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The transcriptional program underlying the physiology of clostridial sporulation
Shawn W Jones, Carlos J Paredes, Bryan Tracy, Nathan Cheng, Ryan Sillers, Ryan S Senger, Eleftherios T Papoutsakis
Genome Biol. 2008; 9(7): R114. Published online 2008 July 16. doi: 10.1186/gb-2008-9-7-r114
PMCID:
PMC2530871
Abstract Full Text PDF–3.9M Supplementary Material

Is Cited by the Following 17 Articles in this Archive:

Metabolome Remodeling during the Acidogenic-Solventogenic Transition in Clostridium acetobutylicum
Daniel Amador-Noguez, Ian A. Brasg, Xiao-Jiang Feng, Nathaniel Roquet, Joshua D. Rabinowitz
Appl Environ Microbiol. 2011 November; 77(22): 7984–7997. doi: 10.1128/AEM.05374-11
PMCID:
PMC3209008
Abstract Full Text PDF–3.2M Supplementary Material
SpoIIE Is Necessary for Asymmetric Division, Sporulation, and Expression of σF, σE, and σG but Does Not Control Solvent Production in Clostridium acetobutylicum ATCC 824
Changhao Bi, Shawn W. Jones, Daniel R. Hess, Bryan P. Tracy, Eleftherios T. Papoutsakis
J Bacteriol. 2011 October; 193(19): 5130–5137. doi: 10.1128/JB.05474-11
PMCID:
PMC3187438
Abstract Full Text PDF–827K Supplementary Material
The Key Sigma Factor of Transition Phase, SigH, Controls Sporulation, Metabolism, and Virulence Factor Expression in Clostridium difficile
Laure Saujet, Marc Monot, Bruno Dupuy, Olga Soutourina, Isabelle Martin-Verstraete
J Bacteriol. 2011 July; 193(13): 3186–3196. doi: 10.1128/JB.00272-11
PMCID:
PMC3133256
Abstract Full Text PDF–550K Supplementary Material
Inactivation of σF in Clostridium acetobutylicum ATCC 824 Blocks Sporulation Prior to Asymmetric Division and Abolishes σE and σG Protein Expression but Does Not Block Solvent Formation
Shawn W. Jones, Bryan P. Tracy, Stefan M. Gaida, Eleftherios T. Papoutsakis
J Bacteriol. 2011 May; 193(10): 2429–2440. doi: 10.1128/JB.00088-11
PMCID:
PMC3133174
Abstract Full Text PDF–2.7M Supplementary Material
Multiple orphan histidine kinases interact directly with Spo0A to control the initiation of endospore formation in Clostridium acetobutylicum
Elisabeth Steiner, Angel E. Dago, Danielle I. Young, John T. Heap, Nigel P. Minton, James A. Hoch, Michael Young
Mol Microbiol. Author manuscript; available in PMC 2012 May 1.
Published in final edited form as: Mol Microbiol. 2011 May; 80(3): 641–654. Published online 2011 March 14. doi: 10.1111/j.1365-2958.2011.07608.x
PMCID:
PMC3097173
Abstract Full Text PDF–1.7M Supplementary Material
Comparative genomic and transcriptomic analysis revealed genetic characteristics related to solvent formation and xylose utilization in Clostridium acetobutylicum EA 2018
Shiyuan Hu, Huajun Zheng, Yang Gu, Jingbo Zhao, Weiwen Zhang, Yunliu Yang, Shengyue Wang, Guoping Zhao, Sheng Yang, Weihong Jiang
BMC Genomics. 2011; 12: 93. Published online 2011 February 2. doi: 10.1186/1471-2164-12-93
PMCID:
PMC3044671
Abstract Full Text PDF–1.4M Supplementary Material
Small RNAs in the Genus Clostridium
Yili Chen, Dinesh C. Indurthi, Shawn W. Jones, Eleftherios T. Papoutsakis
mBio. 2011 Jan-Feb; 2(1): e00340-10. Published online 2011 January 25. doi: 10.1128/mBio.00340-10
PMCID:
PMC3025663
Abstract Full Text PDF–1.8M Supplementary Material
Formic Acid Triggers the “Acid Crash” of Acetone-Butanol-Ethanol Fermentation by Clostridium acetobutylicum
Shaohua Wang, Yanping Zhang, Hongjun Dong, Shaoming Mao, Yan Zhu, Runjiang Wang, Guodong Luan, Yin Li
Appl Environ Microbiol. 2011 March; 77(5): 1674–1680. Published online 2011 January 7. doi: 10.1128/AEM.01835-10
PMCID:
PMC3067271
Abstract Full Text PDF–607K
Inactivation of σE and σG in Clostridium acetobutylicum Illuminates Their Roles in Clostridial-Cell-Form Biogenesis, Granulose Synthesis, Solventogenesis, and Spore Morphogenesis
Bryan P. Tracy, Shawn W. Jones, Eleftherios T. Papoutsakis
J Bacteriol. 2011 March; 193(6): 1414–1426. Published online 2011 January 7. doi: 10.1128/JB.01380-10
PMCID:
PMC3067626
Abstract Full Text PDF–2.8M Supplementary Material
Hierarchical evolution of the bacterial sporulation network
Michiel JL de Hoon, Patrick Eichenberger, Dennis Vitkup
Curr Biol. Author manuscript; available in PMC 2011 September 14.
Published in final edited form as: Curr Biol. 2010 September 14; 20(17): R735–R745. doi: 10.1016/j.cub.2010.06.031
PMCID:
PMC2944226
Abstract Full Text PDF–1.7M Supplementary Material
Evaluating the Involvement of Alternative Sigma Factors SigF and SigG in Clostridium perfringens Sporulation and Enterotoxin Synthesis
Jihong Li, Bruce A. McClane
Infect Immun. 2010 October; 78(10): 4286–4293. Published online 2010 July 19. doi: 10.1128/IAI.00528-10
PMCID:
PMC2950359
Abstract Full Text PDF–1.4M
A proteomic and transcriptional view of acidogenic and solventogenic steady-state cells of Clostridium acetobutylicum in a chemostat culture
Holger Janssen, Christina Döring, Armin Ehrenreich, Birgit Voigt, Michael Hecker, Hubert Bahl, Ralf-Jörg Fischer
Appl Microbiol Biotechnol. 2010 August; 87(6): 2209–2226. Published online 2010 July 9. doi: 10.1007/s00253-010-2741-x
PMCID:
PMC3227527
Abstract Full Text PDF–618K Supplementary Material
A genomic-library based discovery of a novel, possibly synthetic, acid-tolerance mechanismin Clostridium acetobutylicum involving non-coding RNAs and ribosomal RNA processing
Jacob R. Borden, Shawn W. Jones, Dinesh Indurthi, Yili Chen, Eleftherios Terry Papoutsakis
Metab Eng. Author manuscript; available in PMC 2011 May 1.
Published in final edited form as: Metab Eng. 2010 May; 12(3): 268–281. Published online 2010 January 6. doi: 10.1016/j.ymben.2009.12.004
PMCID:
PMC2857598
Abstract Full Text PDF–1.7M Supplementary Material
Genomics, evolution, and crystal structure of a new family of bacterial spore kinases
Eric D Scheeff, Herbert L Axelrod, Mitchell D Miller, Hsiu-Ju Chiu, Ashley M Deacon, Ian A Wilson, Gerard Manning
Proteins. 2010 May 1; 78(6): 1470–1482. Published online 2009 November 24. doi: 10.1002/prot.22663
PMCID:
PMC2860764
Abstract Full Text PDF–1.2M
Sporulation and Enterotoxin (CPE) Synthesis Are Controlled by the Sporulation-Specific Sigma Factors SigE and SigK in Clostridium perfringens
Kathryn H. Harry, Ruanbao Zhou, Lee Kroos, Stephen B. Melville
J Bacteriol. 2009 April; 191(8): 2728–2742. Published online 2009 February 6. doi: 10.1128/JB.01839-08
PMCID:
PMC2668419
Abstract Full Text PDF–1.0M Supplementary Material
Development and Application of Flow-Cytometric Techniques for Analyzing and Sorting Endospore-Forming Clostridia
Bryan P. Tracy, Stefan M. Gaida, Eleftherios T. Papoutsakis
Appl Environ Microbiol. 2008 December; 74(24): 7497–7506. Published online 2008 October 17. doi: 10.1128/AEM.01626-08
PMCID:
PMC2607168
Abstract Full Text PDF–1.4M Supplementary Material
Transcriptional Analysis of Clostridium beijerinckii NCIMB 8052 and the Hyper-Butanol-Producing Mutant BA101 during the Shift from Acidogenesis to Solventogenesis
Zhen Shi, Hans P. Blaschek
Appl Environ Microbiol. 2008 December; 74(24): 7709–7714. Published online 2008 October 10. doi: 10.1128/AEM.01948-08
PMCID:
PMC2607153
Abstract Full Text PDF–650K Supplementary Material
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