot interact with TLR6 so as to initiate signaling through the TLR2 and TLR6 complex. Apoptosis and mycoplasmas lipoproteins Aliprantis et al.(1999) found several bacterial lipoproteins could induce apoptosis in both transfected HEK293 and THP-1 monocytic cells through TLR2. It also appears that apoptosis induced by TLR2 signaling involves an interaction between the death domain of MyD88 and the TNF-pathway-component FADD, leading in turn to the activation of caspase 8. Brightbill et al.(1999) could not observe cell death in HEK293, suggesting that the activation of apoptosis is sensitive to culture conditions and the nature of the treatment. As described above, mycoplasma lipoproteins triggered TLR2- and TLR6-mediated events leading to activation of NF-κB and apoptosis. The apoptosis was regulated by p38 MAPK, MyD88, and FADD. Into and Shibata (2005) examined roles of apoptosis signal-regulating kinase (ASK1), an upstream activator of p38 MAPK, in TLR2 signaling. They found that a kinase-inactive mutant of ASK1 impaired the sustained phosphorylation of p38 MAPK induced by mycoplasma lipoproteins and also attenuated mycoplasma lipoprotein-induced transcriptional activities of NF-κB and activatorprotein-1 (AP-1) by inhibition of p38 MAPK activation. Mycoplasma lipoprotein-induced cell death, including DNA fragmentation and caspase 3/7 activation, was also down-regulated by the ASK1 mutant by p38 MAPK inhibition. Different experiments have shown some controversial evidence that mycoplasmal infections inhibit apoptosis. For example, Gerlic et al. (2007) found M. fermentans inhibits TNF-α-induced apoptosis in the human myelomonocytic U937 cell line; its effect is upstream of mitochondria and upstream of caspase 8. And their further study showed that the M. fermentans lipoproteins could inhibit the apoptosis induced by TNF-α in U937 cells. One possible explanation for these seemingly contradictory conclusions is that HEK293 cells over-express the function of TLRs and may exaggerate the activation of apoptosis using mycoplasma lipoproteins as inducers. Another explanation is that other components of mycoplasmas may exist to inhibit the apoptosis through other signal pathways. CONCLUSION AND PERSPECTIVES The mycoplasma lipoproteins play a key role in infection, although some of them do not cause clinical symptoms in humans. They are important factors in the inflammation process and are probably also involved in leukocyte recruitment to the infected tissue. Their ability to undergo size or phase variation at a high frequency appears to be a means of adapting to different conditions, including the host’s immune response. The conjugation, diacylated or triacylated lipopeptides, and the size of the C-terminal sequence have the effect on the immunity through TLRs. Some studies have revealed the basic structure, signaling pathway, and cooperation functions of TLRs in innate immune reactions. Over-expression studies are often used to know about the function of signal transduction molecules, but sometimes their results can be mislieading. Canparent to it, using knockout mice or RNA interference might get better results. Also, the sample components should be highly purified and synthetic compounds be used whenever possible, so that the interaction between mycoplasma lipoproteins and TLRs in vitro will be better examined (Akira et al., 2001). As for structural biology research, more X-ray crystallography and NMR spectroscopy studies are necessary to evaluate the interaction. The current understanding of the cellular mechanisms involved in the TLR-mediated anti-mycoplasmas activity is minimal, and the signaling pathway of TLRs is still elusive. However, as long as researchers continue to explore and understand the biological structure and components of mycoplasma lipoproteins and TLR proteins, it will be possible to develop strategies to obtain antibodies or vaccines for defense. Footnotes *Project (No. 30770115) supported by the National Natural Science Foundation of China References 1. Akira S, Takeda K, Kaisho T. Toll-like receptors: critical proteins linking innate and acquired immunity. Nat Immunol. 2001;2(8):675–680. doi: 10.1038/90609. [PubMed] 2. Aliprantis AO, Yang RB, Mark MR, Suggett S, Devaux B, Radolf JD, Klimpel GR, Godowski P, Zychlinsky A. Cell activation and apoptosis by bacterial lipoproteins through Toll-like receptor-2. Science. 1999;285(5428):736–739. doi: 10.1126/science.285.5428.736. [PubMed] 3. Anders HJ, Banas B, Schlondorff D. Signaling danger: Toll-like receptors and their potential roles in kidney disease. J Am Soc Nephrol. 2004;15(4):854–867. doi: 10.1097/01.ASN.0000121781.89599.16. [PubMed] 4. Anderson KV. Toll signaling pathways in the innate immune response. Curr Opin Immunol. 2000;12(1):13–19. doi: 10.1016/S0952-7915(99)00045-X. [PubMed] 5. Baseman JB, Tully JG. Mycoplasmas: sophisticated, reemerging, and burdened by their notoriety. Emerg Infect Dis. 1997;3(1):21–32. [PubMed] 6. Bell JK, Botos I, Hall PR, Askins J, Shiloach J, Segal DM, Davies DR. The molecular structure of the Toll-like receptor 3 ligand-binding domain. Proc Natl Acad Sci USA. 2005;102(31):10976–10980. doi: 10.1073/pnas.0505077102. [PubMed] 7. Brightbill HD, Libraty DH, Krutzik SR, Yang RB, Belisle JT, Bleharski JR, Maitland M, Norgard MV, Plevy SE, Smale ST, et al. Host defense mechanisms triggered by microbial lipoproteins through Toll-like receptors. Science. 1999;285(5428):732–736. doi: 10.1126/science.285.5428.732. [PubMed] 8. Buwitt-Beckmann U, Heine H, Wiesmüller KH, Jung G, Brock R, Akira S, Ulmer AJ. TLR1- and TLR6-independent recognition of bacterial lipopeptides. J Biol Chem. 2006;281(14):9049–9057. doi: 10.1074/jbc.M512525200. [PubMed] 9. Chambaud I, Wróblewski H, Blanchard A. Interactions between mycoplasma lipoproteins and the host immune system. Trends Microbiol. 1999;7(12):493–499. doi: 10.1016/S0966-842X(99)01641-8. [PubMed] 10. Chen ZJ. Ubiquitin signalling in the NF-kappaB pathway. Nat Cell Biol. 2005;7(8):758–765. doi: 10.1038/ncb0805-758. [PubMed] 11. Cook DN, Pisetsky DS, Schwartz DA. Toll-like receptors in the pathogenesis of human disease. Nat Immunol. 2004;5(10):975–979. doi: 10.1038/ni1116. [PubMed] 12. Feng SH, Lo SC. Induced mouse spleen B-cell proliferation and secretion of immunoglobulin by lipid-associated membrane proteins of Mycoplasma fermentans incognitus and Mycoplasma penetrans
. Infect Immun. 1994;62(9):3916–3921. [PubMed] 13. Fraser CM, Gocayne JD, White O, Adams MD, Clayton RA, Fleischmann RD, Bult CJ, Kerlavage AR, Sutton G, Kelley JM, et al. The minimal gene complement of Mycoplasma genitalium
. Science. 1995;270(5235):397–403. doi: 10.1126/science.270.5235.397. [PubMed] 14. Fraser CM, Casjens S, Huang WM, Sutton GG, Clayton R, Lathigra R, White O, Ketchum KA, Dodson R, Hickey EK, et al. Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi
. Nature. 1997;390(6660):580–586. doi: 10.1038/37551. [PubMed] 15. Fujita M, Into T, Yasuda M, Okusawa T, Hamahira S, Kuroki Y, Eto A, Nisizawa T, Morita M, Shibata K. Involvement of leucine residues at positions 107, 112, and 115 in a leucine-rich repeat motif of human Toll-like receptor 2 in the recognition of diacylated lipoproteins and lipopeptides and Staphylococcus aureus peptidoglycans. J Immunol. 2003;171(7):3675–3683. [PubMed] 16. Funami K, Matsumoto M, Oshiumi H, Akazawa T, Yamamoto A, Seya T. The cytoplasmic ‘linker region’ in Toll-like receptor 3 controls receptor localization and signaling. Int Immunol. 2004;16(8):1143–1154. doi: 10.1093/intimm/dxh115. [PubMed] 17. Gantner BN, Simmons RM, Canavera SJ, Akira S, Underhill DM. Collaborative induction of inflammatory responses by dectin-1 and Toll-like receptor 2. J Exp Med. 2003;197(9):1107–1117. doi: 10.1084/jem.20021787. [PubMed] 18. Gay NJ, Gangloff M. Structure and function of Toll receptors and their ligands. Annu Rev Biochem. 2007;76(1):141–165. doi: 10.1146/annurev.biochem.76.060305.151318. [PubMed] 19. Gay NJ, Gangloff M. Handbook of Experimental Pharmacology. Vol. 183. Springer Berlin Heidelberg; 2008. Structure of Toll-like Receptors; pp. 181–200. 20. Gerlic M, Horowitz J, Farkash S, Horowitz S. The inhibitory effect of Mycoplasma fermentans on tumor necrosis factor (TNF)-alpha-induced apoptosis resides in the membrane lipoproteins. Cell Microbiol. 2007;9(1):142–153. doi: 10.1111/j.1462-5822.2006.00774.x. [PubMed] 21. Grabiec A, Meng G, Fichte S, Bessler W, Wagner H, Kirschning CJ. Human but not murine Toll-like receptor 2 discriminates between tri-palmitoylated and tri-lauroylated peptides. J Biol Chem. 2004;279(46):48004–48012. doi: 10.1074/jbc.M405311200. [PubMed] 22. Gringhuis SI, den Dunnen J, Litjens M, van Het Hof B, van Kooyk Y, Geijtenbeek TB. C-type lectin DC-SIGN modulates Toll-like receptor signaling via Raf-1 kinase-dependent acetylation of transcription factor NF-kappaB. Immunity. 2007;26(5):605–616. doi: 10.1016/j.immuni.2007.03.012. [PubMed] 23. Hasan U, Chaffois C, Gaillard C, Saulnier V, Merck E, Tancredi S, Guiet C, Brière F, Vlach J, Lebecque S, et al. Human TLR10 is a functional receptor, expressed by B cells and plasmacytoid dendritic cells, which activates gene transcription through MyD88. J Immunol. 2005;174(5):2942–2950. [PubMed] 24. Hasebe A, Mu HH, Washburn LR, Chan FV, Pennock ND, Taylor ML, Cole BC. Inflammatory lipoproteins purified from a toxigenic and arthritogenic strain of Mycoplasma arthritidis are dependent on Toll-like receptor 2 and CD14. Infect Immun. 2007;75(4):1820–1826. doi: 10.1128/IAI.00516-06. [PubMed] 25. Heil F, Ahmad-Nejad P, Hemmi H, Hochrein H, Ampenberger F, Gellert T, Dietrich H, Lipford G, Takeda K, Akira S, et al. The Toll-like receptor 7 (TLR7)-specific stimulus loxoribine uncovers a strong relationship within the TLR7, 8 and 9 subfamily. Eur J Immunol. 2003;33(11):2987–2997. doi: 10.1002/eji.200324238. [PubMed] 26. Heil F, Hemmi H, Hochrein H, Ampenberger F, Kirschning C, Akira S, Lipford G, Wagner H, Bauer S. Species-specific recognition of single-stranded RNA via Toll-like receptor 7 and 8. Science. 2004;303(5663):1526–1529. doi: 10.1126/science.1093620. [PubMed] 27. Henderson B, Poole S, Wilson M. Bacterial modulins: a novel class of virulence factors which cause host tissue pathology by inducing cytokine synthesis. Microbiol Rev. 1996;60(2):316–341. [PubMed] 28. Himmelreich R, Hilbert H, Plagens H, Pirkl E, Li BC, Herrmann R. Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae
. Nucleic Acids Res. 1996;24(22):4420–4449. doi: 10.1093/nar/24.22.4420. [PubMed] 29. Hoebe K, Georgel P, Rutschmann S, Du X, Mudd S, Crozat K, Sovath S, Shamel L, Hartung T, Zähringer U, et al. CD36 is a sensor of diacylglycerides. Nature. 2005;433(7025):523–527. doi: 10.1038/nature03253. [PubMed] 30. Huizinga EG, Tsuji S, Romijn RAP, Schiphorst ME, de Groot PG, Sixma JJ, Gros P. Structures of glycoprotein Ib alpha and its complex with von Willebrand factor A1 domain. Science. 2002;297(5584):1176–1179. doi: 10.1126/science.107355. [PubMed] 31. Into T, Shibata K. Apoptosis signal-regulating kinase 1-mediated sustained p38 mitogen-activated protein kinase activation regulates mycoplasmal lipoprotein- and staphylococcal peptidoglycan-triggered Toll-like receptor 2 signalling pathways. Cell Microbiol. 2005;7(9):1305–1317. doi: 10.1111/j.1462-5822.2005.00558.x. [PubMed] 32. Into T, Kiura K, Yasuda M, Kataoka H, Inoue N, Hasebe A, Takeda K, Akira S, Shibata K. Stimulation of human Toll-like receptor (TLR) 2 and TLR6 with membrane lipoproteins of Mycoplasma fermentans induces apoptotic cell death after NF-kappaB activation. Cell Microbiol. 2004;6(2):187–199. doi: 10.1046/j.1462-5822.2003.00356.x. [PubMed] 33. Jan G, Fontenelle C, Le Hénaff M, Wróblewski H. Acylation and immunological properties of Mycoplasma gallisepticum membrane proteins. Res Microbiol. 1995;146(9):739–750. doi: 10.1016/0923-2508(96)81070-9. [PubMed] 34. Jan G, Brenner C, Wróblewski H. Purification of Mycoplasma gallisepticum membrane proteins p52, p67 (pMGA), and p77 by high-performance liquid chromatography. Protein Expr Purif. 1996;7(2):160–166. doi: 10.1006/prep.1996.0023. [PubMed] 35. Jin MS, Kim SE, Heo JY, Lee ME, Kim HM, Paik SG, Lee H, Lee JO. Crystal structure of the TLR1-TLR2 heterodimer induced by binding of a tri-acylated lipopeptide. Cell. 2007;130(6):1071–1082. doi: 10.1016/j.cell.2007.09.008. [PubMed] 36. Kawai T, Akira S. Toll-like receptor downstream signaling. Arthritis Res Ther. 2005;7(1):12–19. doi: 10.1186/ar1469. [PubMed] 37. Kawai T, Akira S. Signaling to NF-kappaB by Toll-like receptors. Trends Mol Med. 2007;13(11):460–469. doi: 10.1016/j.molmed.2007.09.002. [PubMed] 38. Kim HM, Park BS, Kim JI, Kim SE, Lee J, Oh SC, Enkhbayar P, Matsushima N, Lee H, Yoo OJ, et al. Crystal structure of the TLR4-MD-2 complex with bound endotoxin antagonist Eritoran. Cell. 2007;130(5):906–917. doi: 10.1016/j.cell.2007.08.002. [PubMed] 39. Latz E, Schoenemeyer A, Visintin A, Fitzgerald KA, Monks BG, Knetter CF, Lien E, Nilsen NJ, Espevik T, Golenbock DT. TLR9 signals after translocating from the ER to CpG DNA in the lysosome. Nat Immunol. 2004;5(2):190–198. doi: 10.1038/ni1028. [PubMed] 40. Leifer CA, Kennedy MN, Mazzoni A, Lee C, Kruhlak MJ, Segal DM. TLR9 is localized in the endoplasmic reticulum prior to stimulation. J Immunol. 2004;173(2):1179–1183. [PubMed] 41. Lemaitre B, Nicolas E, Michaut L, Reichhart JM, Hoffmann JA. The dorsoventral regulatory gene cassette spätzle/Toll/cactus controls the potent antifungal response in Drosophila adults. Cell. 1996;86(6):973–983. doi: 10.1016/S0092-8674(00)80172-5. [PubMed] 42. Liu PT, Krutzik SR, Modlin RL. Therapeutic implications of the TLR and VDR partnership. Trends Mol Med. 2007;13(3):117–124. doi: 10.1016/j.molmed.2007.01.006. [PubMed] 43. Matsumoto M, Takeda J, Inoue N, Hara T, Hatanaka M, Takahashi K, Nagasawa S, Akedo H, Seya T. A novel protein that participates in nonself discrimination of malignant cells by homologous complement. Nat Med. 1997;3:1266–1270. doi: 10.1038/nm1197-1266. [PubMed] 44. Matsumoto M, Funami K, Tanabe M, Oshiumi H, Shingai M, Seto Y, Yamamoto A, Seya T. Subcellular localization of Toll-like receptor 3 in human dendritic cells. J Immunol. 2003;171(6):3154–3162. [PubMed] 45. Medzhitov R, Preston-Hurlburt P, Kopp E, Stadlen A, Chen C, Ghosh S, Janeway CAJ. MyD88 is an adaptor protein in the hToll/IL-1 receptor family signaling pathways. Mol Cell. 1998;2(2):253–258. doi: 10.1016/S1097-2765(00)80136-7. [PubMed] 46. Mitsunari M, Yoshida S, Shoji T, Tsukihara S, Iwabe T, Harada T, Terakawa N. Macrophage-activating lipopeptide-2 induces cyclooxygenase-2 and prostaglandin E(2) via Toll-like receptor 2 in human placental trophoblast cells. J Reprod Immunol. 2006;72(1-2):46–59. doi: 10.1016/j.jri.2006.02.003. [PubMed] 47. Mühlradt PF, Schade U. MDHM, a macrophage-stimulatory product of Mycoplasma fermentans, leads to in vitro interleukin-1 (IL-1), IL-6, tumor necrosis factor, and prostaglandin production and is pyrogenic in rabbits. Infect Immun. 1991;59(11):3969–3974. [PubMed] 48. Mühlradt PF, Meyer H, Jansen R. Identification of S-(2,3-dihydroxypropyl) cystein in a macrophage-activating lipopeptide from Mycoplasma fermentans
. Biochemistry. 1996;35(24):7781–7786. doi: 10.1021/bi9602831. [PubMed] 49. Mühlradt PF, Kiess M, Meyer H, Süssmuth R, Jung G. Isolation, structure elucidation, and synthesis of a macrophage stimulatory lipopeptide from Mycoplasma fermentans acting at picomolar concentration. J Exp Med. 1997;185(11):1951–1958. doi: 10.1084/jem.185.11.1951. [PubMed] 50. Mühlradt PF, Kiess M, Meyer H, Süssmuth R, Jung G. Structure and specific activity of macrophage-stimulating lipopeptides from Mycoplasma hyorhinis
. Infect Immun. 1998;66(10):4804–4810. [PubMed] 51. Muzio M, Natoli G, Saccani S, Levrero M, Mantovani A. The human Toll signaling pathway: divergence of nuclear factor kappaB and JNK/SAPK activation upstream of tumor necrosis factor receptor-associated factor 6 (TRAF6). J Exp Med. 1998;187(12):2097–2101. doi: 10.1084/jem.187.12.2097. [PubMed] 52. Nishitani C, Mitsuzawa H, Sano H, Shimizu T, Matsushima N, Kuroki Y. Toll-like receptor 4 region Glu24-Lys47 is a site for MD-2 binding: importance of CYS29 and CYS40. J Biol Chem. 2006;281(50):38322–38329. doi: 10.1074/jbc.M606904200. [PubMed] 53. Okusawa T, Fujita M, Nakamura J, Into T, Yasuda M, Yoshimura A, Hara Y, Hasebe A, Golenbock DT, Morita M, et al. Relationship between structures and biological activities of mycoplasmal diacylated lipopeptides and their recognition by Toll-like receptors 2 and 6. Infect Immun. 2004;72(3):1657–1665. doi: 10.1128/IAI.72.3.1657-1665.2004. [PubMed] 54. Omueti KO, Beyer JM, Johnson CM, Lyle EA, Tapping RI. Domain exchange between human Toll-like receptors 1 and 6 reveals a region required for lipopeptide discrimination. J Biol Chem. 2005;280(44):36616–36625. doi: 10.1074/jbc.M504320200. [PubMed] 55. O′Neill LAJ, Fitzgerald KA, Bowie AG. The Toll-IL-1 receptor adaptor family grows to five members. Trends in Immunol. 2003;24:287–290. doi: 10.1016/S1471-4906(03)00115-7. 56. Shibata K, Hasebe A, Into T, Yamada M, Watanabe T. The N-terminal lipopeptide of a 44-kDa membrane-bound lipoprotein of Mycoplasma salivarium is responsible for the expression of intercellular adhesion molecule-1 on the cell surface of normal human gingival fibroblasts. J Immunol. 2000;165:6538–6544. [PubMed] 57. Shimizu T, Kida Y, Kuwano K. Lipid-associated membrane proteins of Mycoplasma fermentans and M. penetrans activate human immunodeficiency virus long-terminal repeats through Toll-like receptors. Immunology. 2004;113(1):121–129. doi: 10.1111/j.1365-2567.2004.01937.x. [PubMed] 58. Shimizu T, Kida Y, Kuwano K. A dipalmitoylated lipoprotein from Mycoplasma pneumoniae activates NF-kappaB through TLR1, TLR2, and TLR6. J Immunol. 2005;175(7):4641–4646. [PubMed] 59. Shimizu T, Kida Y, Kuwano K. Triacylated lipoproteins derived from Mycoplasma pneumoniae activate nuclear factor-kappaB through Toll-like receptors 1 and 2. Immunology. 2007;121(4):473–483. doi: 10.1111/j.1365-2567.2007.02594.x. [PubMed] 60. Shimizu T, Kida Y, Kuwano K.
Mycoplasma pneumoniae-derived lipopeptides induce acute inflammatory responses in the lungs of mice. Infect Immun. 2008;76(1):270–277. doi: 10.1128/IAI.00955-07. [PubMed] 61. Shimizu T, Kida Y, Kuwano K. Ureaplasma parvum lipoproteins, including MB antigen, activate NF-κB through TLR1, TLR2 and TLR6. Microbiology. 2008;154(5):1318–1325. doi: 10.1099/mic.0.2007/016212-0. [PubMed] 62. Takeda K, Kaisho T, Akira S. Toll-like receptors. Annu Rev Immunol. 2003;21(1):335–376. doi: 10.1146/annurev.immunol.21.120601.141126. [PubMed] 63. Takeuchi O, Kaufmann A, Grote K, Kawai T, Hoshino K, Morr M, Mühlradt PF, Akira S. Cutting edge: preferentially the R-stereoisomer of the mycoplasmal lipopeptide macrophage-activating lipopeptide-2 activates immune cells through a Toll-like receptor 2- and MyD88-dependent signaling pathway. J Immunol. 2000;164(2):554–557. [PubMed] 64. Takeuchi O, Kawai T, Mühlradt PF, Morr M, Radolf JD, Zychlinsky A, Takeda K, Akira S. Discrimination of bacterial lipoproteins by Toll-like receptor 6. Int Immunol. 2001;13(7):933–940. doi: 10.1093/intimm/13.7.933. [PubMed] 65. Tosatto SC. The victor/FRST function for model quality estimation. J Comput Biol. 2005;12(10):1316–1327. doi: 10.1089/cmb.2005.12.1316. [PubMed] 66. Triantafilou M, Gamper FG, Haston RM, Mouratis MA, Morath S, Hartung T, Triantafilou K. Membrane sorting of Toll-like receptor (TLR)-2/6 and TLR2/1 heterodimers at the cell surface determines heterotypic associations with CD36 and intracellular targeting. J Biol Chem. 2006;281(41):31002–31011. doi: 10.1074/jbc.M602794200. [PubMed] 67. Underhill DM, Ozinsky A, Hajjar AM, Stevens A, Wilson CB, Bassetti M, Aderem A. The Toll-like receptor 2 is recruited to macrophage phagosomes and discriminates between pathogens. Nature. 1999;401(6755):811–815. doi: 10.1038/44605. [PubMed] 68. Wang C, Deng L, Hong M, Akkaraju GR, Inoue J, Chen ZJ. TAK1 is a ubiquitin-dependent kinase of MKK and IKK. Nature. 2001;412(6844):346–351. doi: 10.1038/35085597. [PubMed] 69. Wesche H, Henzel WJ, Shillinglaw W, Li S, Cao Z. MyD88: an adapter that recruits IRAK to the IL-1 receptor complex. Immunity. 1997;7(6):837–847. doi: 10.1016/S1074-7613(00)80402-1. [PubMed] 70. West AP, Koblansky AA, Ghosh S. Recognition and signaling by Toll-like receptors. Annu Rev Cell Dev Biol. 2006;22(1):409–437. doi: 10.1146/annurev.cellbio.21.122303.115827. [PubMed] 71. Yamamoto M, Sato S, Hemmi H, Hoshino K, Kaisho T, Sanjo H, Takeuchi O, Sugiyama M, Okabe M, Takeda K, et al. Role of adaptor TRIF in the MyD88-independent Toll-like receptor signaling pathway. Science. 2003;301(5633):640–643. doi: 10.1126/science.1087262. [PubMed] 72. You XX, Zeng YH, Wu YM. Interactions between mycoplasma lipid-associated membrane proteins and the host cells. J Zhejiang Univ Sci B. 2006;7(5):342–350. doi: 10.1631/jzus.2006.B0342. [PubMed] 73. Zhang D, Zhang G, Hayden MS, Greenblatt MB, Bussey C, Flavell RA, Ghosh S. A Toll-like receptor that prevents infection by uropathogenic bacteria. Science. 2004;303(5663):1522–1526. doi: 10.1126/science.1094351. [PubMed] |
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J Zhejiang Univ Sci B. 2006 May; 7(5):342-50.
[J Zhejiang Univ Sci B. 2006]Emerg Infect Dis. 1997 Jan-Mar; 3(1):21-32.
[Emerg Infect Dis. 1997]Microbiol Rev. 1996 Jun; 60(2):316-41.
[Microbiol Rev. 1996]Infect Immun. 1994 Sep; 62(9):3916-21.
[Infect Immun. 1994]Infect Immun. 1998 Oct; 66(10):4804-10.
[Infect Immun. 1998]Protein Expr Purif. 1996 Mar; 7(2):160-6.
[Protein Expr Purif. 1996]J Exp Med. 1997 Jun 2; 185(11):1951-8.
[J Exp Med. 1997]Science. 1995 Oct 20; 270(5235):397-403.
[Science. 1995]Nucleic Acids Res. 1996 Nov 15; 24(22):4420-49.
[Nucleic Acids Res. 1996]Nature. 1997 Dec 11; 390(6660):580-6.
[Nature. 1997]Trends Microbiol. 1999 Dec; 7(12):493-9.
[Trends Microbiol. 1999]Infect Immun. 1991 Nov; 59(11):3969-74.
[Infect Immun. 1991]Nat Med. 1997 Nov; 3(11):1266-70.
[Nat Med. 1997]Biochemistry. 1996 Jun 18; 35(24):7781-6.
[Biochemistry. 1996]J Immunol. 2000 Jan 15; 164(2):554-7.
[J Immunol. 2000]J Exp Med. 1997 Jun 2; 185(11):1951-8.
[J Exp Med. 1997]J Immunol. 2000 Dec 1; 165(11):6538-44.
[J Immunol. 2000]Infect Immun. 2007 Apr; 75(4):1820-6.
[Infect Immun. 2007]J Immunol. 2005 Oct 1; 175(7):4641-6.
[J Immunol. 2005]Immunology. 2007 Aug; 121(4):473-83.
[Immunology. 2007]Infect Immun. 2008 Jan; 76(1):270-7.
[Infect Immun. 2008]J Reprod Immunol. 2006 Dec; 72(1-2):46-59.
[J Reprod Immunol. 2006]Annu Rev Immunol. 2003; 21():335-76.
[Annu Rev Immunol. 2003]J Immunol. 2005 Mar 1; 174(5):2942-50.
[J Immunol. 2005]Science. 2004 Mar 5; 303(5663):1522-6.
[Science. 2004]Trends Mol Med. 2007 Nov; 13(11):460-9.
[Trends Mol Med. 2007]Trends Mol Med. 2007 Mar; 13(3):117-24.
[Trends Mol Med. 2007]J Biol Chem. 2006 Oct 13; 281(41):31002-11.
[J Biol Chem. 2006]Eur J Immunol. 2003 Nov; 33(11):2987-97.
[Eur J Immunol. 2003]J Immunol. 2003 Sep 15; 171(6):3154-62.
[J Immunol. 2003]Nat Immunol. 2004 Feb; 5(2):190-8.
[Nat Immunol. 2004]Science. 2004 Mar 5; 303(5663):1526-9.
[Science. 2004]Annu Rev Cell Dev Biol. 2006; 22():409-37.
[Annu Rev Cell Dev Biol. 2006]Proc Natl Acad Sci U S A. 2005 Aug 2; 102(31):10976-80.
[Proc Natl Acad Sci U S A. 2005]Annu Rev Biochem. 2007; 76():141-65.
[Annu Rev Biochem. 2007]Science. 2002 Aug 16; 297(5584):1176-9.
[Science. 2002]J Biol Chem. 2006 Dec 15; 281(50):38322-9.
[J Biol Chem. 2006]Science. 2003 Aug 1; 301(5633):640-3.
[Science. 2003]J Am Soc Nephrol. 2004 Apr; 15(4):854-67.
[J Am Soc Nephrol. 2004]Mol Cell. 1998 Aug; 2(2):253-8.
[Mol Cell. 1998]J Exp Med. 1998 Jun 15; 187(12):2097-101.
[J Exp Med. 1998]Immunity. 1997 Dec; 7(6):837-47.
[Immunity. 1997]Nat Cell Biol. 2005 Aug; 7(8):758-65.
[Nat Cell Biol. 2005]Immunology. 2004 Sep; 113(1):121-9.
[Immunology. 2004]J Immunol. 2003 Oct 1; 171(7):3675-83.
[J Immunol. 2003]J Immunol. 2000 Jan 15; 164(2):554-7.
[J Immunol. 2000]Cell Microbiol. 2004 Feb; 6(2):187-99.
[Cell Microbiol. 2004]Int Immunol. 2001 Jul; 13(7):933-40.
[Int Immunol. 2001]Infect Immun. 2004 Mar; 72(3):1657-65.
[Infect Immun. 2004]Immunology. 2004 Sep; 113(1):121-9.
[Immunology. 2004]Nature. 2005 Feb 3; 433(7025):523-7.
[Nature. 2005]Infect Immun. 2007 Apr; 75(4):1820-6.
[Infect Immun. 2007]Immunity. 2007 May; 26(5):605-16.
[Immunity. 2007]J Exp Med. 2003 May 5; 197(9):1107-17.
[J Exp Med. 2003]J Biol Chem. 2006 Apr 7; 281(14):9049-57.
[J Biol Chem. 2006]Cell. 2007 Sep 21; 130(6):1071-82.
[Cell. 2007]Cell. 2007 Sep 7; 130(5):906-17.
[Cell. 2007]J Comput Biol. 2005 Dec; 12(10):1316-27.
[J Comput Biol. 2005]Science. 1999 Jul 30; 285(5428):736-9.
[Science. 1999]Science. 1999 Jul 30; 285(5428):732-6.
[Science. 1999]Cell Microbiol. 2005 Sep; 7(9):1305-17.
[Cell Microbiol. 2005]Cell Microbiol. 2007 Jan; 9(1):142-53.
[Cell Microbiol. 2007]Nat Immunol. 2001 Aug; 2(8):675-80.
[Nat Immunol. 2001]