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Unraveling the biochemistry and provenance of pupylation: a prokaryotic analog of ubiquitination
Lakshminarayan M Iyer, AM Burroughs, L Aravind
Biol Direct. 2008; 3: 45. Published online 2008 November 3. doi: 10.1186/1745-6150-3-45
PMCID:
PMC2588565
Abstract Full Text PDF–1.8M Supplementary Material

Is Cited by the Following 13 Articles in this Archive:

Reconstitution of the Mycobacterium tuberculosis pupylation pathway in Escherichia coli
Francisca A Cerda-Maira, Fiona McAllister, Nadine J Bode, Kristin E Burns, Steven P Gygi, K Heran Darwin
EMBO Rep. 2011 August; 12(8): 863–870. Published online 2011 July 8. doi: 10.1038/embor.2011.109
PMCID:
PMC3147258
Free in PMC on 2012/08/01
A Conserved 20S Proteasome Assembly Factor Requires a C-terminal HbYX Motif for Proteasomal Precursor Binding
Andrew R. Kusmierczyk, Mary J. Kunjappu, Roger Y. Kim, Mark Hochstrasser
Nat Struct Mol Biol. Author manuscript; available in PMC 2011 November 1.
Published in final edited form as: Nat Struct Mol Biol. 2011 May; 18(5): 622–629. Published online 2011 April 17. doi: 10.1038/nsmb.2027
PMCID:
PMC3087856
Abstract Full Text PDF–1.6M Supplementary Material
Mycobacterial Ubiquitin-like Protein Ligase PafA Follows a Two-step Reaction Pathway with a Phosphorylated Pup Intermediate
Ethan Guth, Michael Thommen, Eilika Weber-Ban
J Biol Chem. 2011 February 11; 286(6): 4412–4419. Published online 2010 November 16. doi: 10.1074/jbc.M110.189282
PMCID:
PMC3039397
Abstract Full Text
Molecular Analysis of the Prokaryotic Ubiquitin-Like Protein (Pup) Conjugation Pathway in Mycobacterium tuberculosis
Francisca A. Cerda-Maira, Michael J. Pearce, Michele Fuortes, William R. Bishai, Stevan R. Hubbard, K. Heran Darwin
Mol Microbiol. Author manuscript; available in PMC 2011 September 1.
Published in final edited form as: Mol Microbiol. 2010 September; 77(5): 1123–1135. doi: 10.1111/j.1365-2958.2010.07276.x
PMCID:
PMC2975802
Abstract Full Text PDF–3.0M Supplementary Material
Dop functions as a depupylase in the prokaryotic ubiquitin-like modification pathway
Frank Imkamp, Frank Striebel, Markus Sutter, Dennis Özcelik, Natalie Zimmermann, Peter Sander, Eilika Weber-Ban
EMBO Rep. 2010 October; 11(10): 791–797. Published online 2010 August 27. doi: 10.1038/embor.2010.119
PMCID:
PMC2948181
Abstract Full Text PDF–658K Supplementary Material
“Depupylation” of prokaryotic ubiquitin-like protein from mycobacterial proteasome substrates
Kristin E. Burns, Francisca A. Cerda-Maira, Tao Wang, Huilin Li, William R. Bishai, K. Heran Darwin
Mol Cell. Author manuscript; available in PMC 2011 September 10.
Published in final edited form as: Mol Cell. 2010 September 10; 39(5): 821–827. Published online 2010 August 12. doi: 10.1016/j.molcel.2010.07.019
PMCID:
PMC2939144
Abstract Full Text PDF–503K Supplementary Material
Proteome-wide identification of mycobacterial pupylation targets
Christian Poulsen, Yusuf Akhter, Amy Hye-Won Jeon, Gerold Schmitt-Ulms, Helmut E Meyer, Anja Stefanski, Kai Stühler, Matthias Wilmanns, Young-Hwa Song
Mol Syst Biol. 2010; 6: 386. Published online 2010 July 13. doi: 10.1038/msb.2010.39
PMCID:
PMC2925521
Abstract Full Text PDF–799K Supplementary Material
Origin of the cell nucleus, mitosis and sex: roles of intracellular coevolution
Thomas Cavalier-Smith
Biol Direct. 2010; 5: 7. Published online 2010 February 4. doi: 10.1186/1745-6150-5-7
PMCID:
PMC2837639
Abstract Full Text PDF–2.3M
Expansion of the mycobacterial “PUPylome”
Jeramie Watrous, Kristin Burns, Wei-Ting Liu, Anand Patel, Vivian Hook, Vineet Bafna, Clifton E. Barry 3rd, Steve Bark, Pieter C. Dorrestein
Mol Biosyst. Author manuscript; available in PMC 2010 March 29.
Published in final edited form as: Mol Biosyst. 2010 February; 6(2): 376–385. Published online 2009 November 16. doi: 10.1039/b916104j
PMCID:
PMC2846642
Abstract Full Text PDF–1000K Supplementary Material
Amidoligases with ATP-grasp, glutamine synthetase-like and acetyltransferase-like domains: synthesis of novel metabolites and peptide modifications of proteins
Lakshminarayan M. Iyer, Saraswathi Abhiman, A. Maxwell Burroughs, L. Aravind
Mol Biosyst. Author manuscript; available in PMC 2012 January 29.
Published in final edited form as: Mol Biosyst. 2009 December; 5(12): 1636–1660. Published online 2009 October 13. doi: 10.1039/b917682a
PMCID:
PMC3268129
Abstract Full Text PDF–5.5M Supplementary Material
The Mycobacterium tuberculosis Proteasome: More Than Just a Barrel-shaped Protease
Francisca Cerda-Maira, K. Heran Darwin
Microbes Infect. Author manuscript; available in PMC 2010 December 1.
Published in final edited form as: Microbes Infect. 2009 December; 11(14-15): 1150–1155. Published online 2009 August 9. doi: 10.1016/j.micinf.2009.08.003
PMCID:
PMC2788230
Abstract Full Text PDF–380K
Reconstructing the ubiquitin network - cross-talk with other systems and identification of novel functions
Thiago M Venancio, S Balaji, Lakshminarayan M Iyer, L Aravind
Genome Biol. 2009; 10(3): R33. Published online 2009 March 30. doi: 10.1186/gb-2009-10-3-r33
PMCID:
PMC2691004
Abstract Full Text PDF–1.8M Supplementary Material
Origin and Function of Ubiquitin-like Protein Conjugation
Mark Hochstrasser
Nature. Author manuscript; available in PMC 2010 March 26.
Published in final edited form as: Nature. 2009 March 26; 458(7237): 422. doi: 10.1038/nature07958
PMCID:
PMC2819001
Abstract Full Text PDF–1.7M
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